RNA–Protein interactions for RNA: ENST00000366792.3

PARP1-202, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3 BASIC

Gene PARP1, Length 553 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-202ENST00000366792 A0A1W2PNN7 141 aa13.17□□□□□ -0.3
PARP1-202ENST00000366792 J3QL48 77 aa13.17□□□□□ -0.3
PARP1-202ENST00000366792 TLX1NBP0CAT3 122 aa13.17□□□□□ -0.3
PARP1-202ENST00000366792 C9orf116Q5BN46 136 aaPredicted RBP13.17□□□□□ -0.3
PARP1-202ENST00000366792 DMBT1Q9UGM3 2413 aaPredicted RBP13.16□□□□□ -0.3
PARP1-202ENST00000366792 GAGE2EQ4V326 116 aa13.16□□□□□ -0.3
PARP1-202ENST00000366792 Q6ZRP5 223 aa13.16□□□□□ -0.3
PARP1-202ENST00000366792 GAGE2DQ9UEU5 116 aa13.16□□□□□ -0.3
PARP1-202ENST00000366792 IGLV5-45A0A087WSX0 123 aa13.15□□□□□ -0.3
PARP1-202ENST00000366792 SMIM1B2RUZ4 78 aa13.15□□□□□ -0.3
PARP1-202ENST00000366792 ATP5LO75964 103 aa13.14□□□□□ -0.31
PARP1-202ENST00000366792 PRR3P79522 188 aaKnown RBP13.14□□□□□ -0.31
PARP1-202ENST00000366792 PDZD11Q5EBL8 140 aa13.14□□□□□ -0.31
PARP1-202ENST00000366792 KRTAP29-1A8MX34 341 aaPredicted RBP13.13□□□□□ -0.31
PARP1-202ENST00000366792 SPINK8P0C7L1 97 aa13.13□□□□□ -0.31
PARP1-202ENST00000366792 CHCHD1Q96BP2 118 aaKnown RBP13.13□□□□□ -0.31
PARP1-202ENST00000366792 NDUFC2-KCTD14E9PQ53 114 aa13.12□□□□□ -0.31
PARP1-202ENST00000366792 TRGC2P03986 189 aa13.12□□□□□ -0.31
PARP1-202ENST00000366792 H3BRM9 83 aa13.11□□□□□ -0.31
PARP1-202ENST00000366792 IGLC3P0DOY3 106 aa13.11□□□□□ -0.31
PARP1-202ENST00000366792 CXCL5P42830 114 aa13.11□□□□□ -0.31
PARP1-202ENST00000366792 BAGE3Q86Y29 109 aa13.11□□□□□ -0.31
PARP1-202ENST00000366792 COX7B2Q8TF08 81 aa13.11□□□□□ -0.31
PARP1-202ENST00000366792 FAM168BA1KXE4 195 aa13.1□□□□□ -0.31
PARP1-202ENST00000366792 F8VRH5 84 aa13.1□□□□□ -0.31
PARP1-202ENST00000366792 PHF5AQ7RTV0 110 aaKnown RBP13.09□□□□□ -0.31
PARP1-202ENST00000366792 FAM19A5Q7Z5A7 132 aaPredicted RBP13.09□□□□□ -0.31
PARP1-202ENST00000366792 HSBP1O75506 76 aa13.07□□□□□ -0.32
PARP1-202ENST00000366792 OXTP01178 125 aa13.07□□□□□ -0.32
PARP1-202ENST00000366792 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
PARP1-202ENST00000366792 COLCA2A8K830 154 aa13.05□□□□□ -0.32
PARP1-202ENST00000366792 IFI27L1Q96BM0 104 aa13.05□□□□□ -0.32
PARP1-202ENST00000366792 C9orf129Q5T035 196 aaKnown RBP13.04□□□□□ -0.32
PARP1-202ENST00000366792 FAM19A2Q8N3H0 131 aa13.04□□□□□ -0.32
PARP1-202ENST00000366792 C11orf86A6NJI1 115 aa13.03□□□□□ -0.32
PARP1-202ENST00000366792 CHTOPQ9Y3Y2 248 aaKnown RBP13.03□□□□□ -0.32
PARP1-202ENST00000366792 M0QXV9 152 aa13.02□□□□□ -0.33
PARP1-202ENST00000366792 TMEM170BQ5T4T1 132 aa13.02□□□□□ -0.33
PARP1-202ENST00000366792 XAGE1AQ9HD64 81 aa13.02□□□□□ -0.33
PARP1-202ENST00000366792 PSORS1C2Q9UIG4 136 aa13.02□□□□□ -0.33
PARP1-202ENST00000366792 IGLV5-39A0A0G2JS06 123 aa13.01□□□□□ -0.33
PARP1-202ENST00000366792 SERF1AO75920 110 aa13.01□□□□□ -0.33
PARP1-202ENST00000366792 KRTAP7-1Q8IUC3 87 aa13.01□□□□□ -0.33
PARP1-202ENST00000366792 PKHD1L1Q86WI1 4243 aa13□□□□□ -0.33
PARP1-202ENST00000366792 TRAV12-1A0A0B4J245 112 aa12.99□□□□□ -0.33
PARP1-202ENST00000366792 SCO1O75880 301 aa12.99□□□□□ -0.33
PARP1-202ENST00000366792 LRP1Q07954 4544 aaKnown RBP12.98□□□□□ -0.33
PARP1-202ENST00000366792 LINC00310P59036 64 aa12.98□□□□□ -0.33
PARP1-202ENST00000366792 C1orf137Q5JT78 98 aa12.98□□□□□ -0.33
PARP1-202ENST00000366792 UBE2BP63146 152 aa12.97□□□□□ -0.33
PARP1-202ENST00000366792 SPINK6Q6UWN8 80 aa12.97□□□□□ -0.33
PARP1-202ENST00000366792 HERC1Q15751 4861 aa12.97□□□□□ -0.33
PARP1-202ENST00000366792 H0Y8G0 127 aa12.96□□□□□ -0.33
PARP1-202ENST00000366792 SERTAD4-AS1Q5TG53 156 aa12.96□□□□□ -0.33
PARP1-202ENST00000366792 LEPROTL1O95214 131 aa12.95□□□□□ -0.34
PARP1-202ENST00000366792 KRTAP11-1Q8IUC1 163 aa12.95□□□□□ -0.34
PARP1-202ENST00000366792 NUPR1O60356 82 aa12.93□□□□□ -0.34
PARP1-202ENST00000366792 SRSF9Q13242 221 aaKnown RBP eCLIP12.93□□□□□ -0.34
PARP1-202ENST00000366792 PFN2P35080 140 aa12.92□□□□□ -0.34
PARP1-202ENST00000366792 C22orf24Q9Y442 160 aa12.92□□□□□ -0.34
PARP1-202ENST00000366792 FAT3Q8TDW7 4589 aa12.92□□□□□ -0.34
PARP1-202ENST00000366792 TMEM223A0PJW6 202 aa12.91□□□□□ -0.34
PARP1-202ENST00000366792 FABP4P15090 132 aa12.91□□□□□ -0.34
PARP1-202ENST00000366792 ZNF625Q96I27 306 aaPredicted RBP12.91□□□□□ -0.34
PARP1-202ENST00000366792 HSPB8Q9UJY1 196 aa12.91□□□□□ -0.34
PARP1-202ENST00000366792 SFTA2Q6UW10 78 aa12.9□□□□□ -0.34
PARP1-202ENST00000366792 REG3GQ6UW15 175 aa12.9□□□□□ -0.34
PARP1-202ENST00000366792 ERG28Q9UKR5 140 aa12.9□□□□□ -0.34
PARP1-202ENST00000366792 IGLV7-43P04211 117 aa12.89□□□□□ -0.35
PARP1-202ENST00000366792 ODF1Q14990 250 aa12.89□□□□□ -0.35
PARP1-202ENST00000366792 LBHQ53QV2 105 aaPredicted RBP12.89□□□□□ -0.35
PARP1-202ENST00000366792 MT1HL1P0DM35 61 aa12.88□□□□□ -0.35
PARP1-202ENST00000366792 MRPL55Q7Z7F7 128 aaKnown RBP12.87□□□□□ -0.35
PARP1-202ENST00000366792 HIST1H2BKO60814 126 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 HIST1H2BJP06899 126 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 HIST1H2BOP23527 126 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 HIST1H2BBP33778 126 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 HIST1H2BDP58876 126 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 HIST1H2BCP62807 126 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 COX17Q14061 63 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 HIST2H2BEQ16778 126 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.86□□□□□ -0.35
PARP1-202ENST00000366792 HIST1H2BHQ93079 126 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 HIST1H2BNQ99877 126 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 HIST1H2BMQ99879 126 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 TP73-AS1Q9UF72 201 aa12.86□□□□□ -0.35
PARP1-202ENST00000366792 LINC01600Q96MT4 127 aa12.85□□□□□ -0.35
PARP1-202ENST00000366792 PLA2G2DQ9UNK4 145 aa12.85□□□□□ -0.35
PARP1-202ENST00000366792 NKAPP1Q8N9T2 125 aa12.84□□□□□ -0.35
PARP1-202ENST00000366792 SND1-IT1Q9HBX3 110 aa12.84□□□□□ -0.35
PARP1-202ENST00000366792 PLNP26678 52 aa12.83□□□□□ -0.36
PARP1-202ENST00000366792 DIRC1Q969H9 104 aa12.83□□□□□ -0.36
PARP1-202ENST00000366792 GAGE10A6NGK3 116 aa12.82□□□□□ -0.36
PARP1-202ENST00000366792 PMCHL2Q9BQD1 86 aa12.82□□□□□ -0.36
PARP1-202ENST00000366792 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
PARP1-202ENST00000366792 IGLV5-37A0A075B6J1 123 aa12.81□□□□□ -0.36
PARP1-202ENST00000366792 RPL37AP8A6NKH3 93 aa12.81□□□□□ -0.36
PARP1-202ENST00000366792 LINC00158P58513 81 aa12.81□□□□□ -0.36
PARP1-202ENST00000366792 LINC00167Q96N53 147 aa12.81□□□□□ -0.36
PARP1-202ENST00000366792 DPM2O94777 84 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms