RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 USP24Q9UPU5 2620 aa4.36□□□□□ -1.71
SCN2A-202ENST00000375427 RSPO4Q2I0M5 234 aaPredicted RBP4.36□□□□□ -1.71
SCN2A-202ENST00000375427 C9orf106Q8NAJ2 232 aa4.36□□□□□ -1.71
SCN2A-202ENST00000375427 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
SCN2A-202ENST00000375427 NRXN3Q9Y4C0 1643 aa4.36□□□□□ -1.71
SCN2A-202ENST00000375427 RPL37AP61513 92 aaKnown RBP4.36□□□□□ -1.71
SCN2A-202ENST00000375427 TRBV6-4A0A1B0GX49 114 aa4.36□□□□□ -1.71
SCN2A-202ENST00000375427 ADORA2A-AS1P86434 159 aa4.36□□□□□ -1.71
SCN2A-202ENST00000375427 LINC00205P59089 165 aa4.36□□□□□ -1.71
SCN2A-202ENST00000375427 CEMP1Q6PRD7 247 aaPredicted RBP4.36□□□□□ -1.71
SCN2A-202ENST00000375427 Q6ZR03 302 aa4.36□□□□□ -1.71
SCN2A-202ENST00000375427 PAPPAQ13219 1627 aa4.36□□□□□ -1.71
SCN2A-202ENST00000375427 RSPO1Q2MKA7 263 aaPredicted RBP4.36□□□□□ -1.71
SCN2A-202ENST00000375427 LINC00336Q6ZUF6 198 aa4.36□□□□□ -1.71
SCN2A-202ENST00000375427 FAM19A4Q96LR4 140 aa4.35□□□□□ -1.71
SCN2A-202ENST00000375427 IGLV4-60A0A075B6I1 120 aa4.35□□□□□ -1.71
SCN2A-202ENST00000375427 Q8IZM0 81 aa4.35□□□□□ -1.71
SCN2A-202ENST00000375427 RUSC1-AS1Q66K80 236 aa4.35□□□□□ -1.71
SCN2A-202ENST00000375427 GLI3P10071 1580 aa4.35□□□□□ -1.71
SCN2A-202ENST00000375427 CSRP2Q16527 193 aa4.34□□□□□ -1.71
SCN2A-202ENST00000375427 KPRPQ5T749 579 aaPredicted RBP4.34□□□□□ -1.71
SCN2A-202ENST00000375427 IGKV1-8A0A0C4DH67 115 aa4.34□□□□□ -1.71
SCN2A-202ENST00000375427 GRNP28799 593 aaKnown RBP4.34□□□□□ -1.71
SCN2A-202ENST00000375427 C11orf71Q6IPW1 123 aa4.34□□□□□ -1.71
SCN2A-202ENST00000375427 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
SCN2A-202ENST00000375427 TMEM92Q6UXU6 159 aa4.34□□□□□ -1.71
SCN2A-202ENST00000375427 HECTD1Q9ULT8 2610 aa4.34□□□□□ -1.71
SCN2A-202ENST00000375427 LINC00114Q6XXX2 140 aa4.34□□□□□ -1.72
SCN2A-202ENST00000375427 LINC00846Q9NV44 126 aa4.34□□□□□ -1.72
SCN2A-202ENST00000375427 LINC00313P59037 77 aa4.33□□□□□ -1.72
SCN2A-202ENST00000375427 MBD6Q96DN6 1003 aa4.33□□□□□ -1.72
SCN2A-202ENST00000375427 ADAMTSL1Q8N6G6 1762 aa4.33□□□□□ -1.72
SCN2A-202ENST00000375427 MAPKAPK5-AS1Q8N8E1 139 aa4.33□□□□□ -1.72
SCN2A-202ENST00000375427 ZNF831Q5JPB2 1677 aa4.33□□□□□ -1.72
SCN2A-202ENST00000375427 LINC00588Q9Y4M8 146 aa4.33□□□□□ -1.72
SCN2A-202ENST00000375427 SIGLEC1Q9BZZ2 1709 aa4.33□□□□□ -1.72
SCN2A-202ENST00000375427 CSRP1P21291 193 aaKnown RBP4.33□□□□□ -1.72
SCN2A-202ENST00000375427 SLURP1P55000 103 aa4.32□□□□□ -1.72
SCN2A-202ENST00000375427 DEFB131BA0A096LNP1 70 aa4.32□□□□□ -1.72
SCN2A-202ENST00000375427 LRP5O75197 1615 aa4.32□□□□□ -1.72
SCN2A-202ENST00000375427 STAB1Q9NY15 2570 aa4.32□□□□□ -1.72
SCN2A-202ENST00000375427 RNF223E7ERA6 249 aa4.32□□□□□ -1.72
SCN2A-202ENST00000375427 MOBPQ13875 183 aa4.32□□□□□ -1.72
SCN2A-202ENST00000375427 LY6G6DO95868 133 aa4.32□□□□□ -1.72
SCN2A-202ENST00000375427 MAP6D1Q9H9H5 199 aa4.31□□□□□ -1.72
SCN2A-202ENST00000375427 IGLV3-21P80748 117 aaPredicted RBP4.31□□□□□ -1.72
SCN2A-202ENST00000375427 LYPD2Q6UXB3 125 aa4.31□□□□□ -1.72
SCN2A-202ENST00000375427 NHSQ6T4R5 1651 aa4.31□□□□□ -1.72
SCN2A-202ENST00000375427 DEFB4AO15263 64 aa4.31□□□□□ -1.72
SCN2A-202ENST00000375427 FRMD6-AS1P0C7T7 363 aa4.3□□□□□ -1.72
SCN2A-202ENST00000375427 PRR9Q5T870 116 aa4.3□□□□□ -1.72
SCN2A-202ENST00000375427 Q8N2B8 174 aa4.3□□□□□ -1.72
SCN2A-202ENST00000375427 LINC00959A0A1B0GUT2 108 aa4.3□□□□□ -1.72
SCN2A-202ENST00000375427 HELZ2Q9BYK8 2649 aaKnown RBP4.3□□□□□ -1.72
SCN2A-202ENST00000375427 TLX1NBP0CAT3 122 aa4.3□□□□□ -1.72
SCN2A-202ENST00000375427 EGFEM1PQ0D2K5 195 aa4.3□□□□□ -1.72
SCN2A-202ENST00000375427 COL24A1Q17RW2 1714 aa4.29□□□□□ -1.72
SCN2A-202ENST00000375427 DAZAP2Q15038 168 aaPredicted RBP4.29□□□□□ -1.72
SCN2A-202ENST00000375427 FSTL3O95633 263 aa4.29□□□□□ -1.72
SCN2A-202ENST00000375427 C1orf147Q96MC9 270 aaPredicted RBP4.29□□□□□ -1.72
SCN2A-202ENST00000375427 E7EUB6 86 aa4.29□□□□□ -1.72
SCN2A-202ENST00000375427 ITGBL1O95965 494 aaPredicted RBP4.29□□□□□ -1.72
SCN2A-202ENST00000375427 LELP1Q5T871 98 aa4.29□□□□□ -1.72
SCN2A-202ENST00000375427 M0QY20 66 aa4.28□□□□□ -1.72
SCN2A-202ENST00000375427 SPINK7P58062 85 aa4.28□□□□□ -1.72
SCN2A-202ENST00000375427 C17orf58Q2M2W7 97 aa4.28□□□□□ -1.72
SCN2A-202ENST00000375427 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
SCN2A-202ENST00000375427 IGLV2-14P01704 120 aa4.27□□□□□ -1.73
SCN2A-202ENST00000375427 LINC01556Q5JQF7 62 aa4.27□□□□□ -1.73
SCN2A-202ENST00000375427 LINC01465Q8N7H1 131 aa4.27□□□□□ -1.73
SCN2A-202ENST00000375427 WDR87Q6ZQQ6 2873 aa4.27□□□□□ -1.73
SCN2A-202ENST00000375427 Q6ZRU5 148 aa4.27□□□□□ -1.73
SCN2A-202ENST00000375427 C11orf72Q8NBR9 251 aa4.27□□□□□ -1.73
SCN2A-202ENST00000375427 FAM215AQ9Y5M1 114 aa4.27□□□□□ -1.73
SCN2A-202ENST00000375427 I3L2K1 104 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 K7EIM0 57 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 Q6ZS46 218 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 A0A0D9SG42 100 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 Q6ZTI0 123 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 NHSL1Q5SYE7 1610 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 SHANK3Q9BYB0 1731 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 Q6YL49 198 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 PRSS33Q8NF86 280 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.26□□□□□ -1.73
SCN2A-202ENST00000375427 PATE3B3GLJ2 98 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 SPACA4Q8TDM5 124 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 LINC00476Q8WZB0 136 aa4.26□□□□□ -1.73
SCN2A-202ENST00000375427 COX6A2Q02221 97 aa4.25□□□□□ -1.73
SCN2A-202ENST00000375427 ANKRD17O75179 2603 aaKnown RBP4.25□□□□□ -1.73
SCN2A-202ENST00000375427 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
SCN2A-202ENST00000375427 COX6B2Q6YFQ2 88 aa4.25□□□□□ -1.73
SCN2A-202ENST00000375427 RITA1Q96K30 269 aa4.25□□□□□ -1.73
SCN2A-202ENST00000375427 PRR3P79522 188 aaKnown RBP4.24□□□□□ -1.73
SCN2A-202ENST00000375427 KLKP1Q107X0 134 aa4.24□□□□□ -1.73
SCN2A-202ENST00000375427 KRTAP27-1Q3LI81 207 aa4.24□□□□□ -1.73
SCN2A-202ENST00000375427 ZNF581Q9P0T4 197 aa4.24□□□□□ -1.73
SCN2A-202ENST00000375427 CHCHD7Q9BUK0 85 aa4.24□□□□□ -1.73
SCN2A-202ENST00000375427 PRAC2D3DTV9 90 aa4.23□□□□□ -1.73
SCN2A-202ENST00000375427 ZFP36P26651 326 aaKnown RBP4.23□□□□□ -1.73
SCN2A-202ENST00000375427 MRGPRG-AS1Q2M3A8 158 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms