RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 HIST1H2BOP23527 126 aa11.1□□□□□ -0.63
C6orf48-207ENST00000375642 HIST1H2BBP33778 126 aa11.1□□□□□ -0.63
C6orf48-207ENST00000375642 HIST1H2BDP58876 126 aa11.1□□□□□ -0.63
C6orf48-207ENST00000375642 CKS1BP61024 79 aa11.1□□□□□ -0.63
C6orf48-207ENST00000375642 HIST1H2BCP62807 126 aa11.1□□□□□ -0.63
C6orf48-207ENST00000375642 HIST2H2BEQ16778 126 aa11.1□□□□□ -0.63
C6orf48-207ENST00000375642 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.1□□□□□ -0.63
C6orf48-207ENST00000375642 Q5VSD8 79 aa11.1□□□□□ -0.63
C6orf48-207ENST00000375642 C2orf82Q6UX34 121 aa11.1□□□□□ -0.63
C6orf48-207ENST00000375642 HIST1H2BHQ93079 126 aa11.1□□□□□ -0.63
C6orf48-207ENST00000375642 HIST1H2BNQ99877 126 aa11.1□□□□□ -0.63
C6orf48-207ENST00000375642 HIST1H2BMQ99879 126 aa11.1□□□□□ -0.63
C6orf48-207ENST00000375642 A0A087WYN8 130 aa11.09□□□□□ -0.63
C6orf48-207ENST00000375642 SMIM1B2RUZ4 78 aa11.09□□□□□ -0.63
C6orf48-207ENST00000375642 NUPR1O60356 82 aa11.09□□□□□ -0.63
C6orf48-207ENST00000375642 LEPROTL1O95214 131 aa11.09□□□□□ -0.63
C6orf48-207ENST00000375642 GAGE2BQ13066 116 aa11.09□□□□□ -0.63
C6orf48-207ENST00000375642 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
C6orf48-207ENST00000375642 CHTOPQ9Y3Y2 248 aaKnown RBP11.09□□□□□ -0.63
C6orf48-207ENST00000375642 TRAV12-1A0A0B4J245 112 aa11.08□□□□□ -0.64
C6orf48-207ENST00000375642 SPINK8P0C7L1 97 aa11.08□□□□□ -0.64
C6orf48-207ENST00000375642 C6orf48Q9UBA6 75 aa11.08□□□□□ -0.64
C6orf48-207ENST00000375642 TRBV30A0A0K0K1B3 111 aa11.07□□□□□ -0.64
C6orf48-207ENST00000375642 PTTG1IPP53801 180 aa11.07□□□□□ -0.64
C6orf48-207ENST00000375642 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
C6orf48-207ENST00000375642 RPL18AQ02543 176 aaKnown RBP11.06□□□□□ -0.64
C6orf48-207ENST00000375642 STPG4Q8N801 248 aa11.06□□□□□ -0.64
C6orf48-207ENST00000375642 COX7B2Q8TF08 81 aa11.06□□□□□ -0.64
C6orf48-207ENST00000375642 PLAC8Q9NZF1 115 aa11.06□□□□□ -0.64
C6orf48-207ENST00000375642 HSPB8Q9UJY1 196 aa11.06□□□□□ -0.64
C6orf48-207ENST00000375642 C11orf86A6NJI1 115 aa11.05□□□□□ -0.64
C6orf48-207ENST00000375642 FABP4P15090 132 aa11.05□□□□□ -0.64
C6orf48-207ENST00000375642 F8VRH5 84 aa11.04□□□□□ -0.64
C6orf48-207ENST00000375642 PLA2G1BP04054 148 aaKnown RBP11.04□□□□□ -0.64
C6orf48-207ENST00000375642 TLX1NBP0CAT3 122 aa11.04□□□□□ -0.64
C6orf48-207ENST00000375642 CXCL5P42830 114 aa11.04□□□□□ -0.64
C6orf48-207ENST00000375642 TMEM170BQ5T4T1 132 aa11.04□□□□□ -0.64
C6orf48-207ENST00000375642 H0Y8G0 127 aa11.03□□□□□ -0.64
C6orf48-207ENST00000375642 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
C6orf48-207ENST00000375642 IGLV5-39A0A0G2JS06 123 aa11.02□□□□□ -0.65
C6orf48-207ENST00000375642 C9orf116Q5BN46 136 aaPredicted RBP11.02□□□□□ -0.65
C6orf48-207ENST00000375642 Q6ZRP5 223 aa11.02□□□□□ -0.65
C6orf48-207ENST00000375642 SRRM2Q9UQ35 2752 aaKnown RBP11.01□□□□□ -0.65
C6orf48-207ENST00000375642 NDUFC2-KCTD14E9PQ53 114 aa11.01□□□□□ -0.65
C6orf48-207ENST00000375642 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
C6orf48-207ENST00000375642 ODF1Q14990 250 aa11□□□□□ -0.65
C6orf48-207ENST00000375642 GAGE2EQ4V326 116 aa11□□□□□ -0.65
C6orf48-207ENST00000375642 GAGE2DQ9UEU5 116 aa11□□□□□ -0.65
C6orf48-207ENST00000375642 J3QL48 77 aa10.99□□□□□ -0.65
C6orf48-207ENST00000375642 COA6Q5JTJ3 125 aaKnown RBP10.98□□□□□ -0.65
C6orf48-207ENST00000375642 C7orf33Q8WU49 177 aa10.98□□□□□ -0.65
C6orf48-207ENST00000375642 MAP1LC3CQ9BXW4 147 aa10.98□□□□□ -0.65
C6orf48-207ENST00000375642 A0A1W2PNN7 141 aa10.97□□□□□ -0.65
C6orf48-207ENST00000375642 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
C6orf48-207ENST00000375642 TMEM223A0PJW6 202 aa10.96□□□□□ -0.65
C6orf48-207ENST00000375642 MYCBP2O75592 4640 aa10.96□□□□□ -0.66
C6orf48-207ENST00000375642 PLNP26678 52 aa10.95□□□□□ -0.66
C6orf48-207ENST00000375642 DPM2O94777 84 aa10.94□□□□□ -0.66
C6orf48-207ENST00000375642 FLG2Q5D862 2391 aaPredicted RBP10.94□□□□□ -0.66
C6orf48-207ENST00000375642 KRTAP10-4P60372 401 aaPredicted RBP10.93□□□□□ -0.66
C6orf48-207ENST00000375642 SFTA2Q6UW10 78 aa10.93□□□□□ -0.66
C6orf48-207ENST00000375642 PMCHL2Q9BQD1 86 aa10.93□□□□□ -0.66
C6orf48-207ENST00000375642 FAM168BA1KXE4 195 aa10.92□□□□□ -0.66
C6orf48-207ENST00000375642 C9orf129Q5T035 196 aaKnown RBP10.92□□□□□ -0.66
C6orf48-207ENST00000375642 SYS1-DBNDD2H3BUS1 97 aa10.91□□□□□ -0.66
C6orf48-207ENST00000375642 IGKCP01834 107 aa10.91□□□□□ -0.66
C6orf48-207ENST00000375642 FAM19A5Q7Z5A7 132 aaPredicted RBP10.91□□□□□ -0.66
C6orf48-207ENST00000375642 XAGE1AQ9HD64 81 aa10.91□□□□□ -0.66
C6orf48-207ENST00000375642 PFN2P35080 140 aa10.89□□□□□ -0.67
C6orf48-207ENST00000375642 ZNF625Q96I27 306 aaPredicted RBP10.89□□□□□ -0.67
C6orf48-207ENST00000375642 HERVK_113P61574 105 aa10.88□□□□□ -0.67
C6orf48-207ENST00000375642 PET117Q6UWS5 81 aa10.88□□□□□ -0.67
C6orf48-207ENST00000375642 PHF5AQ7RTV0 110 aaKnown RBP10.88□□□□□ -0.67
C6orf48-207ENST00000375642 ERG28Q9UKR5 140 aa10.88□□□□□ -0.67
C6orf48-207ENST00000375642 COX17Q14061 63 aa10.87□□□□□ -0.67
C6orf48-207ENST00000375642 KRTAP7-1Q8IUC3 87 aa10.86□□□□□ -0.67
C6orf48-207ENST00000375642 PLEKHB2Q96CS7 222 aa10.86□□□□□ -0.67
C6orf48-207ENST00000375642 M0QXV9 152 aa10.85□□□□□ -0.67
C6orf48-207ENST00000375642 LEPROTO15243 131 aa10.85□□□□□ -0.67
C6orf48-207ENST00000375642 C3orf79P0CE67 100 aa10.85□□□□□ -0.67
C6orf48-207ENST00000375642 KRTDAPP60985 99 aa10.85□□□□□ -0.67
C6orf48-207ENST00000375642 PRR3P79522 188 aaKnown RBP10.85□□□□□ -0.67
C6orf48-207ENST00000375642 LINC01545Q5VT33 79 aa10.85□□□□□ -0.67
C6orf48-207ENST00000375642 UBR4Q5T4S7 5183 aa10.85□□□□□ -0.67
C6orf48-207ENST00000375642 SERTAD4-AS1Q5TG53 156 aa10.84□□□□□ -0.67
C6orf48-207ENST00000375642 NDUFA12Q9UI09 145 aa10.84□□□□□ -0.67
C6orf48-207ENST00000375642 MYMXA0A1B0GTQ4 84 aa10.83□□□□□ -0.68
C6orf48-207ENST00000375642 HERV-K104P63124 156 aa10.83□□□□□ -0.68
C6orf48-207ENST00000375642 J3QQQ9 107 aa10.82□□□□□ -0.68
C6orf48-207ENST00000375642 S100A6P06703 90 aa10.82□□□□□ -0.68
C6orf48-207ENST00000375642 HNRNPA3P51991 378 aaKnown RBP10.82□□□□□ -0.68
C6orf48-207ENST00000375642 LINC00158P58513 81 aa10.82□□□□□ -0.68
C6orf48-207ENST00000375642 SND1-IT1Q9HBX3 110 aa10.82□□□□□ -0.68
C6orf48-207ENST00000375642 C22orf24Q9Y442 160 aa10.82□□□□□ -0.68
C6orf48-207ENST00000375642 S100A2P29034 98 aa10.81□□□□□ -0.68
C6orf48-207ENST00000375642 TSPEAR-AS2P59090 65 aa10.81□□□□□ -0.68
C6orf48-207ENST00000375642 UBE2BP63146 152 aa10.81□□□□□ -0.68
C6orf48-207ENST00000375642 PSORS1C2Q9UIG4 136 aa10.81□□□□□ -0.68
C6orf48-207ENST00000375642 PLA2G2DQ9UNK4 145 aa10.81□□□□□ -0.68
C6orf48-207ENST00000375642 C20orf202A1L168 122 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms