RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 C11orf72Q8NBR9 251 aa10.59□□□□□ -0.71
UBAP1-202ENST00000359544 NCR3O14931 201 aa10.59□□□□□ -0.71
UBAP1-202ENST00000359544 PRM2P04554 102 aa10.59□□□□□ -0.71
UBAP1-202ENST00000359544 CDC42SE2Q9NRR3 84 aa10.59□□□□□ -0.71
UBAP1-202ENST00000359544 CCKP06307 115 aa10.58□□□□□ -0.72
UBAP1-202ENST00000359544 DEFB131AP59861 70 aa10.58□□□□□ -0.72
UBAP1-202ENST00000359544 HRCT1Q6UXD1 115 aa10.58□□□□□ -0.72
UBAP1-202ENST00000359544 COX7B2Q8TF08 81 aa10.58□□□□□ -0.72
UBAP1-202ENST00000359544 ESM1Q9NQ30 184 aa10.58□□□□□ -0.72
UBAP1-202ENST00000359544 ORMDL1Q9P0S3 153 aa10.58□□□□□ -0.72
UBAP1-202ENST00000359544 RBMY1BA6NDE4 496 aaKnown RBP10.57□□□□□ -0.72
UBAP1-202ENST00000359544 RBMY1EA6NEQ0 496 aaKnown RBP10.57□□□□□ -0.72
UBAP1-202ENST00000359544 RBMY1DP0C7P1 496 aaKnown RBP10.57□□□□□ -0.72
UBAP1-202ENST00000359544 RPL36AP83881 106 aaKnown RBP10.57□□□□□ -0.72
UBAP1-202ENST00000359544 MRAPQ8TCY5 172 aa10.57□□□□□ -0.72
UBAP1-202ENST00000359544 RPL36ALQ969Q0 106 aaKnown RBP10.57□□□□□ -0.72
UBAP1-202ENST00000359544 GHRHP01286 108 aa10.57□□□□□ -0.72
UBAP1-202ENST00000359544 FHL2Q14192 279 aa10.57□□□□□ -0.72
UBAP1-202ENST00000359544 DEFB112Q30KQ8 113 aa10.57□□□□□ -0.72
UBAP1-202ENST00000359544 TENM1Q9UKZ4 2725 aa10.56□□□□□ -0.72
UBAP1-202ENST00000359544 LINC00158P58513 81 aa10.56□□□□□ -0.72
UBAP1-202ENST00000359544 KRTAP24-1Q3LI83 254 aa10.56□□□□□ -0.72
UBAP1-202ENST00000359544 TRBV10-1A0A0K0K1A3 114 aa10.55□□□□□ -0.72
UBAP1-202ENST00000359544 JMJD7-PLA2G4BH0Y9G9 81 aa10.55□□□□□ -0.72
UBAP1-202ENST00000359544 STAB1Q9NY15 2570 aa10.54□□□□□ -0.72
UBAP1-202ENST00000359544 INSP01308 110 aa10.54□□□□□ -0.72
UBAP1-202ENST00000359544 CCL18P55774 89 aa10.54□□□□□ -0.72
UBAP1-202ENST00000359544 UBE2L6O14933 153 aa10.54□□□□□ -0.72
UBAP1-202ENST00000359544 K7EQD1 137 aa10.53□□□□□ -0.72
UBAP1-202ENST00000359544 NTM-AS1Q6ZSK4 140 aa10.53□□□□□ -0.72
UBAP1-202ENST00000359544 TMEM243Q9BU79 118 aa10.53□□□□□ -0.72
UBAP1-202ENST00000359544 TRBV10-3A0A0K0K1G6 114 aa10.53□□□□□ -0.72
UBAP1-202ENST00000359544 IBA57-AS1B1ANH7 110 aa10.53□□□□□ -0.72
UBAP1-202ENST00000359544 DNAJC9-AS1A6NH13 148 aa10.52□□□□□ -0.72
UBAP1-202ENST00000359544 C10orf99Q6UWK7 81 aa10.52□□□□□ -0.72
UBAP1-202ENST00000359544 TOMM7Q9P0U1 55 aa10.52□□□□□ -0.72
UBAP1-202ENST00000359544 FAM236DA0A1B0GTK5 79 aa10.52□□□□□ -0.73
UBAP1-202ENST00000359544 FAM236CP0DP71 79 aa10.52□□□□□ -0.73
UBAP1-202ENST00000359544 SLPIP03973 132 aa10.51□□□□□ -0.73
UBAP1-202ENST00000359544 HILS1P60008 231 aa10.51□□□□□ -0.73
UBAP1-202ENST00000359544 PAX4O43316 350 aa10.51□□□□□ -0.73
UBAP1-202ENST00000359544 IGHV4-59P01825 116 aa10.51□□□□□ -0.73
UBAP1-202ENST00000359544 SS18Q15532 418 aa10.51□□□□□ -0.73
UBAP1-202ENST00000359544 LYPD5Q6UWN5 251 aa10.51□□□□□ -0.73
UBAP1-202ENST00000359544 TRAV23DV6A0A075B6W5 121 aa10.5□□□□□ -0.73
UBAP1-202ENST00000359544 LINC00167Q96N53 147 aa10.5□□□□□ -0.73
UBAP1-202ENST00000359544 BCE1O60756 84 aa10.49□□□□□ -0.73
UBAP1-202ENST00000359544 TRBV6-4A0A1B0GX49 114 aa10.49□□□□□ -0.73
UBAP1-202ENST00000359544 C20orf197Q8N268 126 aa10.49□□□□□ -0.73
UBAP1-202ENST00000359544 SERP1Q9Y6X1 66 aa10.49□□□□□ -0.73
UBAP1-202ENST00000359544 TRGV1A0A0A0MS02 117 aa10.48□□□□□ -0.73
UBAP1-202ENST00000359544 UBL5Q9BZL1 73 aa10.48□□□□□ -0.73
UBAP1-202ENST00000359544 TMEM256-PLSCR3K7ERE1 68 aa10.48□□□□□ -0.73
UBAP1-202ENST00000359544 XCL1P47992 114 aa10.48□□□□□ -0.73
UBAP1-202ENST00000359544 ENHOQ6UWT2 76 aa10.48□□□□□ -0.73
UBAP1-202ENST00000359544 XCL2Q9UBD3 114 aa10.48□□□□□ -0.73
UBAP1-202ENST00000359544 PFN2P35080 140 aa10.47□□□□□ -0.73
UBAP1-202ENST00000359544 Q6YL49 198 aa10.47□□□□□ -0.73
UBAP1-202ENST00000359544 UBE2E2Q96LR5 201 aa10.47□□□□□ -0.73
UBAP1-202ENST00000359544 EPM2AB3EWF7 344 aa10.47□□□□□ -0.73
UBAP1-202ENST00000359544 MAP6D1Q9H9H5 199 aa10.47□□□□□ -0.73
UBAP1-202ENST00000359544 FAM19A1Q7Z5A9 133 aa10.46□□□□□ -0.73
UBAP1-202ENST00000359544 WFDC9Q8NEX5 89 aa10.46□□□□□ -0.73
UBAP1-202ENST00000359544 IL17DQ8TAD2 202 aa10.46□□□□□ -0.73
UBAP1-202ENST00000359544 KRTAP21-3Q3LHN1 58 aa10.45□□□□□ -0.74
UBAP1-202ENST00000359544 TRAV7A0A075B6U4 112 aa10.44□□□□□ -0.74
UBAP1-202ENST00000359544 Q8N814 137 aa10.44□□□□□ -0.74
UBAP1-202ENST00000359544 PRO0628Q9UI54 55 aa10.44□□□□□ -0.74
UBAP1-202ENST00000359544 IGHV3OR16-9A0A0B4J2B5 98 aa10.43□□□□□ -0.74
UBAP1-202ENST00000359544 TMEM86BQ8N661 226 aa10.43□□□□□ -0.74
UBAP1-202ENST00000359544 A0A087WZ39 114 aa10.42□□□□□ -0.74
UBAP1-202ENST00000359544 SLURP1P55000 103 aa10.42□□□□□ -0.74
UBAP1-202ENST00000359544 H7BZZ5 65 aa10.42□□□□□ -0.74
UBAP1-202ENST00000359544 RNASE1P07998 156 aaKnown RBP10.42□□□□□ -0.74
UBAP1-202ENST00000359544 SORL1Q92673 2214 aa10.41□□□□□ -0.74
UBAP1-202ENST00000359544 IGKV3OR2-268A0A0C4DH90 116 aa10.41□□□□□ -0.74
UBAP1-202ENST00000359544 DYNLRB2Q8TF09 96 aa10.41□□□□□ -0.74
UBAP1-202ENST00000359544 ANK2Q01484 3957 aa10.4□□□□□ -0.74
UBAP1-202ENST00000359544 Q6ZTI0 123 aa10.4□□□□□ -0.74
UBAP1-202ENST00000359544 KLKP1Q107X0 134 aa10.4□□□□□ -0.75
UBAP1-202ENST00000359544 A0A1W2PRX2 142 aa10.39□□□□□ -0.75
UBAP1-202ENST00000359544 C1orf158Q8N1D5 194 aa10.39□□□□□ -0.75
UBAP1-202ENST00000359544 TRRAPQ9Y4A5 3859 aa10.38□□□□□ -0.75
UBAP1-202ENST00000359544 C6orf226Q5I0X4 101 aa10.38□□□□□ -0.75
UBAP1-202ENST00000359544 C11orf44Q8N8P7 122 aa10.38□□□□□ -0.75
UBAP1-202ENST00000359544 SMIM26A0A096LP01 95 aa10.37□□□□□ -0.75
UBAP1-202ENST00000359544 DEFB136Q30KP8 78 aa10.37□□□□□ -0.75
UBAP1-202ENST00000359544 STHQ8IWL8 128 aa10.37□□□□□ -0.75
UBAP1-202ENST00000359544 IGLV4-60A0A075B6I1 120 aa10.36□□□□□ -0.75
UBAP1-202ENST00000359544 LINC00336Q6ZUF6 198 aa10.36□□□□□ -0.75
UBAP1-202ENST00000359544 LINC00482Q8N8I6 264 aa10.36□□□□□ -0.75
UBAP1-202ENST00000359544 NANOS2P60321 138 aaKnown RBP10.35□□□□□ -0.75
UBAP1-202ENST00000359544 Q6ZQT0 140 aa10.35□□□□□ -0.75
UBAP1-202ENST00000359544 ZNF702PQ9H963 129 aa10.35□□□□□ -0.75
UBAP1-202ENST00000359544 PKD1L1Q8TDX9 2849 aa10.34□□□□□ -0.75
UBAP1-202ENST00000359544 LOC110117498A0A087WWA1 95 aa10.34□□□□□ -0.75
UBAP1-202ENST00000359544 RBM3P98179 157 aaKnown RBP10.34□□□□□ -0.75
UBAP1-202ENST00000359544 DEFB114Q30KQ6 69 aa10.34□□□□□ -0.75
UBAP1-202ENST00000359544 LINC01006Q8NI28 216 aa10.34□□□□□ -0.75
UBAP1-202ENST00000359544 KRTAP10-3P60369 221 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms