RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 M0R378 163 aa8.48□□□□□ -1.05
NPHP4-202ENST00000378161 IGHV4-59P01825 116 aa8.48□□□□□ -1.05
NPHP4-202ENST00000378161 TRAV22A0A0B4J277 110 aa8.47□□□□□ -1.05
NPHP4-202ENST00000378161 ERC2-IT1O76042 136 aa8.47□□□□□ -1.05
NPHP4-202ENST00000378161 PRR9Q5T870 116 aa8.47□□□□□ -1.05
NPHP4-202ENST00000378161 LMO4P61968 165 aa8.47□□□□□ -1.05
NPHP4-202ENST00000378161 DEFB112Q30KQ8 113 aa8.47□□□□□ -1.05
NPHP4-202ENST00000378161 ESM1Q9NQ30 184 aa8.47□□□□□ -1.05
NPHP4-202ENST00000378161 CASC2Q6XLA1 102 aa8.47□□□□□ -1.05
NPHP4-202ENST00000378161 Q6ZTI0 123 aa8.47□□□□□ -1.05
NPHP4-202ENST00000378161 FAM30AQ9NZY2 134 aa8.47□□□□□ -1.05
NPHP4-202ENST00000378161 CELA1Q9UNI1 258 aa8.47□□□□□ -1.05
NPHP4-202ENST00000378161 FASNP49327 2511 aaKnown RBP8.46□□□□□ -1.05
NPHP4-202ENST00000378161 EPG5Q9HCE0 2579 aa8.46□□□□□ -1.06
NPHP4-202ENST00000378161 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
NPHP4-202ENST00000378161 LINC00467Q9BRT7 94 aa8.45□□□□□ -1.06
NPHP4-202ENST00000378161 Q8N814 137 aa8.45□□□□□ -1.06
NPHP4-202ENST00000378161 JMJD1CQ15652 2540 aa8.45□□□□□ -1.06
NPHP4-202ENST00000378161 LINC00337Q8N6G1 96 aa8.45□□□□□ -1.06
NPHP4-202ENST00000378161 IBA57-AS1B1ANH7 110 aa8.44□□□□□ -1.06
NPHP4-202ENST00000378161 CCL18P55774 89 aa8.44□□□□□ -1.06
NPHP4-202ENST00000378161 IGHV4-30-2A0A087WSY4 118 aa8.43□□□□□ -1.06
NPHP4-202ENST00000378161 A6NDX4 124 aa8.43□□□□□ -1.06
NPHP4-202ENST00000378161 TRBV6-8A0A0A6YYG3 113 aa8.43□□□□□ -1.06
NPHP4-202ENST00000378161 IGHV4-28A0A0C4DH34 117 aa8.43□□□□□ -1.06
NPHP4-202ENST00000378161 EPM2AB3EWF7 344 aa8.43□□□□□ -1.06
NPHP4-202ENST00000378161 Q1T7F1 81 aa8.43□□□□□ -1.06
NPHP4-202ENST00000378161 HTN3P15516 51 aa8.43□□□□□ -1.06
NPHP4-202ENST00000378161 FAM229BQ4G0N7 80 aa8.43□□□□□ -1.06
NPHP4-202ENST00000378161 DIRC1Q969H9 104 aa8.43□□□□□ -1.06
NPHP4-202ENST00000378161 MYO15AQ9UKN7 3530 aa8.42□□□□□ -1.06
NPHP4-202ENST00000378161 C6orf99Q4VX62 202 aa8.42□□□□□ -1.06
NPHP4-202ENST00000378161 ABCA12Q86UK0 2595 aa8.42□□□□□ -1.06
NPHP4-202ENST00000378161 FRYLO94915 3013 aa8.42□□□□□ -1.06
NPHP4-202ENST00000378161 C11orf71Q6IPW1 123 aa8.42□□□□□ -1.06
NPHP4-202ENST00000378161 DEFB130BP0DP73 79 aa8.41□□□□□ -1.06
NPHP4-202ENST00000378161 DEFB130AP0DP74 79 aa8.41□□□□□ -1.06
NPHP4-202ENST00000378161 CLPSL1A2RUU4 121 aa8.41□□□□□ -1.06
NPHP4-202ENST00000378161 MRGPRG-AS1Q2M3A8 158 aa8.41□□□□□ -1.06
NPHP4-202ENST00000378161 COL6A3P12111 3177 aa8.41□□□□□ -1.06
NPHP4-202ENST00000378161 C1orf64Q8NEQ6 169 aa8.4□□□□□ -1.06
NPHP4-202ENST00000378161 BBC3Q96PG8 261 aaPredicted RBP8.4□□□□□ -1.06
NPHP4-202ENST00000378161 CYP4F30PQ9H0H9 118 aa8.4□□□□□ -1.06
NPHP4-202ENST00000378161 DEFB136Q30KP8 78 aa8.4□□□□□ -1.07
NPHP4-202ENST00000378161 SMIM1B2RUZ4 78 aa8.39□□□□□ -1.07
NPHP4-202ENST00000378161 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
NPHP4-202ENST00000378161 SLURP1P55000 103 aa8.39□□□□□ -1.07
NPHP4-202ENST00000378161 C8orf87E5RJ46 101 aa8.39□□□□□ -1.07
NPHP4-202ENST00000378161 SYCNQ0VAF6 134 aa8.39□□□□□ -1.07
NPHP4-202ENST00000378161 hDV103S1A0JD37 113 aa8.39□□□□□ -1.07
NPHP4-202ENST00000378161 K7EQG2 157 aa8.39□□□□□ -1.07
NPHP4-202ENST00000378161 Q6ZQY7 126 aa8.39□□□□□ -1.07
NPHP4-202ENST00000378161 C11orf72Q8NBR9 251 aa8.39□□□□□ -1.07
NPHP4-202ENST00000378161 TRBV6-4A0A1B0GX49 114 aa8.38□□□□□ -1.07
NPHP4-202ENST00000378161 WFDC10AQ9H1F0 79 aa8.38□□□□□ -1.07
NPHP4-202ENST00000378161 REV3LO60673 3130 aa8.38□□□□□ -1.07
NPHP4-202ENST00000378161 LINC00242Q5T6M2 205 aa8.37□□□□□ -1.07
NPHP4-202ENST00000378161 ZNF843Q8N446 348 aa8.37□□□□□ -1.07
NPHP4-202ENST00000378161 KIF25-AS1Q9Y6Z4 181 aa8.37□□□□□ -1.07
NPHP4-202ENST00000378161 C9orf129Q5T035 196 aaKnown RBP8.37□□□□□ -1.07
NPHP4-202ENST00000378161 B9D2Q9BPU9 175 aa8.37□□□□□ -1.07
NPHP4-202ENST00000378161 NOP10Q9NPE3 64 aaKnown RBP8.37□□□□□ -1.07
NPHP4-202ENST00000378161 SPAG11BQ08648 103 aa8.37□□□□□ -1.07
NPHP4-202ENST00000378161 LINC00208Q96KT6 92 aa8.37□□□□□ -1.07
NPHP4-202ENST00000378161 POLQO75417 2590 aa8.37□□□□□ -1.07
NPHP4-202ENST00000378161 KLLNB2CW77 178 aa8.36□□□□□ -1.07
NPHP4-202ENST00000378161 LINC00588Q9Y4M8 146 aa8.36□□□□□ -1.07
NPHP4-202ENST00000378161 K7EQD1 137 aa8.36□□□□□ -1.07
NPHP4-202ENST00000378161 MGAQ8IWI9 3026 aa8.35□□□□□ -1.07
NPHP4-202ENST00000378161 TRBV7-4A0A0J9YYF1 115 aa8.35□□□□□ -1.07
NPHP4-202ENST00000378161 PRM2P04554 102 aa8.35□□□□□ -1.07
NPHP4-202ENST00000378161 LINC00315P59091 139 aa8.35□□□□□ -1.07
NPHP4-202ENST00000378161 ETDCA0A1B0GVM5 59 aa8.34□□□□□ -1.07
NPHP4-202ENST00000378161 COX6A2Q02221 97 aa8.34□□□□□ -1.07
NPHP4-202ENST00000378161 Q6ZQT0 140 aa8.34□□□□□ -1.07
NPHP4-202ENST00000378161 Q8N9L7 120 aa8.34□□□□□ -1.07
NPHP4-202ENST00000378161 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.07
NPHP4-202ENST00000378161 PKD1L2Q7Z442 2459 aa8.34□□□□□ -1.07
NPHP4-202ENST00000378161 MTORP42345 2549 aa8.33□□□□□ -1.08
NPHP4-202ENST00000378161 MUC7Q8TAX7 377 aa8.33□□□□□ -1.08
NPHP4-202ENST00000378161 SPTBN5Q9NRC6 3674 aaKnown RBP8.33□□□□□ -1.08
NPHP4-202ENST00000378161 CCL24O00175 119 aa8.33□□□□□ -1.08
NPHP4-202ENST00000378161 C3orf84H3BNL1 204 aa8.32□□□□□ -1.08
NPHP4-202ENST00000378161 C9orf116Q5BN46 136 aaPredicted RBP8.32□□□□□ -1.08
NPHP4-202ENST00000378161 OBSCN-AS1Q96MR7 158 aa8.32□□□□□ -1.08
NPHP4-202ENST00000378161 RAI1Q7Z5J4 1906 aaPredicted RBP8.32□□□□□ -1.08
NPHP4-202ENST00000378161 C16orf74Q96GX8 76 aa8.31□□□□□ -1.08
NPHP4-202ENST00000378161 COX7BP24311 80 aa8.31□□□□□ -1.08
NPHP4-202ENST00000378161 PROK1P58294 105 aa8.31□□□□□ -1.08
NPHP4-202ENST00000378161 Q6ZRP5 223 aa8.31□□□□□ -1.08
NPHP4-202ENST00000378161 LOC110117498A0A087WWA1 95 aa8.31□□□□□ -1.08
NPHP4-202ENST00000378161 C19orf84I3L1E1 186 aa8.3□□□□□ -1.08
NPHP4-202ENST00000378161 FN1P02751 2386 aaKnown RBP8.3□□□□□ -1.08
NPHP4-202ENST00000378161 FREM2Q5SZK8 3169 aa8.3□□□□□ -1.08
NPHP4-202ENST00000378161 DEFB105AQ8NG35 78 aa8.29□□□□□ -1.08
NPHP4-202ENST00000378161 CHCHD7Q9BUK0 85 aa8.29□□□□□ -1.08
NPHP4-202ENST00000378161 MAP6D1Q9H9H5 199 aa8.29□□□□□ -1.08
NPHP4-202ENST00000378161 ZNF706Q9Y5V0 76 aaPredicted RBP8.29□□□□□ -1.08
NPHP4-202ENST00000378161 PSCAO43653 123 aa8.28□□□□□ -1.08
NPHP4-202ENST00000378161 IGLV1-40P01703 118 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms