RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 H3BRM9 83 aa13.84□□□□□ -0.19
SRM-201ENST00000376957 NDUFA6P56556 154 aa13.84□□□□□ -0.19
SRM-201ENST00000376957 PRR3P79522 188 aaKnown RBP13.84□□□□□ -0.19
SRM-201ENST00000376957 GAGE2EQ4V326 116 aa13.84□□□□□ -0.19
SRM-201ENST00000376957 GAGE2DQ9UEU5 116 aa13.84□□□□□ -0.19
SRM-201ENST00000376957 ATP5LO75964 103 aa13.83□□□□□ -0.2
SRM-201ENST00000376957 PDZD11Q5EBL8 140 aa13.83□□□□□ -0.2
SRM-201ENST00000376957 A0A1W2PNN7 141 aa13.81□□□□□ -0.2
SRM-201ENST00000376957 F8VRH5 84 aa13.81□□□□□ -0.2
SRM-201ENST00000376957 IGLV5-45A0A087WSX0 123 aa13.8□□□□□ -0.2
SRM-201ENST00000376957 HNRNPA3P51991 378 aaKnown RBP13.8□□□□□ -0.2
SRM-201ENST00000376957 CHCHD1Q96BP2 118 aaKnown RBP13.79□□□□□ -0.2
SRM-201ENST00000376957 YPEL4Q96NS1 127 aa13.79□□□□□ -0.2
SRM-201ENST00000376957 SMIM1B2RUZ4 78 aa13.78□□□□□ -0.2
SRM-201ENST00000376957 COX7B2Q8TF08 81 aa13.78□□□□□ -0.2
SRM-201ENST00000376957 CBLN2Q8IUK8 224 aa13.77□□□□□ -0.21
SRM-201ENST00000376957 URB1-AS1Q96HZ7 61 aa13.77□□□□□ -0.21
SRM-201ENST00000376957 PMCHL1Q16048 86 aa13.76□□□□□ -0.21
SRM-201ENST00000376957 SLC7A5P1Q8MH63 180 aa13.76□□□□□ -0.21
SRM-201ENST00000376957 MYCBP2O75592 4640 aa13.76□□□□□ -0.21
SRM-201ENST00000376957 A0A096LNJ9 63 aa13.75□□□□□ -0.21
SRM-201ENST00000376957 SPINK6Q6UWN8 80 aa13.75□□□□□ -0.21
SRM-201ENST00000376957 FAM19A5Q7Z5A7 132 aaPredicted RBP13.75□□□□□ -0.21
SRM-201ENST00000376957 IGLC3P0DOY3 106 aa13.74□□□□□ -0.21
SRM-201ENST00000376957 PHF5AQ7RTV0 110 aaKnown RBP13.74□□□□□ -0.21
SRM-201ENST00000376957 SPINK8P0C7L1 97 aa13.73□□□□□ -0.21
SRM-201ENST00000376957 BAGE3Q86Y29 109 aa13.73□□□□□ -0.21
SRM-201ENST00000376957 HSBP1O75506 76 aa13.72□□□□□ -0.21
SRM-201ENST00000376957 REG3GQ6UW15 175 aa13.72□□□□□ -0.21
SRM-201ENST00000376957 FAM168BA1KXE4 195 aa13.71□□□□□ -0.21
SRM-201ENST00000376957 UBE2BP63146 152 aa13.71□□□□□ -0.21
SRM-201ENST00000376957 M0QXV9 152 aa13.7□□□□□ -0.22
SRM-201ENST00000376957 PSORS1C2Q9UIG4 136 aa13.7□□□□□ -0.22
SRM-201ENST00000376957 TRGC2P03986 189 aa13.69□□□□□ -0.22
SRM-201ENST00000376957 C1orf137Q5JT78 98 aa13.69□□□□□ -0.22
SRM-201ENST00000376957 C9orf129Q5T035 196 aaKnown RBP13.68□□□□□ -0.22
SRM-201ENST00000376957 TMEM170BQ5T4T1 132 aa13.68□□□□□ -0.22
SRM-201ENST00000376957 SERTAD4-AS1Q5TG53 156 aa13.68□□□□□ -0.22
SRM-201ENST00000376957 SFTA2Q6UW10 78 aa13.68□□□□□ -0.22
SRM-201ENST00000376957 IFI27L1Q96BM0 104 aa13.68□□□□□ -0.22
SRM-201ENST00000376957 CHTOPQ9Y3Y2 248 aaKnown RBP13.68□□□□□ -0.22
SRM-201ENST00000376957 LBHQ53QV2 105 aaPredicted RBP13.67□□□□□ -0.22
SRM-201ENST00000376957 ZNF22P17026 224 aaPredicted RBP13.66□□□□□ -0.22
SRM-201ENST00000376957 XAGE1AQ9HD64 81 aa13.65□□□□□ -0.22
SRM-201ENST00000376957 TRAV12-1A0A0B4J245 112 aa13.64□□□□□ -0.23
SRM-201ENST00000376957 SRSF9Q13242 221 aaKnown RBP eCLIP13.64□□□□□ -0.23
SRM-201ENST00000376957 IGLV5-39A0A0G2JS06 123 aa13.63□□□□□ -0.23
SRM-201ENST00000376957 C11orf86A6NJI1 115 aa13.62□□□□□ -0.23
SRM-201ENST00000376957 ODF1Q14990 250 aa13.62□□□□□ -0.23
SRM-201ENST00000376957 LINC01600Q96MT4 127 aa13.61□□□□□ -0.23
SRM-201ENST00000376957 HERC1Q15751 4861 aa13.6□□□□□ -0.23
SRM-201ENST00000376957 IGLV7-43P04211 117 aa13.6□□□□□ -0.23
SRM-201ENST00000376957 TP73-AS1Q9UF72 201 aa13.6□□□□□ -0.23
SRM-201ENST00000376957 C22orf24Q9Y442 160 aa13.6□□□□□ -0.23
SRM-201ENST00000376957 LEPROTL1O95214 131 aa13.59□□□□□ -0.23
SRM-201ENST00000376957 COX17Q14061 63 aa13.59□□□□□ -0.23
SRM-201ENST00000376957 FAM19A2Q8N3H0 131 aa13.59□□□□□ -0.23
SRM-201ENST00000376957 DIRC1Q969H9 104 aa13.59□□□□□ -0.23
SRM-201ENST00000376957 COLCA2A8K830 154 aa13.58□□□□□ -0.24
SRM-201ENST00000376957 PFN2P35080 140 aa13.58□□□□□ -0.24
SRM-201ENST00000376957 KRTAP7-1Q8IUC3 87 aa13.58□□□□□ -0.24
SRM-201ENST00000376957 HSPB8Q9UJY1 196 aa13.58□□□□□ -0.24
SRM-201ENST00000376957 MRPL55Q7Z7F7 128 aaKnown RBP13.57□□□□□ -0.24
SRM-201ENST00000376957 SERF1AO75920 110 aa13.56□□□□□ -0.24
SRM-201ENST00000376957 NKAPP1Q8N9T2 125 aa13.56□□□□□ -0.24
SRM-201ENST00000376957 PLA2G2DQ9UNK4 145 aa13.56□□□□□ -0.24
SRM-201ENST00000376957 NUPR1O60356 82 aa13.55□□□□□ -0.24
SRM-201ENST00000376957 ERG28Q9UKR5 140 aa13.55□□□□□ -0.24
SRM-201ENST00000376957 H0Y8G0 127 aa13.54□□□□□ -0.24
SRM-201ENST00000376957 MT1HL1P0DM35 61 aa13.53□□□□□ -0.24
SRM-201ENST00000376957 TMEM223A0PJW6 202 aa13.52□□□□□ -0.25
SRM-201ENST00000376957 LRP1Q07954 4544 aaKnown RBP13.51□□□□□ -0.25
SRM-201ENST00000376957 ATP6V1G1O75348 118 aa13.51□□□□□ -0.25
SRM-201ENST00000376957 RPL24P83731 157 aaKnown RBP13.51□□□□□ -0.25
SRM-201ENST00000376957 KRTAP11-1Q8IUC1 163 aa13.51□□□□□ -0.25
SRM-201ENST00000376957 ZNF625Q96I27 306 aaPredicted RBP13.51□□□□□ -0.25
SRM-201ENST00000376957 PKHD1L1Q86WI1 4243 aa13.5□□□□□ -0.25
SRM-201ENST00000376957 LINC00587B1AMM8 73 aa13.5□□□□□ -0.25
SRM-201ENST00000376957 PLNP26678 52 aa13.5□□□□□ -0.25
SRM-201ENST00000376957 H0Y9J4 135 aa13.49□□□□□ -0.25
SRM-201ENST00000376957 FABP4P15090 132 aa13.48□□□□□ -0.25
SRM-201ENST00000376957 LINC00158P58513 81 aa13.48□□□□□ -0.25
SRM-201ENST00000376957 IGLV5-37A0A075B6J1 123 aa13.47□□□□□ -0.25
SRM-201ENST00000376957 HERV-K104P63124 156 aa13.47□□□□□ -0.25
SRM-201ENST00000376957 LINC00167Q96N53 147 aa13.47□□□□□ -0.25
SRM-201ENST00000376957 MAP1LC3CQ9BXW4 147 aa13.47□□□□□ -0.25
SRM-201ENST00000376957 SND1-IT1Q9HBX3 110 aa13.47□□□□□ -0.25
SRM-201ENST00000376957 HERVK_113P61574 105 aa13.46□□□□□ -0.25
SRM-201ENST00000376957 ZNF861PO60384 105 aa13.45□□□□□ -0.26
SRM-201ENST00000376957 RPL28P46779 137 aaKnown RBP13.45□□□□□ -0.26
SRM-201ENST00000376957 FAT3Q8TDW7 4589 aa13.45□□□□□ -0.26
SRM-201ENST00000376957 MYMXA0A1B0GTQ4 84 aa13.44□□□□□ -0.26
SRM-201ENST00000376957 GAGE10A6NGK3 116 aa13.44□□□□□ -0.26
SRM-201ENST00000376957 RPL37AP8A6NKH3 93 aa13.44□□□□□ -0.26
SRM-201ENST00000376957 LINC00310P59036 64 aa13.44□□□□□ -0.26
SRM-201ENST00000376957 MEIG1Q5JSS6 88 aa13.44□□□□□ -0.26
SRM-201ENST00000376957 BCE1O60756 84 aa13.43□□□□□ -0.26
SRM-201ENST00000376957 DPM2O94777 84 aa13.43□□□□□ -0.26
SRM-201ENST00000376957 SCO1O75880 301 aa13.42□□□□□ -0.26
SRM-201ENST00000376957 KRTAP10-8P60410 259 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms