RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TOMM7Q9P0U1 55 aa9.1□□□□□ -0.95
PRPF4-201ENST00000374198 BRD3OSQ6XYD6 125 aa9.1□□□□□ -0.95
PRPF4-201ENST00000374198 LINC00474Q9P2X8 69 aa9.1□□□□□ -0.95
PRPF4-201ENST00000374198 TMEM256-PLSCR3K7ERE1 68 aa9.09□□□□□ -0.95
PRPF4-201ENST00000374198 LMO4P61968 165 aa9.09□□□□□ -0.95
PRPF4-201ENST00000374198 MAP1AP78559 2803 aaPredicted RBP9.09□□□□□ -0.95
PRPF4-201ENST00000374198 TRBV7-6A0A0J9YX20 115 aa9.09□□□□□ -0.95
PRPF4-201ENST00000374198 LY6G6DO95868 133 aa9.09□□□□□ -0.95
PRPF4-201ENST00000374198 SEC61GP60059 68 aa9.09□□□□□ -0.95
PRPF4-201ENST00000374198 NTM-AS1Q6ZSK4 140 aa9.09□□□□□ -0.95
PRPF4-201ENST00000374198 BRK1Q8WUW1 75 aa9.09□□□□□ -0.95
PRPF4-201ENST00000374198 V9GYY9 64 aa9.09□□□□□ -0.95
PRPF4-201ENST00000374198 ZFHX3Q15911 3703 aa9.08□□□□□ -0.96
PRPF4-201ENST00000374198 TRBV6-4A0A1B0GX49 114 aa9.08□□□□□ -0.96
PRPF4-201ENST00000374198 TEP1Q99973 2627 aaKnown RBP9.08□□□□□ -0.96
PRPF4-201ENST00000374198 HIVEP1P15822 2718 aa9.08□□□□□ -0.96
PRPF4-201ENST00000374198 IBA57-AS1B1ANH7 110 aa9.08□□□□□ -0.96
PRPF4-201ENST00000374198 RBM3P98179 157 aaKnown RBP9.08□□□□□ -0.96
PRPF4-201ENST00000374198 CFHR3Q02985 330 aa9.08□□□□□ -0.96
PRPF4-201ENST00000374198 C1orf195Q5TG92 126 aa9.08□□□□□ -0.96
PRPF4-201ENST00000374198 Q8N814 137 aa9.07□□□□□ -0.96
PRPF4-201ENST00000374198 AKAP9Q99996 3911 aa9.07□□□□□ -0.96
PRPF4-201ENST00000374198 TRAV10A0A0B4J240 114 aa9.07□□□□□ -0.96
PRPF4-201ENST00000374198 Q6ZTI0 123 aa9.07□□□□□ -0.96
PRPF4-201ENST00000374198 LINC00482Q8N8I6 264 aa9.07□□□□□ -0.96
PRPF4-201ENST00000374198 ACANP16112 2415 aa9.07□□□□□ -0.96
PRPF4-201ENST00000374198 A0A0U1RQV1 116 aa9.06□□□□□ -0.96
PRPF4-201ENST00000374198 K7EQD1 137 aa9.06□□□□□ -0.96
PRPF4-201ENST00000374198 FLNAP21333 2647 aaKnown RBP9.06□□□□□ -0.96
PRPF4-201ENST00000374198 CELSR1Q9NYQ6 3014 aa9.06□□□□□ -0.96
PRPF4-201ENST00000374198 A6NDX4 124 aa9.06□□□□□ -0.96
PRPF4-201ENST00000374198 H3BUX3 64 aa9.06□□□□□ -0.96
PRPF4-201ENST00000374198 SORL1Q92673 2214 aa9.05□□□□□ -0.96
PRPF4-201ENST00000374198 NDUFC1O43677 76 aa9.05□□□□□ -0.96
PRPF4-201ENST00000374198 BPESC1Q9GZL8 116 aa9.05□□□□□ -0.96
PRPF4-201ENST00000374198 A8MTW9 85 aa9.04□□□□□ -0.96
PRPF4-201ENST00000374198 ATP5EP56381 51 aaPredicted RBP9.04□□□□□ -0.96
PRPF4-201ENST00000374198 LINC01547P58512 204 aaPredicted RBP9.04□□□□□ -0.96
PRPF4-201ENST00000374198 SMR3AQ99954 134 aa9.04□□□□□ -0.96
PRPF4-201ENST00000374198 DSCR9P59020 149 aa9.04□□□□□ -0.96
PRPF4-201ENST00000374198 DEFB131AP59861 70 aa9.04□□□□□ -0.96
PRPF4-201ENST00000374198 MAPK1IP1LQ8NDC0 245 aa9.04□□□□□ -0.96
PRPF4-201ENST00000374198 IGHV4-30-2A0A087WSY4 118 aa9.03□□□□□ -0.96
PRPF4-201ENST00000374198 A0A096LNT2 108 aa9.02□□□□□ -0.96
PRPF4-201ENST00000374198 TMEM89A2RUT3 159 aa9.02□□□□□ -0.96
PRPF4-201ENST00000374198 UBE2L6O14933 153 aa9.02□□□□□ -0.96
PRPF4-201ENST00000374198 RNASE1P07998 156 aaKnown RBP9.02□□□□□ -0.97
PRPF4-201ENST00000374198 HAMPP81172 84 aa9.02□□□□□ -0.97
PRPF4-201ENST00000374198 Q6ZQT0 140 aa9.02□□□□□ -0.97
PRPF4-201ENST00000374198 TRBV10-1A0A0K0K1A3 114 aa9.01□□□□□ -0.97
PRPF4-201ENST00000374198 NANOS2P60321 138 aaKnown RBP9.01□□□□□ -0.97
PRPF4-201ENST00000374198 MTORP42345 2549 aa9.01□□□□□ -0.97
PRPF4-201ENST00000374198 C10orf99Q6UWK7 81 aa9□□□□□ -0.97
PRPF4-201ENST00000374198 IGHV3OR16-9A0A0B4J2B5 98 aa9□□□□□ -0.97
PRPF4-201ENST00000374198 IGHV4-38-2P0DP08 117 aa9□□□□□ -0.97
PRPF4-201ENST00000374198 Q6ZVQ6 151 aa9□□□□□ -0.97
PRPF4-201ENST00000374198 IGKV3OR2-268A0A0C4DH90 116 aa8.99□□□□□ -0.97
PRPF4-201ENST00000374198 TRBV7-4A0A0J9YYF1 115 aa8.99□□□□□ -0.97
PRPF4-201ENST00000374198 MIFP14174 115 aa8.99□□□□□ -0.97
PRPF4-201ENST00000374198 CSPG4Q6UVK1 2322 aa8.99□□□□□ -0.97
PRPF4-201ENST00000374198 LOC110117498A0A087WWA1 95 aa8.99□□□□□ -0.97
PRPF4-201ENST00000374198 TM2D3Q9BRN9 247 aa8.99□□□□□ -0.97
PRPF4-201ENST00000374198 TRGV1A0A0A0MS02 117 aa8.98□□□□□ -0.97
PRPF4-201ENST00000374198 M0R2N4 97 aa8.98□□□□□ -0.97
PRPF4-201ENST00000374198 CXCL6P80162 114 aa8.98□□□□□ -0.97
PRPF4-201ENST00000374198 Q8N3U1 123 aa8.98□□□□□ -0.97
PRPF4-201ENST00000374198 C11orf68Q9H3H3 251 aaKnown RBP8.98□□□□□ -0.97
PRPF4-201ENST00000374198 VPS13CQ709C8 3753 aa8.97□□□□□ -0.97
PRPF4-201ENST00000374198 A0A087WZ39 114 aa8.97□□□□□ -0.97
PRPF4-201ENST00000374198 FAM229BQ4G0N7 80 aa8.97□□□□□ -0.97
PRPF4-201ENST00000374198 TLN2Q9Y4G6 2542 aa8.97□□□□□ -0.97
PRPF4-201ENST00000374198 INSP01308 110 aa8.96□□□□□ -0.97
PRPF4-201ENST00000374198 PRR3P79522 188 aaKnown RBP8.96□□□□□ -0.97
PRPF4-201ENST00000374198 MPLKIPQ8TAP9 179 aa8.96□□□□□ -0.97
PRPF4-201ENST00000374198 ZNF469Q96JG9 3925 aaPredicted RBP8.96□□□□□ -0.97
PRPF4-201ENST00000374198 IGHV4-61A0A0C4DH41 118 aa8.96□□□□□ -0.98
PRPF4-201ENST00000374198 CR1P17927 2039 aa8.96□□□□□ -0.98
PRPF4-201ENST00000374198 ZNF561-AS1K7EIQ3 104 aa8.95□□□□□ -0.98
PRPF4-201ENST00000374198 C6orf226Q5I0X4 101 aa8.95□□□□□ -0.98
PRPF4-201ENST00000374198 HIVEP2P31629 2446 aa8.95□□□□□ -0.98
PRPF4-201ENST00000374198 C6orf223Q8N319 242 aa8.94□□□□□ -0.98
PRPF4-201ENST00000374198 IGLV4-60A0A075B6I1 120 aa8.94□□□□□ -0.98
PRPF4-201ENST00000374198 LAMTOR3Q9UHA4 124 aa8.94□□□□□ -0.98
PRPF4-201ENST00000374198 INAFM1C9JVW0 142 aa8.93□□□□□ -0.98
PRPF4-201ENST00000374198 IGHV4-31P0DP07 118 aa8.93□□□□□ -0.98
PRPF4-201ENST00000374198 KRTAP1-1Q07627 177 aa8.93□□□□□ -0.98
PRPF4-201ENST00000374198 IL17DQ8TAD2 202 aa8.93□□□□□ -0.98
PRPF4-201ENST00000374198 TMEM254Q8TBM7 123 aa8.93□□□□□ -0.98
PRPF4-201ENST00000374198 SETD2Q9BYW2 2564 aaPredicted RBP8.93□□□□□ -0.98
PRPF4-201ENST00000374198 C2CD3Q4AC94 2353 aa8.93□□□□□ -0.98
PRPF4-201ENST00000374198 A0A1W2PRX2 142 aa8.93□□□□□ -0.98
PRPF4-201ENST00000374198 NREPQ16612 68 aa8.93□□□□□ -0.98
PRPF4-201ENST00000374198 C6orf99Q4VX62 202 aa8.92□□□□□ -0.98
PRPF4-201ENST00000374198 LINC00575Q6W349 94 aa8.92□□□□□ -0.98
PRPF4-201ENST00000374198 ZANQ9Y493 2812 aa8.92□□□□□ -0.98
PRPF4-201ENST00000374198 MAP6D1Q9H9H5 199 aa8.91□□□□□ -0.98
PRPF4-201ENST00000374198 ERC2-IT1O76042 136 aa8.9□□□□□ -0.98
PRPF4-201ENST00000374198 SONP18583 2426 aaKnown RBP8.9□□□□□ -0.98
PRPF4-201ENST00000374198 PDE6GP18545 87 aa8.9□□□□□ -0.98
PRPF4-201ENST00000374198 C9orf66Q5T8R8 295 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms