RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 COX7B2Q8TF08 81 aa7.3□□□□□ -1.24
HSPG2-202ENST00000374676 TRBV30A0A0K0K1B3 111 aa7.29□□□□□ -1.24
HSPG2-202ENST00000374676 DPM2O94777 84 aa7.29□□□□□ -1.24
HSPG2-202ENST00000374676 PLNP26678 52 aa7.29□□□□□ -1.24
HSPG2-202ENST00000374676 CXCL5P42830 114 aa7.29□□□□□ -1.24
HSPG2-202ENST00000374676 CKS1BP61024 79 aa7.29□□□□□ -1.24
HSPG2-202ENST00000374676 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
HSPG2-202ENST00000374676 FAM30AQ9NZY2 134 aa7.29□□□□□ -1.24
HSPG2-202ENST00000374676 TMEM223A0PJW6 202 aa7.28□□□□□ -1.24
HSPG2-202ENST00000374676 IGKCP01834 107 aa7.28□□□□□ -1.24
HSPG2-202ENST00000374676 C3orf79P0CE67 100 aa7.28□□□□□ -1.24
HSPG2-202ENST00000374676 XGP55808 180 aa7.28□□□□□ -1.24
HSPG2-202ENST00000374676 LINC01545Q5VT33 79 aa7.28□□□□□ -1.24
HSPG2-202ENST00000374676 C2orf82Q6UX34 121 aa7.28□□□□□ -1.24
HSPG2-202ENST00000374676 C6orf48Q9UBA6 75 aa7.28□□□□□ -1.24
HSPG2-202ENST00000374676 LOC107984640A0A0U1RRK4 108 aa7.27□□□□□ -1.25
HSPG2-202ENST00000374676 C5orf52A6NGY3 159 aa7.27□□□□□ -1.25
HSPG2-202ENST00000374676 TLX1NBP0CAT3 122 aa7.27□□□□□ -1.25
HSPG2-202ENST00000374676 S100A2P29034 98 aa7.27□□□□□ -1.25
HSPG2-202ENST00000374676 SNRPEP62304 92 aaKnown RBP7.27□□□□□ -1.25
HSPG2-202ENST00000374676 CIRBPQ14011 172 aaKnown RBP7.27□□□□□ -1.25
HSPG2-202ENST00000374676 HIST1H2BLQ99880 126 aa7.26□□□□□ -1.25
HSPG2-202ENST00000374676 PMCHL2Q9BQD1 86 aa7.26□□□□□ -1.25
HSPG2-202ENST00000374676 HSPG2P98160 4391 aa7.26□□□□□ -1.25
HSPG2-202ENST00000374676 KRTDAPP60985 99 aa7.25□□□□□ -1.25
HSPG2-202ENST00000374676 LINC00474Q9P2X8 69 aa7.25□□□□□ -1.25
HSPG2-202ENST00000374676 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.25□□□□□ -1.25
HSPG2-202ENST00000374676 A0A096LNI7 61 aa7.24□□□□□ -1.25
HSPG2-202ENST00000374676 PANO1I0J062 215 aa7.24□□□□□ -1.25
HSPG2-202ENST00000374676 SFTA2Q6UW10 78 aa7.24□□□□□ -1.25
HSPG2-202ENST00000374676 SPACA4Q8TDM5 124 aa7.24□□□□□ -1.25
HSPG2-202ENST00000374676 HERC2O95714 4834 aa7.24□□□□□ -1.25
HSPG2-202ENST00000374676 IGKV2-24A0A0C4DH68 120 aa7.23□□□□□ -1.25
HSPG2-202ENST00000374676 C20orf202A1L168 122 aa7.23□□□□□ -1.25
HSPG2-202ENST00000374676 NDUFC2-KCTD14E9PQ53 114 aa7.23□□□□□ -1.25
HSPG2-202ENST00000374676 CHTF8P0CG12 524 aa7.23□□□□□ -1.25
HSPG2-202ENST00000374676 AKR1D1P51857 326 aa7.23□□□□□ -1.25
HSPG2-202ENST00000374676 PTTG1IPP53801 180 aa7.23□□□□□ -1.25
HSPG2-202ENST00000374676 HERVK_113P61574 105 aa7.23□□□□□ -1.25
HSPG2-202ENST00000374676 GAGE2BQ13066 116 aa7.23□□□□□ -1.25
HSPG2-202ENST00000374676 C9orf116Q5BN46 136 aaPredicted RBP7.23□□□□□ -1.25
HSPG2-202ENST00000374676 SCXQ7RTU7 201 aa7.23□□□□□ -1.25
HSPG2-202ENST00000374676 CIRBP-AS1Q8TBR5 109 aa7.23□□□□□ -1.25
HSPG2-202ENST00000374676 LEPROTO15243 131 aa7.22□□□□□ -1.25
HSPG2-202ENST00000374676 MAJINQ3KP22 176 aa7.22□□□□□ -1.25
HSPG2-202ENST00000374676 Q6ZRP5 223 aa7.22□□□□□ -1.25
HSPG2-202ENST00000374676 PLEKHB2Q96CS7 222 aa7.22□□□□□ -1.25
HSPG2-202ENST00000374676 DPH3Q96FX2 82 aa7.22□□□□□ -1.25
HSPG2-202ENST00000374676 ZNF625Q96I27 306 aaPredicted RBP7.22□□□□□ -1.25
HSPG2-202ENST00000374676 FAT1Q14517 4588 aa7.22□□□□□ -1.25
HSPG2-202ENST00000374676 RPL18AQ02543 176 aaKnown RBP7.21□□□□□ -1.26
HSPG2-202ENST00000374676 PLAC8Q9NZF1 115 aa7.21□□□□□ -1.26
HSPG2-202ENST00000374676 A0A087WYN8 130 aa7.2□□□□□ -1.26
HSPG2-202ENST00000374676 E9PLD3 99 aa7.2□□□□□ -1.26
HSPG2-202ENST00000374676 EPM2AB3EWF7 344 aa7.19□□□□□ -1.26
HSPG2-202ENST00000374676 J3QQQ9 107 aa7.19□□□□□ -1.26
HSPG2-202ENST00000374676 HAMPP81172 84 aa7.19□□□□□ -1.26
HSPG2-202ENST00000374676 COX17Q14061 63 aa7.19□□□□□ -1.26
HSPG2-202ENST00000374676 GAGE2EQ4V326 116 aa7.19□□□□□ -1.26
HSPG2-202ENST00000374676 STPG4Q8N801 248 aa7.19□□□□□ -1.26
HSPG2-202ENST00000374676 GAGE2DQ9UEU5 116 aa7.19□□□□□ -1.26
HSPG2-202ENST00000374676 NDUFA12Q9UI09 145 aa7.19□□□□□ -1.26
HSPG2-202ENST00000374676 VPS13BQ7Z7G8 4022 aa7.18□□□□□ -1.26
HSPG2-202ENST00000374676 MYMXA0A1B0GTQ4 84 aa7.18□□□□□ -1.26
HSPG2-202ENST00000374676 NMUP48645 174 aa7.18□□□□□ -1.26
HSPG2-202ENST00000374676 TSPEAR-AS2P59090 65 aa7.18□□□□□ -1.26
HSPG2-202ENST00000374676 HERV-K104P63124 156 aa7.18□□□□□ -1.26
HSPG2-202ENST00000374676 ERG28Q9UKR5 140 aa7.18□□□□□ -1.26
HSPG2-202ENST00000374676 SRRM2Q9UQ35 2752 aaKnown RBP7.17□□□□□ -1.26
HSPG2-202ENST00000374676 A0A1W2PNN7 141 aa7.17□□□□□ -1.26
HSPG2-202ENST00000374676 SMR3BP02814 79 aaPredicted RBP7.17□□□□□ -1.26
HSPG2-202ENST00000374676 LGALS3P17931 250 aaKnown RBP7.17□□□□□ -1.26
HSPG2-202ENST00000374676 Q8N1X5 172 aa7.17□□□□□ -1.26
HSPG2-202ENST00000374676 LINC00587B1AMM8 73 aa7.16□□□□□ -1.26
HSPG2-202ENST00000374676 PFN2P35080 140 aa7.16□□□□□ -1.26
HSPG2-202ENST00000374676 C9orf129Q5T035 196 aaKnown RBP7.16□□□□□ -1.26
HSPG2-202ENST00000374676 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
HSPG2-202ENST00000374676 IGKV2D-26A0A0A0MRZ7 120 aa7.14□□□□□ -1.27
HSPG2-202ENST00000374676 SCGB1D1O95968 90 aa7.14□□□□□ -1.27
HSPG2-202ENST00000374676 ATOH7Q8N100 152 aa7.14□□□□□ -1.27
HSPG2-202ENST00000374676 XAGE1AQ9HD64 81 aa7.14□□□□□ -1.27
HSPG2-202ENST00000374676 PLA2G2DQ9UNK4 145 aa7.14□□□□□ -1.27
HSPG2-202ENST00000374676 TMA7Q9Y2S6 64 aaKnown RBP7.14□□□□□ -1.27
HSPG2-202ENST00000374676 FAM168BA1KXE4 195 aa7.13□□□□□ -1.27
HSPG2-202ENST00000374676 FAM229AH3BQW9 127 aa7.13□□□□□ -1.27
HSPG2-202ENST00000374676 SMIM13P0DJ93 91 aa7.13□□□□□ -1.27
HSPG2-202ENST00000374676 LINC00158P58513 81 aa7.13□□□□□ -1.27
HSPG2-202ENST00000374676 ANKRD39Q53RE8 183 aa7.13□□□□□ -1.27
HSPG2-202ENST00000374676 MEIG1Q5JSS6 88 aa7.13□□□□□ -1.27
HSPG2-202ENST00000374676 LINC00528Q8N1L1 170 aa7.13□□□□□ -1.27
HSPG2-202ENST00000374676 KRTAP7-1Q8IUC3 87 aa7.12□□□□□ -1.27
HSPG2-202ENST00000374676 SND1-IT1Q9HBX3 110 aa7.12□□□□□ -1.27
HSPG2-202ENST00000374676 A0A0J9YXY3 114 aa7.11□□□□□ -1.27
HSPG2-202ENST00000374676 A0A0U1RRA0 63 aa7.11□□□□□ -1.27
HSPG2-202ENST00000374676 HSBP1L1C9JCN9 74 aa7.11□□□□□ -1.27
HSPG2-202ENST00000374676 C7orf33Q8WU49 177 aa7.11□□□□□ -1.27
HSPG2-202ENST00000374676 ZNF815PA8K554 130 aa7.1□□□□□ -1.27
HSPG2-202ENST00000374676 JOSD1Q15040 202 aaPredicted RBP7.1□□□□□ -1.27
HSPG2-202ENST00000374676 SERTAD4-AS1Q5TG53 156 aa7.1□□□□□ -1.27
HSPG2-202ENST00000374676 Q5VSD8 79 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms