RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 IGLV9-49A0A0B4J1Y8 123 aa12.67□□□□□ -0.38
CLSTN1-202ENST00000377298 KIF25-AS1Q9Y6Z4 181 aa12.67□□□□□ -0.38
CLSTN1-202ENST00000377298 M0QXV9 152 aa12.66□□□□□ -0.38
CLSTN1-202ENST00000377298 EPG5Q9HCE0 2579 aa12.66□□□□□ -0.38
CLSTN1-202ENST00000377298 RPL28P46779 137 aaKnown RBP12.66□□□□□ -0.38
CLSTN1-202ENST00000377298 IMUPQ9GZP8 106 aa12.66□□□□□ -0.38
CLSTN1-202ENST00000377298 C9orf116Q5BN46 136 aaPredicted RBP12.65□□□□□ -0.38
CLSTN1-202ENST00000377298 WFDC10BQ8IUB3 73 aa12.65□□□□□ -0.38
CLSTN1-202ENST00000377298 POLQO75417 2590 aa12.65□□□□□ -0.38
CLSTN1-202ENST00000377298 SCXQ7RTU7 201 aa12.65□□□□□ -0.38
CLSTN1-202ENST00000377298 LINC01561Q8N1V8 128 aa12.65□□□□□ -0.38
CLSTN1-202ENST00000377298 C6orf223Q8N319 242 aa12.65□□□□□ -0.38
CLSTN1-202ENST00000377298 C2orf48Q96LS8 159 aa12.64□□□□□ -0.39
CLSTN1-202ENST00000377298 C3orf84H3BNL1 204 aa12.64□□□□□ -0.39
CLSTN1-202ENST00000377298 ENHOQ6UWT2 76 aa12.64□□□□□ -0.39
CLSTN1-202ENST00000377298 FAM19A4Q96LR4 140 aa12.64□□□□□ -0.39
CLSTN1-202ENST00000377298 PTPRBP23467 1997 aa12.63□□□□□ -0.39
CLSTN1-202ENST00000377298 FSHBP01225 129 aa12.63□□□□□ -0.39
CLSTN1-202ENST00000377298 TSPEAR-AS2P59090 65 aa12.63□□□□□ -0.39
CLSTN1-202ENST00000377298 C20orf197Q8N268 126 aa12.63□□□□□ -0.39
CLSTN1-202ENST00000377298 CCDC179H3BU77 68 aa12.62□□□□□ -0.39
CLSTN1-202ENST00000377298 NDUFC2-KCTD14E9PQ53 114 aa12.62□□□□□ -0.39
CLSTN1-202ENST00000377298 TRBV10-3A0A0K0K1G6 114 aa12.61□□□□□ -0.39
CLSTN1-202ENST00000377298 ANKRD17O75179 2603 aaKnown RBP12.59□□□□□ -0.39
CLSTN1-202ENST00000377298 CELA1Q9UNI1 258 aa12.59□□□□□ -0.39
CLSTN1-202ENST00000377298 KRTAP24-1Q3LI83 254 aa12.58□□□□□ -0.39
CLSTN1-202ENST00000377298 Q6Q795 121 aa12.58□□□□□ -0.4
CLSTN1-202ENST00000377298 REG3GQ6UW15 175 aa12.58□□□□□ -0.4
CLSTN1-202ENST00000377298 NDUFC2O95298 119 aa12.57□□□□□ -0.4
CLSTN1-202ENST00000377298 ACANP16112 2415 aa12.57□□□□□ -0.4
CLSTN1-202ENST00000377298 KLK9Q2XQG4 91 aa12.56□□□□□ -0.4
CLSTN1-202ENST00000377298 ADAMTSL4-AS1Q5T5F5 129 aa12.56□□□□□ -0.4
CLSTN1-202ENST00000377298 PCSK5Q92824 1860 aa12.56□□□□□ -0.4
CLSTN1-202ENST00000377298 AGRNO00468 2067 aa12.56□□□□□ -0.4
CLSTN1-202ENST00000377298 C10orf25Q5T742 122 aa12.55□□□□□ -0.4
CLSTN1-202ENST00000377298 Q8N814 137 aa12.55□□□□□ -0.4
CLSTN1-202ENST00000377298 FAM240AA0A1B0GVK7 77 aa12.55□□□□□ -0.4
CLSTN1-202ENST00000377298 LINC00315P59091 139 aa12.54□□□□□ -0.4
CLSTN1-202ENST00000377298 NTM-AS1Q6ZSK4 140 aa12.54□□□□□ -0.4
CLSTN1-202ENST00000377298 SERP2Q8N6R1 65 aa12.54□□□□□ -0.4
CLSTN1-202ENST00000377298 TET2Q6N021 2002 aaPredicted RBP12.54□□□□□ -0.4
CLSTN1-202ENST00000377298 FAM236DA0A1B0GTK5 79 aa12.53□□□□□ -0.4
CLSTN1-202ENST00000377298 FAM236CP0DP71 79 aa12.53□□□□□ -0.4
CLSTN1-202ENST00000377298 PRR3P79522 188 aaKnown RBP12.53□□□□□ -0.4
CLSTN1-202ENST00000377298 COX7CP15954 63 aa12.52□□□□□ -0.4
CLSTN1-202ENST00000377298 LINC01556Q5JQF7 62 aa12.52□□□□□ -0.41
CLSTN1-202ENST00000377298 WFDC13Q8IUB5 93 aa12.51□□□□□ -0.41
CLSTN1-202ENST00000377298 C1orf137Q5JT78 98 aa12.51□□□□□ -0.41
CLSTN1-202ENST00000377298 LINC01546A6NGU7 62 aa12.51□□□□□ -0.41
CLSTN1-202ENST00000377298 CIRBP-AS1Q8TBR5 109 aa12.51□□□□□ -0.41
CLSTN1-202ENST00000377298 H3BNG1 76 aa12.5□□□□□ -0.41
CLSTN1-202ENST00000377298 MRPL55Q7Z7F7 128 aaKnown RBP12.5□□□□□ -0.41
CLSTN1-202ENST00000377298 X6R8D5 127 aa12.5□□□□□ -0.41
CLSTN1-202ENST00000377298 Q6ZRU5 148 aa12.49□□□□□ -0.41
CLSTN1-202ENST00000377298 PRYO14603 147 aa12.49□□□□□ -0.41
CLSTN1-202ENST00000377298 COL27A1Q8IZC6 1860 aaPredicted RBP12.48□□□□□ -0.41
CLSTN1-202ENST00000377298 F8P00451 2351 aa12.48□□□□□ -0.41
CLSTN1-202ENST00000377298 ESRGQ1W209 222 aa12.47□□□□□ -0.41
CLSTN1-202ENST00000377298 IGLV5-39A0A0G2JS06 123 aa12.46□□□□□ -0.41
CLSTN1-202ENST00000377298 MDFIQ99750 246 aa12.46□□□□□ -0.41
CLSTN1-202ENST00000377298 IGHV3OR16-9A0A0B4J2B5 98 aa12.46□□□□□ -0.41
CLSTN1-202ENST00000377298 BRK1Q8WUW1 75 aa12.45□□□□□ -0.42
CLSTN1-202ENST00000377298 Q6JHZ5 121 aa12.45□□□□□ -0.42
CLSTN1-202ENST00000377298 A0A087WYN8 130 aa12.45□□□□□ -0.42
CLSTN1-202ENST00000377298 FAM19A3Q7Z5A8 133 aa12.44□□□□□ -0.42
CLSTN1-202ENST00000377298 SBSPONQ8IVN8 264 aa12.44□□□□□ -0.42
CLSTN1-202ENST00000377298 CDIP1Q9H305 208 aa12.41□□□□□ -0.42
CLSTN1-202ENST00000377298 UTRNP46939 3433 aa12.4□□□□□ -0.42
CLSTN1-202ENST00000377298 Q9BRP9 147 aa12.38□□□□□ -0.43
CLSTN1-202ENST00000377298 K7ERS5 55 aa12.38□□□□□ -0.43
CLSTN1-202ENST00000377298 Q8NAQ8 132 aa12.38□□□□□ -0.43
CLSTN1-202ENST00000377298 MPLKIPQ8TAP9 179 aa12.38□□□□□ -0.43
CLSTN1-202ENST00000377298 A0A096LNT2 108 aa12.38□□□□□ -0.43
CLSTN1-202ENST00000377298 LINC00575Q6W349 94 aa12.38□□□□□ -0.43
CLSTN1-202ENST00000377298 Q8N9L7 120 aa12.38□□□□□ -0.43
CLSTN1-202ENST00000377298 NDUFC1O43677 76 aa12.37□□□□□ -0.43
CLSTN1-202ENST00000377298 C22orf24Q9Y442 160 aa12.37□□□□□ -0.43
CLSTN1-202ENST00000377298 FLNBO75369 2602 aaKnown RBP12.37□□□□□ -0.43
CLSTN1-202ENST00000377298 LINC00337Q8N6G1 96 aa12.36□□□□□ -0.43
CLSTN1-202ENST00000377298 SNURFQ9Y675 71 aa12.36□□□□□ -0.43
CLSTN1-202ENST00000377298 IGLV5-45A0A087WSX0 123 aa12.36□□□□□ -0.43
CLSTN1-202ENST00000377298 DNAH12Q6ZR08 3092 aa12.35□□□□□ -0.43
CLSTN1-202ENST00000377298 ATP5EP56381 51 aaPredicted RBP12.32□□□□□ -0.44
CLSTN1-202ENST00000377298 SMCPP49901 116 aaPredicted RBP12.32□□□□□ -0.44
CLSTN1-202ENST00000377298 Q9UF83 564 aa12.32□□□□□ -0.44
CLSTN1-202ENST00000377298 A0A087WVE0 104 aa12.32□□□□□ -0.44
CLSTN1-202ENST00000377298 PRO0461Q9UI25 63 aa12.31□□□□□ -0.44
CLSTN1-202ENST00000377298 Q6ZVQ6 151 aa12.3□□□□□ -0.44
CLSTN1-202ENST00000377298 IGHV6-1A0A0B4J1U7 121 aa12.3□□□□□ -0.44
CLSTN1-202ENST00000377298 PRLHP81277 87 aa12.3□□□□□ -0.44
CLSTN1-202ENST00000377298 C6orf48Q9UBA6 75 aa12.29□□□□□ -0.44
CLSTN1-202ENST00000377298 SERP1Q9Y6X1 66 aa12.29□□□□□ -0.44
CLSTN1-202ENST00000377298 A8MTW9 85 aa12.29□□□□□ -0.44
CLSTN1-202ENST00000377298 PRR15LQ9BU68 103 aa12.29□□□□□ -0.44
CLSTN1-202ENST00000377298 MUC4Q99102 2169 aa12.29□□□□□ -0.44
CLSTN1-202ENST00000377298 A0A087WSZ3 146 aa12.28□□□□□ -0.44
CLSTN1-202ENST00000377298 SMCR5Q8TEV8 140 aa12.28□□□□□ -0.44
CLSTN1-202ENST00000377298 WWC2-AS2Q96NR7 200 aa12.27□□□□□ -0.45
CLSTN1-202ENST00000377298 LIMD2Q9BT23 127 aa12.26□□□□□ -0.45
CLSTN1-202ENST00000377298 FAM30AQ9NZY2 134 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms