RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 CRIP1P50238 77 aa12.71□□□□□ -0.38
CACNA1A-201ENST00000360228 CYSRT1A8MQ03 144 aa12.69□□□□□ -0.38
CACNA1A-201ENST00000360228 LINC00575Q6W349 94 aa12.69□□□□□ -0.38
CACNA1A-201ENST00000360228 IGLV5-52A0A0A0MRZ9 124 aa12.69□□□□□ -0.38
CACNA1A-201ENST00000360228 USP9YO00507 2555 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-201ENST00000360228 CRIP2P52943 208 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-201ENST00000360228 IGFL2Q6UWQ7 119 aa12.68□□□□□ -0.38
CACNA1A-201ENST00000360228 Q8IZM0 81 aa12.68□□□□□ -0.38
CACNA1A-201ENST00000360228 LTBP2Q14767 1821 aa12.68□□□□□ -0.38
CACNA1A-201ENST00000360228 C9orf116Q5BN46 136 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-201ENST00000360228 COL4A4P53420 1690 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-201ENST00000360228 ODF3BA8MYP8 253 aa12.67□□□□□ -0.38
CACNA1A-201ENST00000360228 ACYP2P14621 99 aa12.67□□□□□ -0.38
CACNA1A-201ENST00000360228 Q9BRP9 147 aa12.67□□□□□ -0.38
CACNA1A-201ENST00000360228 HCG22E2RYF7 251 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 A0A087WVE0 104 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 PRM2P04554 102 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 A0A087WYN8 130 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 IGKV2D-30A0A075B6S6 120 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 IGKV2-30P06310 120 aa12.66□□□□□ -0.38
CACNA1A-201ENST00000360228 PLA2G5P39877 138 aa12.65□□□□□ -0.38
CACNA1A-201ENST00000360228 PRR3P79522 188 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-201ENST00000360228 SHISA2Q6UWI4 295 aa12.65□□□□□ -0.38
CACNA1A-201ENST00000360228 LINC01556Q5JQF7 62 aa12.65□□□□□ -0.38
CACNA1A-201ENST00000360228 ATP11AUNQ6ZP68 121 aa12.64□□□□□ -0.39
CACNA1A-201ENST00000360228 Q9UF83 564 aa12.64□□□□□ -0.39
CACNA1A-201ENST00000360228 MSMPQ1L6U9 139 aa12.64□□□□□ -0.39
CACNA1A-201ENST00000360228 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
CACNA1A-201ENST00000360228 ANKRD11Q6UB99 2663 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-201ENST00000360228 IGLV2-11P01706 119 aa12.63□□□□□ -0.39
CACNA1A-201ENST00000360228 BCE1O60756 84 aa12.63□□□□□ -0.39
CACNA1A-201ENST00000360228 C11orf1Q9H5F2 150 aa12.62□□□□□ -0.39
CACNA1A-201ENST00000360228 PRRC2CQ9Y520 2896 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-201ENST00000360228 C6orf223Q8N319 242 aa12.62□□□□□ -0.39
CACNA1A-201ENST00000360228 C1orf64Q8NEQ6 169 aa12.61□□□□□ -0.39
CACNA1A-201ENST00000360228 FSHBP01225 129 aa12.6□□□□□ -0.39
CACNA1A-201ENST00000360228 CNFNQ9BYD5 112 aa12.6□□□□□ -0.39
CACNA1A-201ENST00000360228 C4orf26Q17RF5 130 aa12.6□□□□□ -0.39
CACNA1A-201ENST00000360228 C10orf99Q6UWK7 81 aa12.59□□□□□ -0.39
CACNA1A-201ENST00000360228 UNQ6190/PRO20217Q6UXQ8 127 aa12.59□□□□□ -0.39
CACNA1A-201ENST00000360228 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
CACNA1A-201ENST00000360228 CHD8Q9HCK8 2581 aa12.58□□□□□ -0.4
CACNA1A-201ENST00000360228 TP53AIP1Q9HCN2 124 aa12.58□□□□□ -0.4
CACNA1A-201ENST00000360228 C2orf48Q96LS8 159 aa12.58□□□□□ -0.4
CACNA1A-201ENST00000360228 Q6ZTC4 211 aa12.57□□□□□ -0.4
CACNA1A-201ENST00000360228 LINC00337Q8N6G1 96 aa12.56□□□□□ -0.4
CACNA1A-201ENST00000360228 MDFIQ99750 246 aa12.56□□□□□ -0.4
CACNA1A-201ENST00000360228 A0A087WSZ3 146 aa12.56□□□□□ -0.4
CACNA1A-201ENST00000360228 LMO4P61968 165 aa12.56□□□□□ -0.4
CACNA1A-201ENST00000360228 LINC00574Q9H8X3 128 aa12.56□□□□□ -0.4
CACNA1A-201ENST00000360228 C18orf65Q6ZTR6 163 aa12.55□□□□□ -0.4
CACNA1A-201ENST00000360228 SSBP3-AS1Q7Z2R9 100 aa12.55□□□□□ -0.4
CACNA1A-201ENST00000360228 P0C879 139 aa12.55□□□□□ -0.4
CACNA1A-201ENST00000360228 Q6ZSV7 163 aa12.55□□□□□ -0.4
CACNA1A-201ENST00000360228 COX6A2Q02221 97 aa12.55□□□□□ -0.4
CACNA1A-201ENST00000360228 A0A1B0GW54 56 aa12.54□□□□□ -0.4
CACNA1A-201ENST00000360228 MRGPRG-AS1Q2M3A8 158 aa12.54□□□□□ -0.4
CACNA1A-201ENST00000360228 ZNF702PQ9H963 129 aa12.54□□□□□ -0.4
CACNA1A-201ENST00000360228 IGLV8-61A0A075B6I0 122 aa12.53□□□□□ -0.4
CACNA1A-201ENST00000360228 PRR9Q5T870 116 aa12.52□□□□□ -0.41
CACNA1A-201ENST00000360228 LY6G6DO95868 133 aa12.52□□□□□ -0.41
CACNA1A-201ENST00000360228 FSTL3O95633 263 aa12.52□□□□□ -0.41
CACNA1A-201ENST00000360228 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
CACNA1A-201ENST00000360228 EGFEM1PQ0D2K5 195 aa12.51□□□□□ -0.41
CACNA1A-201ENST00000360228 C6orf48Q9UBA6 75 aa12.51□□□□□ -0.41
CACNA1A-201ENST00000360228 FBXL19-AS1Q494R0 122 aa12.5□□□□□ -0.41
CACNA1A-201ENST00000360228 KLLNB2CW77 178 aa12.49□□□□□ -0.41
CACNA1A-201ENST00000360228 GAS8-AS1O95177 125 aa12.48□□□□□ -0.41
CACNA1A-201ENST00000360228 IGF2RP11717 2491 aa12.48□□□□□ -0.41
CACNA1A-201ENST00000360228 A8MTW9 85 aa12.48□□□□□ -0.41
CACNA1A-201ENST00000360228 PSMG3-AS1Q96PY0 264 aa12.48□□□□□ -0.41
CACNA1A-201ENST00000360228 F8WDY8 70 aa12.47□□□□□ -0.41
CACNA1A-201ENST00000360228 BPTFQ12830 3046 aa12.46□□□□□ -0.41
CACNA1A-201ENST00000360228 CRIPTQ9P021 101 aa12.46□□□□□ -0.41
CACNA1A-201ENST00000360228 C19orf84I3L1E1 186 aa12.46□□□□□ -0.41
CACNA1A-201ENST00000360228 C1orf229Q6ZS94 237 aaPredicted RBP12.46□□□□□ -0.41
CACNA1A-201ENST00000360228 POLR2KP53803 58 aaKnown RBP12.46□□□□□ -0.42
CACNA1A-201ENST00000360228 CD164Q04900 197 aa12.45□□□□□ -0.42
CACNA1A-201ENST00000360228 Q8NA96 180 aa12.45□□□□□ -0.42
CACNA1A-201ENST00000360228 FASNP49327 2511 aaKnown RBP12.45□□□□□ -0.42
CACNA1A-201ENST00000360228 LINC00242Q5T6M2 205 aa12.44□□□□□ -0.42
CACNA1A-201ENST00000360228 SMIM1B2RUZ4 78 aa12.44□□□□□ -0.42
CACNA1A-201ENST00000360228 IGIPA6NJ69 53 aa12.43□□□□□ -0.42
CACNA1A-201ENST00000360228 BRWD1-AS2P59051 145 aa12.42□□□□□ -0.42
CACNA1A-201ENST00000360228 SMIM29Q86T20 159 aa12.42□□□□□ -0.42
CACNA1A-201ENST00000360228 ADAMTSL4-AS1Q5T5F5 129 aa12.42□□□□□ -0.42
CACNA1A-201ENST00000360228 ZNF295-AS1Q8N0V1 137 aa12.41□□□□□ -0.42
CACNA1A-201ENST00000360228 LINC01006Q8NI28 216 aa12.4□□□□□ -0.42
CACNA1A-201ENST00000360228 C11orf21Q9P2W6 132 aa12.4□□□□□ -0.42
CACNA1A-201ENST00000360228 H3BPC8 53 aa12.4□□□□□ -0.42
CACNA1A-201ENST00000360228 SPACA4Q8TDM5 124 aa12.4□□□□□ -0.42
CACNA1A-201ENST00000360228 LINC00846Q9NV44 126 aa12.39□□□□□ -0.43
CACNA1A-201ENST00000360228 IGLV4-60A0A075B6I1 120 aa12.38□□□□□ -0.43
CACNA1A-201ENST00000360228 BRI3O95415 125 aa12.38□□□□□ -0.43
CACNA1A-201ENST00000360228 LUZP6Q538Z0 58 aa12.38□□□□□ -0.43
CACNA1A-201ENST00000360228 CYP4F30PQ9H0H9 118 aa12.38□□□□□ -0.43
CACNA1A-201ENST00000360228 COL4A3Q01955 1670 aa12.37□□□□□ -0.43
CACNA1A-201ENST00000360228 EPG5Q9HCE0 2579 aa12.37□□□□□ -0.43
CACNA1A-201ENST00000360228 WISP2O76076 250 aa12.36□□□□□ -0.43
CACNA1A-201ENST00000360228 C1orf134Q5TEV5 83 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms