RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 Q8IZM0 81 aa7.6□□□□□ -1.19
HDAC8-201ENST00000373554 C6orf48Q9UBA6 75 aa7.6□□□□□ -1.19
HDAC8-201ENST00000373554 IGLV5-45A0A087WSX0 123 aa7.59□□□□□ -1.19
HDAC8-201ENST00000373554 TRBV30A0A0K0K1B3 111 aa7.59□□□□□ -1.19
HDAC8-201ENST00000373554 HSBP1O75506 76 aa7.59□□□□□ -1.19
HDAC8-201ENST00000373554 C6orf226Q5I0X4 101 aa7.59□□□□□ -1.19
HDAC8-201ENST00000373554 C2orf82Q6UX34 121 aa7.59□□□□□ -1.19
HDAC8-201ENST00000373554 SMIM1B2RUZ4 78 aa7.58□□□□□ -1.2
HDAC8-201ENST00000373554 H3BRM9 83 aa7.58□□□□□ -1.2
HDAC8-201ENST00000373554 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
HDAC8-201ENST00000373554 COLCA2A8K830 154 aa7.57□□□□□ -1.2
HDAC8-201ENST00000373554 TLX1NBP0CAT3 122 aa7.57□□□□□ -1.2
HDAC8-201ENST00000373554 IGLC3P0DOY3 106 aa7.57□□□□□ -1.2
HDAC8-201ENST00000373554 CXCL5P42830 114 aa7.57□□□□□ -1.2
HDAC8-201ENST00000373554 NDUFC2-KCTD14E9PQ53 114 aa7.56□□□□□ -1.2
HDAC8-201ENST00000373554 F8VRH5 84 aa7.56□□□□□ -1.2
HDAC8-201ENST00000373554 Q6ZRP5 223 aa7.56□□□□□ -1.2
HDAC8-201ENST00000373554 SPINK8P0C7L1 97 aa7.55□□□□□ -1.2
HDAC8-201ENST00000373554 C9orf116Q5BN46 136 aaPredicted RBP7.55□□□□□ -1.2
HDAC8-201ENST00000373554 COX7B2Q8TF08 81 aa7.55□□□□□ -1.2
HDAC8-201ENST00000373554 IFI27L1Q96BM0 104 aa7.55□□□□□ -1.2
HDAC8-201ENST00000373554 VPS13BQ7Z7G8 4022 aa7.55□□□□□ -1.2
HDAC8-201ENST00000373554 SCO1O75880 301 aa7.54□□□□□ -1.2
HDAC8-201ENST00000373554 SERF1AO75920 110 aa7.54□□□□□ -1.2
HDAC8-201ENST00000373554 GAGE2EQ4V326 116 aa7.54□□□□□ -1.2
HDAC8-201ENST00000373554 GAGE2DQ9UEU5 116 aa7.54□□□□□ -1.2
HDAC8-201ENST00000373554 A0A1W2PNN7 141 aa7.53□□□□□ -1.2
HDAC8-201ENST00000373554 ZNF22P17026 224 aaPredicted RBP7.53□□□□□ -1.2
HDAC8-201ENST00000373554 FAM19A2Q8N3H0 131 aa7.53□□□□□ -1.2
HDAC8-201ENST00000373554 CHTOPQ9Y3Y2 248 aaKnown RBP7.53□□□□□ -1.2
HDAC8-201ENST00000373554 FLG2Q5D862 2391 aaPredicted RBP7.52□□□□□ -1.21
HDAC8-201ENST00000373554 TRAV12-1A0A0B4J245 112 aa7.52□□□□□ -1.21
HDAC8-201ENST00000373554 C11orf86A6NJI1 115 aa7.52□□□□□ -1.21
HDAC8-201ENST00000373554 TMEM170BQ5T4T1 132 aa7.52□□□□□ -1.21
HDAC8-201ENST00000373554 IGLV5-39A0A0G2JS06 123 aa7.51□□□□□ -1.21
HDAC8-201ENST00000373554 LEPROTL1O95214 131 aa7.51□□□□□ -1.21
HDAC8-201ENST00000373554 LINC00310P59036 64 aa7.51□□□□□ -1.21
HDAC8-201ENST00000373554 PRR3P79522 188 aaKnown RBP7.51□□□□□ -1.21
HDAC8-201ENST00000373554 FAM19A5Q7Z5A7 132 aaPredicted RBP7.51□□□□□ -1.21
HDAC8-201ENST00000373554 DMBT1Q9UGM3 2413 aaPredicted RBP7.5□□□□□ -1.21
HDAC8-201ENST00000373554 FAM168BA1KXE4 195 aa7.49□□□□□ -1.21
HDAC8-201ENST00000373554 H0Y8G0 127 aa7.49□□□□□ -1.21
HDAC8-201ENST00000373554 HNRNPA3P51991 378 aaKnown RBP7.49□□□□□ -1.21
HDAC8-201ENST00000373554 HSPB8Q9UJY1 196 aa7.49□□□□□ -1.21
HDAC8-201ENST00000373554 MYCBP2O75592 4640 aa7.48□□□□□ -1.21
HDAC8-201ENST00000373554 J3QL48 77 aa7.48□□□□□ -1.21
HDAC8-201ENST00000373554 M0QXV9 152 aa7.48□□□□□ -1.21
HDAC8-201ENST00000373554 C9orf129Q5T035 196 aaKnown RBP7.48□□□□□ -1.21
HDAC8-201ENST00000373554 SFTA2Q6UW10 78 aa7.48□□□□□ -1.21
HDAC8-201ENST00000373554 PHF5AQ7RTV0 110 aaKnown RBP7.48□□□□□ -1.21
HDAC8-201ENST00000373554 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 FABP4P15090 132 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
HDAC8-201ENST00000373554 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 XAGE1AQ9HD64 81 aa7.47□□□□□ -1.21
HDAC8-201ENST00000373554 KRTAP29-1A8MX34 341 aaPredicted RBP7.46□□□□□ -1.22
HDAC8-201ENST00000373554 NUPR1O60356 82 aa7.46□□□□□ -1.22
HDAC8-201ENST00000373554 ODF1Q14990 250 aa7.46□□□□□ -1.22
HDAC8-201ENST00000373554 TMEM223A0PJW6 202 aa7.45□□□□□ -1.22
HDAC8-201ENST00000373554 OXTP01178 125 aa7.45□□□□□ -1.22
HDAC8-201ENST00000373554 PLNP26678 52 aa7.45□□□□□ -1.22
HDAC8-201ENST00000373554 UBE2BP63146 152 aa7.45□□□□□ -1.22
HDAC8-201ENST00000373554 PSORS1C2Q9UIG4 136 aa7.45□□□□□ -1.22
HDAC8-201ENST00000373554 PFN2P35080 140 aa7.44□□□□□ -1.22
HDAC8-201ENST00000373554 KRTAP7-1Q8IUC3 87 aa7.44□□□□□ -1.22
HDAC8-201ENST00000373554 MAP1LC3CQ9BXW4 147 aa7.44□□□□□ -1.22
HDAC8-201ENST00000373554 S100A1P23297 94 aa7.43□□□□□ -1.22
HDAC8-201ENST00000373554 C1orf137Q5JT78 98 aa7.43□□□□□ -1.22
HDAC8-201ENST00000373554 SERTAD4-AS1Q5TG53 156 aa7.43□□□□□ -1.22
HDAC8-201ENST00000373554 ZNF625Q96I27 306 aaPredicted RBP7.43□□□□□ -1.22
HDAC8-201ENST00000373554 ERG28Q9UKR5 140 aa7.43□□□□□ -1.22
HDAC8-201ENST00000373554 DPM2O94777 84 aa7.42□□□□□ -1.22
HDAC8-201ENST00000373554 COX17Q14061 63 aa7.42□□□□□ -1.22
HDAC8-201ENST00000373554 SPINK6Q6UWN8 80 aa7.42□□□□□ -1.22
HDAC8-201ENST00000373554 LBHQ53QV2 105 aaPredicted RBP7.41□□□□□ -1.22
HDAC8-201ENST00000373554 TP73-AS1Q9UF72 201 aa7.41□□□□□ -1.22
HDAC8-201ENST00000373554 C22orf24Q9Y442 160 aa7.41□□□□□ -1.22
HDAC8-201ENST00000373554 KRTAP9-6A0A140TA67 174 aa7.4□□□□□ -1.22
HDAC8-201ENST00000373554 ATP6V1G1O75348 118 aa7.4□□□□□ -1.22
HDAC8-201ENST00000373554 IGKCP01834 107 aa7.4□□□□□ -1.22
HDAC8-201ENST00000373554 HERVK_113P61574 105 aa7.4□□□□□ -1.22
HDAC8-201ENST00000373554 MRPL55Q7Z7F7 128 aaKnown RBP7.4□□□□□ -1.22
HDAC8-201ENST00000373554 PMCHL2Q9BQD1 86 aa7.4□□□□□ -1.22
HDAC8-201ENST00000373554 PLA2G2DQ9UNK4 145 aa7.4□□□□□ -1.22
HDAC8-201ENST00000373554 REG3GQ6UW15 175 aa7.39□□□□□ -1.23
HDAC8-201ENST00000373554 KRTAP11-1Q8IUC1 163 aa7.39□□□□□ -1.23
HDAC8-201ENST00000373554 NKAPP1Q8N9T2 125 aa7.39□□□□□ -1.23
HDAC8-201ENST00000373554 SND1-IT1Q9HBX3 110 aa7.39□□□□□ -1.23
HDAC8-201ENST00000373554 SYS1-DBNDD2H3BUS1 97 aa7.38□□□□□ -1.23
HDAC8-201ENST00000373554 IGLV7-43P04211 117 aa7.38□□□□□ -1.23
HDAC8-201ENST00000373554 LINC00158P58513 81 aa7.38□□□□□ -1.23
HDAC8-201ENST00000373554 HERV-K104P63124 156 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms