RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TRAV12-1A0A0B4J245 112 aa9.49□□□□□ -0.89
COL9A1-204ENST00000370496 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
COL9A1-204ENST00000370496 PANO1I0J062 215 aa9.49□□□□□ -0.89
COL9A1-204ENST00000370496 NUPR1O60356 82 aa9.49□□□□□ -0.89
COL9A1-204ENST00000370496 SMR3BP02814 79 aaPredicted RBP9.49□□□□□ -0.89
COL9A1-204ENST00000370496 KIAA0087Q14695 138 aa9.49□□□□□ -0.89
COL9A1-204ENST00000370496 Q8N1X5 172 aa9.49□□□□□ -0.89
COL9A1-204ENST00000370496 SPACA4Q8TDM5 124 aa9.49□□□□□ -0.89
COL9A1-204ENST00000370496 DNAH8Q96JB1 4490 aa9.48□□□□□ -0.89
COL9A1-204ENST00000370496 C11orf86A6NJI1 115 aa9.48□□□□□ -0.89
COL9A1-204ENST00000370496 FABP4P15090 132 aa9.48□□□□□ -0.89
COL9A1-204ENST00000370496 ZNF22P17026 224 aaPredicted RBP9.48□□□□□ -0.89
COL9A1-204ENST00000370496 MAJINQ3KP22 176 aa9.48□□□□□ -0.89
COL9A1-204ENST00000370496 C6orf226Q5I0X4 101 aa9.48□□□□□ -0.89
COL9A1-204ENST00000370496 C10orf25Q5T742 122 aa9.48□□□□□ -0.89
COL9A1-204ENST00000370496 C2orf82Q6UX34 121 aa9.48□□□□□ -0.89
COL9A1-204ENST00000370496 UNQ6190/PRO20217Q6UXQ8 127 aa9.48□□□□□ -0.89
COL9A1-204ENST00000370496 GAGE2BQ13066 116 aa9.47□□□□□ -0.89
COL9A1-204ENST00000370496 CIRBPQ14011 172 aaKnown RBP9.47□□□□□ -0.89
COL9A1-204ENST00000370496 RNF151Q2KHN1 245 aa9.47□□□□□ -0.89
COL9A1-204ENST00000370496 TMEM170BQ5T4T1 132 aa9.47□□□□□ -0.89
COL9A1-204ENST00000370496 COX7B2Q8TF08 81 aa9.47□□□□□ -0.89
COL9A1-204ENST00000370496 LINC00474Q9P2X8 69 aa9.47□□□□□ -0.89
COL9A1-204ENST00000370496 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
COL9A1-204ENST00000370496 TRBV30A0A0K0K1B3 111 aa9.46□□□□□ -0.9
COL9A1-204ENST00000370496 F8VRH5 84 aa9.46□□□□□ -0.9
COL9A1-204ENST00000370496 CXCL5P42830 114 aa9.46□□□□□ -0.9
COL9A1-204ENST00000370496 Q5VSD8 79 aa9.46□□□□□ -0.9
COL9A1-204ENST00000370496 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
COL9A1-204ENST00000370496 PTTG1IPP53801 180 aa9.45□□□□□ -0.9
COL9A1-204ENST00000370496 LINC00528Q8N1L1 170 aa9.45□□□□□ -0.9
COL9A1-204ENST00000370496 FAM229AH3BQW9 127 aa9.44□□□□□ -0.9
COL9A1-204ENST00000370496 A0A087WYN8 130 aa9.43□□□□□ -0.9
COL9A1-204ENST00000370496 ODF1Q14990 250 aa9.43□□□□□ -0.9
COL9A1-204ENST00000370496 STPG4Q8N801 248 aa9.43□□□□□ -0.9
COL9A1-204ENST00000370496 MAP1LC3CQ9BXW4 147 aa9.43□□□□□ -0.9
COL9A1-204ENST00000370496 IGLV5-39A0A0G2JS06 123 aa9.41□□□□□ -0.9
COL9A1-204ENST00000370496 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
COL9A1-204ENST00000370496 KRTAP17-1Q9BYP8 105 aa9.41□□□□□ -0.9
COL9A1-204ENST00000370496 PLAC8Q9NZF1 115 aa9.41□□□□□ -0.9
COL9A1-204ENST00000370496 NDUFC2-KCTD14E9PQ53 114 aa9.4□□□□□ -0.9
COL9A1-204ENST00000370496 PLNP26678 52 aa9.4□□□□□ -0.9
COL9A1-204ENST00000370496 GAGE2EQ4V326 116 aa9.4□□□□□ -0.9
COL9A1-204ENST00000370496 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.9
COL9A1-204ENST00000370496 COA6Q5JTJ3 125 aaKnown RBP9.4□□□□□ -0.9
COL9A1-204ENST00000370496 GAGE2DQ9UEU5 116 aa9.4□□□□□ -0.9
COL9A1-204ENST00000370496 Q6ZRP5 223 aa9.39□□□□□ -0.91
COL9A1-204ENST00000370496 TMEM223A0PJW6 202 aa9.38□□□□□ -0.91
COL9A1-204ENST00000370496 DPM2O94777 84 aa9.38□□□□□ -0.91
COL9A1-204ENST00000370496 PLA2G1BP04054 148 aaKnown RBP9.38□□□□□ -0.91
COL9A1-204ENST00000370496 PMCHL2Q9BQD1 86 aa9.38□□□□□ -0.91
COL9A1-204ENST00000370496 KRTAP4-5Q9BYR2 181 aa9.38□□□□□ -0.91
COL9A1-204ENST00000370496 C7orf33Q8WU49 177 aa9.37□□□□□ -0.91
COL9A1-204ENST00000370496 SYS1-DBNDD2H3BUS1 97 aa9.37□□□□□ -0.91
COL9A1-204ENST00000370496 IGKCP01834 107 aa9.37□□□□□ -0.91
COL9A1-204ENST00000370496 RPL37AP61513 92 aaKnown RBP9.36□□□□□ -0.91
COL9A1-204ENST00000370496 SFTA2Q6UW10 78 aa9.36□□□□□ -0.91
COL9A1-204ENST00000370496 HERVK_113P61574 105 aa9.35□□□□□ -0.91
COL9A1-204ENST00000370496 FAT1Q14517 4588 aa9.34□□□□□ -0.91
COL9A1-204ENST00000370496 KRTDAPP60985 99 aa9.34□□□□□ -0.91
COL9A1-204ENST00000370496 FAM19A5Q7Z5A7 132 aaPredicted RBP9.34□□□□□ -0.91
COL9A1-204ENST00000370496 A0A1W2PNN7 141 aa9.33□□□□□ -0.92
COL9A1-204ENST00000370496 S100A6P06703 90 aa9.33□□□□□ -0.92
COL9A1-204ENST00000370496 PET117Q6UWS5 81 aa9.33□□□□□ -0.92
COL9A1-204ENST00000370496 FAM168BA1KXE4 195 aa9.32□□□□□ -0.92
COL9A1-204ENST00000370496 PFN2P35080 140 aa9.32□□□□□ -0.92
COL9A1-204ENST00000370496 C9orf129Q5T035 196 aaKnown RBP9.32□□□□□ -0.92
COL9A1-204ENST00000370496 ZNF625Q96I27 306 aaPredicted RBP9.32□□□□□ -0.92
COL9A1-204ENST00000370496 XAGE1AQ9HD64 81 aa9.32□□□□□ -0.92
COL9A1-204ENST00000370496 ERG28Q9UKR5 140 aa9.32□□□□□ -0.92
COL9A1-204ENST00000370496 C3orf79P0CE67 100 aa9.31□□□□□ -0.92
COL9A1-204ENST00000370496 S100A2P29034 98 aa9.31□□□□□ -0.92
COL9A1-204ENST00000370496 LINC01545Q5VT33 79 aa9.31□□□□□ -0.92
COL9A1-204ENST00000370496 C20orf202A1L168 122 aa9.3□□□□□ -0.92
COL9A1-204ENST00000370496 INAFM2P0DMQ5 153 aa9.3□□□□□ -0.92
COL9A1-204ENST00000370496 PLEKHB2Q96CS7 222 aa9.3□□□□□ -0.92
COL9A1-204ENST00000370496 M0QXV9 152 aa9.29□□□□□ -0.92
COL9A1-204ENST00000370496 LEPROTO15243 131 aa9.29□□□□□ -0.92
COL9A1-204ENST00000370496 LGALS3P17931 250 aaKnown RBP9.28□□□□□ -0.92
COL9A1-204ENST00000370496 COX17Q14061 63 aa9.28□□□□□ -0.92
COL9A1-204ENST00000370496 MEIG1Q5JSS6 88 aa9.28□□□□□ -0.92
COL9A1-204ENST00000370496 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
COL9A1-204ENST00000370496 HIST3H2BBQ8N257 126 aa9.28□□□□□ -0.92
COL9A1-204ENST00000370496 NDUFA12Q9UI09 145 aa9.28□□□□□ -0.92
COL9A1-204ENST00000370496 VPS13BQ7Z7G8 4022 aa9.28□□□□□ -0.92
COL9A1-204ENST00000370496 ABCA13Q86UQ4 5058 aa9.28□□□□□ -0.92
COL9A1-204ENST00000370496 TSPEAR-AS2P59090 65 aa9.27□□□□□ -0.93
COL9A1-204ENST00000370496 HERV-K104P63124 156 aa9.27□□□□□ -0.93
COL9A1-204ENST00000370496 MYMXA0A1B0GTQ4 84 aa9.26□□□□□ -0.93
COL9A1-204ENST00000370496 J3QQQ9 107 aa9.26□□□□□ -0.93
COL9A1-204ENST00000370496 KRTAP10-4P60372 401 aaPredicted RBP9.26□□□□□ -0.93
COL9A1-204ENST00000370496 PRR3P79522 188 aaKnown RBP9.26□□□□□ -0.93
COL9A1-204ENST00000370496 HIST1H2BLQ99880 126 aa9.26□□□□□ -0.93
COL9A1-204ENST00000370496 SRRM2Q9UQ35 2752 aaKnown RBP9.26□□□□□ -0.93
COL9A1-204ENST00000370496 LINC00158P58513 81 aa9.25□□□□□ -0.93
COL9A1-204ENST00000370496 UBE2BP63146 152 aa9.25□□□□□ -0.93
COL9A1-204ENST00000370496 SERTAD4-AS1Q5TG53 156 aa9.25□□□□□ -0.93
COL9A1-204ENST00000370496 A0A0U1RRA0 63 aa9.24□□□□□ -0.93
COL9A1-204ENST00000370496 E9PLD3 99 aa9.24□□□□□ -0.93
COL9A1-204ENST00000370496 NMUP48645 174 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms