RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 C2orf48Q96LS8 159 aa8.25□□□□□ -1.09
EFNA1-201ENST00000368406 CNBPP62633 177 aaKnown RBP8.24□□□□□ -1.09
EFNA1-201ENST00000368406 ATOH7Q8N100 152 aa8.24□□□□□ -1.09
EFNA1-201ENST00000368406 F8WDY8 70 aa8.23□□□□□ -1.09
EFNA1-201ENST00000368406 CXCL5P42830 114 aa8.23□□□□□ -1.09
EFNA1-201ENST00000368406 RYR1P21817 5038 aa8.23□□□□□ -1.09
EFNA1-201ENST00000368406 IGLV5-39A0A0G2JS06 123 aa8.22□□□□□ -1.09
EFNA1-201ENST00000368406 GCSHP23434 173 aa8.22□□□□□ -1.09
EFNA1-201ENST00000368406 C2orf82Q6UX34 121 aa8.22□□□□□ -1.09
EFNA1-201ENST00000368406 Q6ZRU5 148 aa8.22□□□□□ -1.09
EFNA1-201ENST00000368406 KIAA0087Q14695 138 aa8.21□□□□□ -1.09
EFNA1-201ENST00000368406 LINC01620Q4KN68 170 aa8.21□□□□□ -1.09
EFNA1-201ENST00000368406 PLEKHB2Q96CS7 222 aa8.21□□□□□ -1.09
EFNA1-201ENST00000368406 PKIGQ9Y2B9 76 aa8.21□□□□□ -1.09
EFNA1-201ENST00000368406 APOBP04114 4563 aaKnown RBP8.21□□□□□ -1.1
EFNA1-201ENST00000368406 HSBP1L1C9JCN9 74 aa8.2□□□□□ -1.1
EFNA1-201ENST00000368406 LEPROTO15243 131 aa8.2□□□□□ -1.1
EFNA1-201ENST00000368406 SLPIP03973 132 aa8.2□□□□□ -1.1
EFNA1-201ENST00000368406 LGALS3P17931 250 aaKnown RBP8.2□□□□□ -1.1
EFNA1-201ENST00000368406 UNQ6190/PRO20217Q6UXQ8 127 aa8.2□□□□□ -1.1
EFNA1-201ENST00000368406 KRTAP10-1P60331 282 aa8.2□□□□□ -1.1
EFNA1-201ENST00000368406 RPL18AQ02543 176 aaKnown RBP8.2□□□□□ -1.1
EFNA1-201ENST00000368406 SFTA2Q6UW10 78 aa8.2□□□□□ -1.1
EFNA1-201ENST00000368406 STPG4Q8N801 248 aa8.2□□□□□ -1.1
EFNA1-201ENST00000368406 C9orf163Q8N9P6 203 aa8.2□□□□□ -1.1
EFNA1-201ENST00000368406 HSPG2P98160 4391 aa8.19□□□□□ -1.1
EFNA1-201ENST00000368406 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
EFNA1-201ENST00000368406 C10orf25Q5T742 122 aa8.19□□□□□ -1.1
EFNA1-201ENST00000368406 LOC107984640A0A0U1RRK4 108 aa8.18□□□□□ -1.1
EFNA1-201ENST00000368406 E9PLD3 99 aa8.18□□□□□ -1.1
EFNA1-201ENST00000368406 J3QQQ9 107 aa8.18□□□□□ -1.1
EFNA1-201ENST00000368406 C6orf48Q9UBA6 75 aa8.18□□□□□ -1.1
EFNA1-201ENST00000368406 NMUP48645 174 aa8.17□□□□□ -1.1
EFNA1-201ENST00000368406 RNF151Q2KHN1 245 aa8.17□□□□□ -1.1
EFNA1-201ENST00000368406 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
EFNA1-201ENST00000368406 NDUFA12Q9UI09 145 aa8.17□□□□□ -1.1
EFNA1-201ENST00000368406 MYMXA0A1B0GTQ4 84 aa8.16□□□□□ -1.1
EFNA1-201ENST00000368406 TSPEAR-AS2P59090 65 aa8.16□□□□□ -1.1
EFNA1-201ENST00000368406 C9orf116Q5BN46 136 aaPredicted RBP8.16□□□□□ -1.1
EFNA1-201ENST00000368406 IGKV2-24A0A0C4DH68 120 aa8.15□□□□□ -1.1
EFNA1-201ENST00000368406 GAGE2BQ13066 116 aa8.15□□□□□ -1.1
EFNA1-201ENST00000368406 MEIG1Q5JSS6 88 aa8.15□□□□□ -1.1
EFNA1-201ENST00000368406 DPH3Q96FX2 82 aa8.15□□□□□ -1.1
EFNA1-201ENST00000368406 PFN2P35080 140 aa8.14□□□□□ -1.11
EFNA1-201ENST00000368406 HERV-K104P63124 156 aa8.14□□□□□ -1.11
EFNA1-201ENST00000368406 JOSD1Q15040 202 aaPredicted RBP8.14□□□□□ -1.11
EFNA1-201ENST00000368406 MAJINQ3KP22 176 aa8.14□□□□□ -1.11
EFNA1-201ENST00000368406 ANKRD39Q53RE8 183 aa8.14□□□□□ -1.11
EFNA1-201ENST00000368406 XGP55808 180 aa8.13□□□□□ -1.11
EFNA1-201ENST00000368406 GAGE2EQ4V326 116 aa8.13□□□□□ -1.11
EFNA1-201ENST00000368406 GAGE2DQ9UEU5 116 aa8.13□□□□□ -1.11
EFNA1-201ENST00000368406 ERG28Q9UKR5 140 aa8.13□□□□□ -1.11
EFNA1-201ENST00000368406 A0A096LNI7 61 aa8.12□□□□□ -1.11
EFNA1-201ENST00000368406 IGKV2D-26A0A0A0MRZ7 120 aa8.12□□□□□ -1.11
EFNA1-201ENST00000368406 ZNF815PA8K554 130 aa8.12□□□□□ -1.11
EFNA1-201ENST00000368406 NDUFC2-KCTD14E9PQ53 114 aa8.12□□□□□ -1.11
EFNA1-201ENST00000368406 SDIM1Q6ZPB5 146 aa8.12□□□□□ -1.11
EFNA1-201ENST00000368406 VAMP8Q9BV40 100 aa8.12□□□□□ -1.11
EFNA1-201ENST00000368406 LINC00474Q9P2X8 69 aa8.12□□□□□ -1.11
EFNA1-201ENST00000368406 A0A0U1RRA0 63 aa8.12□□□□□ -1.11
EFNA1-201ENST00000368406 CHTF8P0CG12 524 aa8.12□□□□□ -1.11
EFNA1-201ENST00000368406 LINC00158P58513 81 aa8.12□□□□□ -1.11
EFNA1-201ENST00000368406 Q6ZSA8 131 aa8.12□□□□□ -1.11
EFNA1-201ENST00000368406 LINC00587B1AMM8 73 aa8.11□□□□□ -1.11
EFNA1-201ENST00000368406 TLX1NBP0CAT3 122 aa8.11□□□□□ -1.11
EFNA1-201ENST00000368406 PTTG1IPP53801 180 aa8.11□□□□□ -1.11
EFNA1-201ENST00000368406 Q6ZRP5 223 aa8.11□□□□□ -1.11
EFNA1-201ENST00000368406 PAM16Q9Y3D7 125 aa8.11□□□□□ -1.11
EFNA1-201ENST00000368406 DNAH8Q96JB1 4490 aa8.1□□□□□ -1.11
EFNA1-201ENST00000368406 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
EFNA1-201ENST00000368406 COX17Q14061 63 aa8.1□□□□□ -1.11
EFNA1-201ENST00000368406 SCGB1D4Q6XE38 83 aa8.1□□□□□ -1.11
EFNA1-201ENST00000368406 Q8N1X5 172 aa8.1□□□□□ -1.11
EFNA1-201ENST00000368406 FAM30AQ9NZY2 134 aa8.1□□□□□ -1.11
EFNA1-201ENST00000368406 SMIM13P0DJ93 91 aa8.09□□□□□ -1.11
EFNA1-201ENST00000368406 SPATA45Q537H7 98 aa8.09□□□□□ -1.11
EFNA1-201ENST00000368406 PYY3Q5JQD4 70 aa8.09□□□□□ -1.11
EFNA1-201ENST00000368406 TTTY13Q9BZ97 58 aa8.09□□□□□ -1.11
EFNA1-201ENST00000368406 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.11
EFNA1-201ENST00000368406 SPACA4Q8TDM5 124 aa8.08□□□□□ -1.12
EFNA1-201ENST00000368406 XAGE1AQ9HD64 81 aa8.08□□□□□ -1.12
EFNA1-201ENST00000368406 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
EFNA1-201ENST00000368406 S100A12P80511 92 aa8.07□□□□□ -1.12
EFNA1-201ENST00000368406 HAMPP81172 84 aa8.07□□□□□ -1.12
EFNA1-201ENST00000368406 PCP2Q8IVA1 136 aa8.07□□□□□ -1.12
EFNA1-201ENST00000368406 KRTAP17-1Q9BYP8 105 aa8.07□□□□□ -1.12
EFNA1-201ENST00000368406 FAT1Q14517 4588 aa8.06□□□□□ -1.12
EFNA1-201ENST00000368406 PCLOQ9Y6V0 5065 aa8.05□□□□□ -1.12
EFNA1-201ENST00000368406 PANO1I0J062 215 aa8.05□□□□□ -1.12
EFNA1-201ENST00000368406 FAM19A5Q7Z5A7 132 aaPredicted RBP8.05□□□□□ -1.12
EFNA1-201ENST00000368406 MIR7-3HGQ8N6C7 128 aa8.05□□□□□ -1.12
EFNA1-201ENST00000368406 MIEN1Q9BRT3 115 aa8.05□□□□□ -1.12
EFNA1-201ENST00000368406 TMEM238C9JI98 176 aa8.04□□□□□ -1.12
EFNA1-201ENST00000368406 SCXQ7RTU7 201 aa8.04□□□□□ -1.12
EFNA1-201ENST00000368406 DAND5Q8N907 189 aa8.04□□□□□ -1.12
EFNA1-201ENST00000368406 SND1-IT1Q9HBX3 110 aa8.04□□□□□ -1.12
EFNA1-201ENST00000368406 A0A087WYN8 130 aa8.03□□□□□ -1.12
EFNA1-201ENST00000368406 C9orf129Q5T035 196 aaKnown RBP8.03□□□□□ -1.12
EFNA1-201ENST00000368406 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
EFNA1-201ENST00000368406 LOC105371267A0A1B0GV96 52 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms