RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 FCER1GP30273 86 aa2.59□□□□□ -2
MCF2-203ENST00000370576 UBE2BP63146 152 aa2.59□□□□□ -2
MCF2-203ENST00000370576 OR10AG1Q8NH19 301 aa2.59□□□□□ -2
MCF2-203ENST00000370576 NXT2Q9NPJ8 142 aaKnown RBP2.59□□□□□ -2
MCF2-203ENST00000370576 HIGD1BQ9P298 99 aa2.59□□□□□ -2
MCF2-203ENST00000370576 AGRNO00468 2067 aa2.59□□□□□ -2
MCF2-203ENST00000370576 ZANQ9Y493 2812 aa2.59□□□□□ -2
MCF2-203ENST00000370576 TRBV10-1A0A0K0K1A3 114 aa2.58□□□□□ -2
MCF2-203ENST00000370576 LY6EQ16553 131 aa2.58□□□□□ -2
MCF2-203ENST00000370576 Q6ZR54 194 aa2.58□□□□□ -2
MCF2-203ENST00000370576 UBE2L6O14933 153 aa2.58□□□□□ -2
MCF2-203ENST00000370576 IGHV3-11P01762 117 aa2.58□□□□□ -2
MCF2-203ENST00000370576 CFAP126Q5VTH2 177 aa2.58□□□□□ -2
MCF2-203ENST00000370576 TMEM263Q8WUH6 116 aaKnown RBP2.58□□□□□ -2
MCF2-203ENST00000370576 CHCHD7Q9BUK0 85 aa2.58□□□□□ -2
MCF2-203ENST00000370576 IGLV4-69A0A075B6H9 119 aa2.58□□□□□ -2
MCF2-203ENST00000370576 IGLV4-3A0A075B6K6 122 aa2.58□□□□□ -2
MCF2-203ENST00000370576 TRACP01848 142 aa2.58□□□□□ -2
MCF2-203ENST00000370576 HINT1P49773 126 aaPredicted RBP2.58□□□□□ -2
MCF2-203ENST00000370576 SEC11AP67812 179 aa2.58□□□□□ -2
MCF2-203ENST00000370576 CXCL6P80162 114 aa2.58□□□□□ -2
MCF2-203ENST00000370576 SMIM29Q86T20 159 aa2.58□□□□□ -2
MCF2-203ENST00000370576 ORMDL3Q8N138 153 aa2.58□□□□□ -2
MCF2-203ENST00000370576 Q8NAQ8 132 aa2.58□□□□□ -2
MCF2-203ENST00000370576 CMTM2Q8TAZ6 248 aa2.58□□□□□ -2
MCF2-203ENST00000370576 SACSQ9NZJ4 4579 aa2.58□□□□□ -2
MCF2-203ENST00000370576 NSD1Q96L73 2696 aaPredicted RBP2.58□□□□□ -2
MCF2-203ENST00000370576 WFDC2Q14508 124 aa2.57□□□□□ -2
MCF2-203ENST00000370576 C15orf53Q8NAA6 179 aa2.57□□□□□ -2
MCF2-203ENST00000370576 DHRS4-AS1Q9P1J3 65 aa2.57□□□□□ -2
MCF2-203ENST00000370576 TRBV6-4A0A1B0GX49 114 aa2.57□□□□□ -2
MCF2-203ENST00000370576 GAS8-AS1O95177 125 aa2.57□□□□□ -2
MCF2-203ENST00000370576 NPYP01303 97 aa2.57□□□□□ -2
MCF2-203ENST00000370576 P0C880 135 aa2.57□□□□□ -2
MCF2-203ENST00000370576 APELAP0DMC3 54 aa2.57□□□□□ -2
MCF2-203ENST00000370576 ORMDL2Q53FV1 153 aa2.57□□□□□ -2
MCF2-203ENST00000370576 Q8N1X5 172 aa2.57□□□□□ -2
MCF2-203ENST00000370576 SMIM2Q9BVW6 85 aa2.57□□□□□ -2
MCF2-203ENST00000370576 STARD9Q9P2P6 4700 aa2.57□□□□□ -2
MCF2-203ENST00000370576 RPS10P46783 165 aaKnown RBP2.57□□□□□ -2
MCF2-203ENST00000370576 SCXQ7RTU7 201 aa2.57□□□□□ -2
MCF2-203ENST00000370576 Q8TAT8 98 aa2.57□□□□□ -2
MCF2-203ENST00000370576 C16orf74Q96GX8 76 aa2.57□□□□□ -2
MCF2-203ENST00000370576 TMEM141Q96I45 108 aa2.57□□□□□ -2
MCF2-203ENST00000370576 S4R3C0 116 aa2.57□□□□□ -2
MCF2-203ENST00000370576 PLECQ15149 4684 aaKnown RBP2.57□□□□□ -2
MCF2-203ENST00000370576 C3orf79P0CE67 100 aa2.56□□□□□ -2
MCF2-203ENST00000370576 FABP2P12104 132 aa2.56□□□□□ -2
MCF2-203ENST00000370576 UBE2D3P61077 147 aa2.56□□□□□ -2
MCF2-203ENST00000370576 UBE2D2P62837 147 aa2.56□□□□□ -2
MCF2-203ENST00000370576 PMCHL1Q16048 86 aa2.56□□□□□ -2
MCF2-203ENST00000370576 KRTAP26-1Q6PEX3 210 aa2.56□□□□□ -2
MCF2-203ENST00000370576 C2orf91Q6ZV80 131 aa2.56□□□□□ -2
MCF2-203ENST00000370576 NOTCH2Q04721 2471 aa2.56□□□□□ -2
MCF2-203ENST00000370576 F8P00451 2351 aa2.56□□□□□ -2
MCF2-203ENST00000370576 MUC21A0A140T8X8 626 aa2.56□□□□□ -2
MCF2-203ENST00000370576 KRTAP24-1Q3LI83 254 aa2.56□□□□□ -2
MCF2-203ENST00000370576 SUMO4Q6EEV6 95 aa2.56□□□□□ -2
MCF2-203ENST00000370576 IGLV5-39A0A0G2JS06 123 aa2.56□□□□□ -2
MCF2-203ENST00000370576 DEFB121Q5J5C9 76 aa2.56□□□□□ -2
MCF2-203ENST00000370576 MAPK1IP1LQ8NDC0 245 aa2.56□□□□□ -2
MCF2-203ENST00000370576 RAB37Q96AX2 223 aa2.56□□□□□ -2
MCF2-203ENST00000370576 C2CD3Q4AC94 2353 aa2.56□□□□□ -2
MCF2-203ENST00000370576 D6R8Y8 96 aa2.55□□□□□ -2
MCF2-203ENST00000370576 KRTAP10-11P60412 298 aa2.55□□□□□ -2
MCF2-203ENST00000370576 KLHL30-AS1Q8NEE0 82 aa2.55□□□□□ -2
MCF2-203ENST00000370576 AP1S3Q96PC3 154 aa2.55□□□□□ -2
MCF2-203ENST00000370576 PMCHL2Q9BQD1 86 aa2.55□□□□□ -2
MCF2-203ENST00000370576 LINC00474Q9P2X8 69 aa2.55□□□□□ -2
MCF2-203ENST00000370576 VPS13BQ7Z7G8 4022 aa2.55□□□□□ -2
MCF2-203ENST00000370576 IGLV8-61A0A075B6I0 122 aa2.55□□□□□ -2
MCF2-203ENST00000370576 A0A1B0GUV1 79 aa2.55□□□□□ -2
MCF2-203ENST00000370576 C11orf86A6NJI1 115 aa2.55□□□□□ -2
MCF2-203ENST00000370576 INSP01308 110 aa2.55□□□□□ -2
MCF2-203ENST00000370576 FHL2Q14192 279 aa2.55□□□□□ -2
MCF2-203ENST00000370576 ATP11AUNQ6ZP68 121 aa2.55□□□□□ -2
MCF2-203ENST00000370576 BIRC6Q9NR09 4857 aa2.55□□□□□ -2
MCF2-203ENST00000370576 FUSP35637 526 aaKnown RBP eCLIP2.55□□□□□ -2
MCF2-203ENST00000370576 IGFL4Q6B9Z1 124 aa2.55□□□□□ -2
MCF2-203ENST00000370576 LITAFQ99732 161 aa2.55□□□□□ -2
MCF2-203ENST00000370576 SMR3AQ99954 134 aa2.55□□□□□ -2
MCF2-203ENST00000370576 TIMM17BO60830 172 aa2.54□□□□□ -2
MCF2-203ENST00000370576 UBE2D4Q9Y2X8 147 aa2.54□□□□□ -2
MCF2-203ENST00000370576 A0A0J9YXY3 114 aa2.54□□□□□ -2
MCF2-203ENST00000370576 IGKCP01834 107 aa2.54□□□□□ -2
MCF2-203ENST00000370576 CCKP06307 115 aa2.54□□□□□ -2
MCF2-203ENST00000370576 COX8AP10176 69 aa2.54□□□□□ -2
MCF2-203ENST00000370576 IFI27P40305 119 aaPredicted RBP2.54□□□□□ -2
MCF2-203ENST00000370576 FAM229BQ4G0N7 80 aa2.54□□□□□ -2
MCF2-203ENST00000370576 MPV17L2Q567V2 206 aa2.54□□□□□ -2
MCF2-203ENST00000370576 SH2D6Q7Z4S9 175 aa2.54□□□□□ -2
MCF2-203ENST00000370576 C20orf203Q8NBC4 194 aa2.54□□□□□ -2
MCF2-203ENST00000370576 RYR3Q15413 4870 aa2.54□□□□□ -2
MCF2-203ENST00000370576 LEPROTO15243 131 aa2.54□□□□□ -2
MCF2-203ENST00000370576 MIFP14174 115 aa2.54□□□□□ -2
MCF2-203ENST00000370576 SPATA45Q537H7 98 aa2.54□□□□□ -2
MCF2-203ENST00000370576 PRR34Q9NV39 138 aa2.54□□□□□ -2
MCF2-203ENST00000370576 IGHV3-66A0A0C4DH42 116 aa2.53□□□□□ -2
MCF2-203ENST00000370576 MGST1P10620 155 aaKnown RBP2.53□□□□□ -2
MCF2-203ENST00000370576 NPC2P61916 151 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms