RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 CDPF1Q6NVV7 123 aa11.08□□□□□ -0.64
LMNA-202ENST00000361308 UNQ6190/PRO20217Q6UXQ8 127 aa11.07□□□□□ -0.64
LMNA-202ENST00000361308 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
LMNA-202ENST00000361308 SMIM6P0DI80 62 aa11.06□□□□□ -0.64
LMNA-202ENST00000361308 S100A12P80511 92 aa11.06□□□□□ -0.64
LMNA-202ENST00000361308 SFTA2Q6UW10 78 aa11.06□□□□□ -0.64
LMNA-202ENST00000361308 NDUFA12Q9UI09 145 aa11.06□□□□□ -0.64
LMNA-202ENST00000361308 CNBPP62633 177 aaKnown RBP11.06□□□□□ -0.64
LMNA-202ENST00000361308 SPATA45Q537H7 98 aa11.06□□□□□ -0.64
LMNA-202ENST00000361308 Q6ZRU5 148 aa11.06□□□□□ -0.64
LMNA-202ENST00000361308 MYMXA0A1B0GTQ4 84 aa11.05□□□□□ -0.64
LMNA-202ENST00000361308 C10orf25Q5T742 122 aa11.05□□□□□ -0.64
LMNA-202ENST00000361308 CARD19Q96LW7 228 aa11.05□□□□□ -0.64
LMNA-202ENST00000361308 ZNF625Q96I27 306 aaPredicted RBP11.04□□□□□ -0.64
LMNA-202ENST00000361308 FRAS1Q86XX4 4008 aa11.04□□□□□ -0.64
LMNA-202ENST00000361308 TTTY13Q9BZ97 58 aa11.04□□□□□ -0.64
LMNA-202ENST00000361308 DNAH17Q9UFH2 4485 aa11.03□□□□□ -0.64
LMNA-202ENST00000361308 TRBV30A0A0K0K1B3 111 aa11.03□□□□□ -0.64
LMNA-202ENST00000361308 HERV-K104P63124 156 aa11.03□□□□□ -0.64
LMNA-202ENST00000361308 PCP2Q8IVA1 136 aa11.03□□□□□ -0.64
LMNA-202ENST00000361308 ZNF815PA8K554 130 aa11.02□□□□□ -0.65
LMNA-202ENST00000361308 PGPEP1Q9NXJ5 209 aa11.02□□□□□ -0.65
LMNA-202ENST00000361308 C6orf48Q9UBA6 75 aa11.02□□□□□ -0.65
LMNA-202ENST00000361308 IGLV5-52A0A0A0MRZ9 124 aa11.01□□□□□ -0.65
LMNA-202ENST00000361308 FUSP35637 526 aaKnown RBP eCLIP11.01□□□□□ -0.65
LMNA-202ENST00000361308 RNF151Q2KHN1 245 aa11.01□□□□□ -0.65
LMNA-202ENST00000361308 RYR3Q15413 4870 aa11□□□□□ -0.65
LMNA-202ENST00000361308 KRTAP10-2P60368 255 aa11□□□□□ -0.65
LMNA-202ENST00000361308 C9orf116Q5BN46 136 aaPredicted RBP11□□□□□ -0.65
LMNA-202ENST00000361308 C9orf163Q8N9P6 203 aa11□□□□□ -0.65
LMNA-202ENST00000361308 C14orf144Q96I85 54 aa11□□□□□ -0.65
LMNA-202ENST00000361308 COX8AP10176 69 aa10.99□□□□□ -0.65
LMNA-202ENST00000361308 MEIG1Q5JSS6 88 aa10.98□□□□□ -0.65
LMNA-202ENST00000361308 LINC00587B1AMM8 73 aa10.98□□□□□ -0.65
LMNA-202ENST00000361308 PFN2P35080 140 aa10.98□□□□□ -0.65
LMNA-202ENST00000361308 SCGB1D4Q6XE38 83 aa10.98□□□□□ -0.65
LMNA-202ENST00000361308 C12orf57Q99622 126 aa10.98□□□□□ -0.65
LMNA-202ENST00000361308 ERG28Q9UKR5 140 aa10.98□□□□□ -0.65
LMNA-202ENST00000361308 A0A0J9YXY3 114 aa10.97□□□□□ -0.65
LMNA-202ENST00000361308 BOD1L2Q8IYS8 172 aa10.97□□□□□ -0.65
LMNA-202ENST00000361308 FAT2Q9NYQ8 4349 aa10.96□□□□□ -0.65
LMNA-202ENST00000361308 A0A1B0GVY2 172 aa10.96□□□□□ -0.65
LMNA-202ENST00000361308 CIRBPQ14011 172 aaKnown RBP10.96□□□□□ -0.65
LMNA-202ENST00000361308 COX17Q14061 63 aa10.96□□□□□ -0.65
LMNA-202ENST00000361308 LINC01620Q4KN68 170 aa10.96□□□□□ -0.65
LMNA-202ENST00000361308 A0A0U1RRA0 63 aa10.95□□□□□ -0.66
LMNA-202ENST00000361308 LINC00158P58513 81 aa10.95□□□□□ -0.66
LMNA-202ENST00000361308 DLEU1O43261 78 aa10.95□□□□□ -0.66
LMNA-202ENST00000361308 SMIM13P0DJ93 91 aa10.95□□□□□ -0.66
LMNA-202ENST00000361308 LOC107984640A0A0U1RRK4 108 aa10.94□□□□□ -0.66
LMNA-202ENST00000361308 NDUFC2-KCTD14E9PQ53 114 aa10.94□□□□□ -0.66
LMNA-202ENST00000361308 SLC25A34Q6PIV7 304 aa10.94□□□□□ -0.66
LMNA-202ENST00000361308 LINC00518Q8N0U6 118 aa10.94□□□□□ -0.66
LMNA-202ENST00000361308 PKIGQ9Y2B9 76 aa10.94□□□□□ -0.66
LMNA-202ENST00000361308 TLX1NBP0CAT3 122 aa10.93□□□□□ -0.66
LMNA-202ENST00000361308 RPL18AQ02543 176 aaKnown RBP10.93□□□□□ -0.66
LMNA-202ENST00000361308 GCSHP23434 173 aa10.92□□□□□ -0.66
LMNA-202ENST00000361308 SDIM1Q6ZPB5 146 aa10.92□□□□□ -0.66
LMNA-202ENST00000361308 TP73-AS1Q9UF72 201 aa10.92□□□□□ -0.66
LMNA-202ENST00000361308 Q6ZRP5 223 aa10.92□□□□□ -0.66
LMNA-202ENST00000361308 GAGE2BQ13066 116 aa10.91□□□□□ -0.66
LMNA-202ENST00000361308 GAGE2EQ4V326 116 aa10.91□□□□□ -0.66
LMNA-202ENST00000361308 GAGE2DQ9UEU5 116 aa10.91□□□□□ -0.66
LMNA-202ENST00000361308 TIMM17BO60830 172 aa10.9□□□□□ -0.66
LMNA-202ENST00000361308 TMEM238C9JI98 176 aa10.89□□□□□ -0.67
LMNA-202ENST00000361308 ADAMTSL4-AS1Q5T5F5 129 aa10.89□□□□□ -0.67
LMNA-202ENST00000361308 MIR7-3HGQ8N6C7 128 aa10.89□□□□□ -0.67
LMNA-202ENST00000361308 PRO1933Q9H354 126 aa10.89□□□□□ -0.67
LMNA-202ENST00000361308 UQCR10Q9UDW1 63 aa10.89□□□□□ -0.67
LMNA-202ENST00000361308 C16orf90A8MZG2 172 aa10.89□□□□□ -0.67
LMNA-202ENST00000361308 DAND5Q8N907 189 aa10.89□□□□□ -0.67
LMNA-202ENST00000361308 IGKV2-24A0A0C4DH68 120 aa10.88□□□□□ -0.67
LMNA-202ENST00000361308 PTTG1IPP53801 180 aa10.88□□□□□ -0.67
LMNA-202ENST00000361308 LITAFQ99732 161 aa10.88□□□□□ -0.67
LMNA-202ENST00000361308 A0A096LNI7 61 aa10.87□□□□□ -0.67
LMNA-202ENST00000361308 XAGE1AQ9HD64 81 aa10.87□□□□□ -0.67
LMNA-202ENST00000361308 PKD1P98161 4303 aa10.87□□□□□ -0.67
LMNA-202ENST00000361308 SND1-IT1Q9HBX3 110 aa10.87□□□□□ -0.67
LMNA-202ENST00000361308 LINC00474Q9P2X8 69 aa10.87□□□□□ -0.67
LMNA-202ENST00000361308 DNAH11Q96DT5 4516 aa10.86□□□□□ -0.67
LMNA-202ENST00000361308 SRSF9Q13242 221 aaKnown RBP eCLIP10.86□□□□□ -0.67
LMNA-202ENST00000361308 DPH3Q96FX2 82 aa10.86□□□□□ -0.67
LMNA-202ENST00000361308 KRTAP10-1P60331 282 aa10.85□□□□□ -0.67
LMNA-202ENST00000361308 MIEN1Q9BRT3 115 aa10.85□□□□□ -0.67
LMNA-202ENST00000361308 HECTD4Q9Y4D8 3996 aa10.85□□□□□ -0.67
LMNA-202ENST00000361308 TSTD3H0UI37 97 aa10.84□□□□□ -0.67
LMNA-202ENST00000361308 CHTF8P0CG12 524 aa10.84□□□□□ -0.67
LMNA-202ENST00000361308 Q6ZVH6 145 aa10.84□□□□□ -0.67
LMNA-202ENST00000361308 HIGD1BQ9P298 99 aa10.84□□□□□ -0.67
LMNA-202ENST00000361308 NPC2P61916 151 aa10.84□□□□□ -0.67
LMNA-202ENST00000361308 C9orf129Q5T035 196 aaKnown RBP10.84□□□□□ -0.67
LMNA-202ENST00000361308 C2orf91Q6ZV80 131 aa10.84□□□□□ -0.67
LMNA-202ENST00000361308 SPANXDQ9BXN6 97 aa10.84□□□□□ -0.67
LMNA-202ENST00000361308 SPANXB1Q9NS25 103 aaPredicted RBP10.84□□□□□ -0.67
LMNA-202ENST00000361308 SPANXCQ9NY87 97 aa10.84□□□□□ -0.67
LMNA-202ENST00000361308 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.83□□□□□ -0.68
LMNA-202ENST00000361308 HIST1H4GQ99525 98 aa10.82□□□□□ -0.68
LMNA-202ENST00000361308 LINC00308Q8TCZ7 52 aa10.81□□□□□ -0.68
LMNA-202ENST00000361308 PANO1I0J062 215 aa10.81□□□□□ -0.68
LMNA-202ENST00000361308 HNRNPA3P51991 378 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms