RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PROK1P58294 105 aa6.43□□□□□ -1.38
COL6A6-201ENST00000358511 COL4A2P08572 1712 aa6.43□□□□□ -1.38
COL6A6-201ENST00000358511 TMEM254Q8TBM7 123 aa6.42□□□□□ -1.38
COL6A6-201ENST00000358511 CXCL6P80162 114 aa6.42□□□□□ -1.38
COL6A6-201ENST00000358511 CIRBP-AS1Q8TBR5 109 aa6.42□□□□□ -1.38
COL6A6-201ENST00000358511 M0R378 163 aa6.42□□□□□ -1.38
COL6A6-201ENST00000358511 ESRGQ1W209 222 aa6.42□□□□□ -1.38
COL6A6-201ENST00000358511 CELA1Q9UNI1 258 aa6.42□□□□□ -1.38
COL6A6-201ENST00000358511 ZNF706Q9Y5V0 76 aaPredicted RBP6.41□□□□□ -1.38
COL6A6-201ENST00000358511 FBXL19-AS1Q494R0 122 aa6.41□□□□□ -1.38
COL6A6-201ENST00000358511 SMIM1B2RUZ4 78 aa6.41□□□□□ -1.38
COL6A6-201ENST00000358511 PRO0461Q9UI25 63 aa6.41□□□□□ -1.38
COL6A6-201ENST00000358511 HILS1P60008 231 aa6.41□□□□□ -1.38
COL6A6-201ENST00000358511 AMELXQ99217 191 aa6.41□□□□□ -1.38
COL6A6-201ENST00000358511 CDC42SE2Q9NRR3 84 aa6.4□□□□□ -1.38
COL6A6-201ENST00000358511 IGKV2-28A0A075B6P5 120 aa6.4□□□□□ -1.38
COL6A6-201ENST00000358511 IGKV2D-28P01615 120 aa6.4□□□□□ -1.38
COL6A6-201ENST00000358511 MRGPRG-AS1Q2M3A8 158 aa6.4□□□□□ -1.38
COL6A6-201ENST00000358511 LINC00242Q5T6M2 205 aa6.4□□□□□ -1.38
COL6A6-201ENST00000358511 TRBV10-3A0A0K0K1G6 114 aa6.4□□□□□ -1.39
COL6A6-201ENST00000358511 C4orf26Q17RF5 130 aa6.4□□□□□ -1.39
COL6A6-201ENST00000358511 Q6ZSV7 163 aa6.4□□□□□ -1.39
COL6A6-201ENST00000358511 DEFB114Q30KQ6 69 aa6.39□□□□□ -1.39
COL6A6-201ENST00000358511 FLG2Q5D862 2391 aaPredicted RBP6.39□□□□□ -1.39
COL6A6-201ENST00000358511 LINC00846Q9NV44 126 aa6.39□□□□□ -1.39
COL6A6-201ENST00000358511 NUPR2A6NF83 97 aa6.39□□□□□ -1.39
COL6A6-201ENST00000358511 TNFRSF13BO14836 293 aaPredicted RBP6.39□□□□□ -1.39
COL6A6-201ENST00000358511 LINC01547P58512 204 aaPredicted RBP6.38□□□□□ -1.39
COL6A6-201ENST00000358511 PRLHP81277 87 aa6.38□□□□□ -1.39
COL6A6-201ENST00000358511 LINC00959A0A1B0GUT2 108 aa6.38□□□□□ -1.39
COL6A6-201ENST00000358511 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
COL6A6-201ENST00000358511 Q8N6K4 173 aa6.38□□□□□ -1.39
COL6A6-201ENST00000358511 LIMD2Q9BT23 127 aa6.38□□□□□ -1.39
COL6A6-201ENST00000358511 ACYP2P14621 99 aa6.38□□□□□ -1.39
COL6A6-201ENST00000358511 ADORA2A-AS1P86434 159 aa6.37□□□□□ -1.39
COL6A6-201ENST00000358511 SMCPP49901 116 aaPredicted RBP6.37□□□□□ -1.39
COL6A6-201ENST00000358511 ZNF843Q8N446 348 aa6.37□□□□□ -1.39
COL6A6-201ENST00000358511 DEFB113Q30KQ7 82 aa6.37□□□□□ -1.39
COL6A6-201ENST00000358511 LMO4P61968 165 aa6.36□□□□□ -1.39
COL6A6-201ENST00000358511 COX6A2Q02221 97 aa6.36□□□□□ -1.39
COL6A6-201ENST00000358511 SYCNQ0VAF6 134 aa6.36□□□□□ -1.39
COL6A6-201ENST00000358511 LINC00208Q96KT6 92 aa6.36□□□□□ -1.39
COL6A6-201ENST00000358511 TRAV10A0A0B4J240 114 aa6.35□□□□□ -1.39
COL6A6-201ENST00000358511 CHCHD7Q9BUK0 85 aa6.35□□□□□ -1.39
COL6A6-201ENST00000358511 DEFB131BA0A096LNP1 70 aa6.35□□□□□ -1.39
COL6A6-201ENST00000358511 PCNTO95613 3336 aa6.34□□□□□ -1.39
COL6A6-201ENST00000358511 A0A1W2PNU3 283 aaPredicted RBP6.34□□□□□ -1.39
COL6A6-201ENST00000358511 C1orf137Q5JT78 98 aa6.34□□□□□ -1.39
COL6A6-201ENST00000358511 ZNF580Q9UK33 172 aa6.34□□□□□ -1.39
COL6A6-201ENST00000358511 AKAP13Q12802 2813 aa6.34□□□□□ -1.39
COL6A6-201ENST00000358511 BCE1O60756 84 aa6.34□□□□□ -1.39
COL6A6-201ENST00000358511 LINC00575Q6W349 94 aa6.34□□□□□ -1.4
COL6A6-201ENST00000358511 BEAN1Q3B7T3 259 aa6.33□□□□□ -1.4
COL6A6-201ENST00000358511 DNAJC9-AS1A6NH13 148 aa6.33□□□□□ -1.4
COL6A6-201ENST00000358511 SBSPONQ8IVN8 264 aa6.33□□□□□ -1.4
COL6A6-201ENST00000358511 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
COL6A6-201ENST00000358511 FHL2Q14192 279 aa6.32□□□□□ -1.4
COL6A6-201ENST00000358511 C10orf25Q5T742 122 aa6.32□□□□□ -1.4
COL6A6-201ENST00000358511 LELP1Q5T871 98 aa6.32□□□□□ -1.4
COL6A6-201ENST00000358511 PLAC8L1A1L4L8 177 aa6.32□□□□□ -1.4
COL6A6-201ENST00000358511 CYSRT1A8MQ03 144 aa6.32□□□□□ -1.4
COL6A6-201ENST00000358511 LOC100131303A0A0U1RQF7 123 aa6.31□□□□□ -1.4
COL6A6-201ENST00000358511 HCG22E2RYF7 251 aa6.31□□□□□ -1.4
COL6A6-201ENST00000358511 IGLV1-40P01703 118 aa6.31□□□□□ -1.4
COL6A6-201ENST00000358511 PRR3P79522 188 aaKnown RBP6.31□□□□□ -1.4
COL6A6-201ENST00000358511 Q6YL49 198 aa6.31□□□□□ -1.4
COL6A6-201ENST00000358511 H0Y9P7 68 aa6.31□□□□□ -1.4
COL6A6-201ENST00000358511 BBC3Q96PG8 261 aaPredicted RBP6.31□□□□□ -1.4
COL6A6-201ENST00000358511 WISP2O76076 250 aa6.3□□□□□ -1.4
COL6A6-201ENST00000358511 RPL37AP8A6NKH3 93 aa6.3□□□□□ -1.4
COL6A6-201ENST00000358511 OXLD1Q5BKU9 147 aa6.3□□□□□ -1.4
COL6A6-201ENST00000358511 IGHV6-1A0A0B4J1U7 121 aa6.29□□□□□ -1.4
COL6A6-201ENST00000358511 C9orf116Q5BN46 136 aaPredicted RBP6.29□□□□□ -1.4
COL6A6-201ENST00000358511 Q8NA96 180 aa6.29□□□□□ -1.4
COL6A6-201ENST00000358511 FASNP49327 2511 aaKnown RBP6.29□□□□□ -1.4
COL6A6-201ENST00000358511 PRM2P04554 102 aa6.28□□□□□ -1.4
COL6A6-201ENST00000358511 CR1P17927 2039 aa6.28□□□□□ -1.4
COL6A6-201ENST00000358511 EGFEM1PQ0D2K5 195 aa6.28□□□□□ -1.4
COL6A6-201ENST00000358511 IGLV5-52A0A0A0MRZ9 124 aa6.28□□□□□ -1.4
COL6A6-201ENST00000358511 CENPEQ02224 2701 aa6.28□□□□□ -1.4
COL6A6-201ENST00000358511 IGLV5-39A0A0G2JS06 123 aa6.28□□□□□ -1.4
COL6A6-201ENST00000358511 SPAG11AQ6PDA7 123 aa6.28□□□□□ -1.4
COL6A6-201ENST00000358511 UNQ6190/PRO20217Q6UXQ8 127 aa6.27□□□□□ -1.41
COL6A6-201ENST00000358511 COX6B2Q6YFQ2 88 aa6.27□□□□□ -1.41
COL6A6-201ENST00000358511 A0A0C4DFX4 3053 aa6.27□□□□□ -1.41
COL6A6-201ENST00000358511 C11orf71Q6IPW1 123 aa6.27□□□□□ -1.41
COL6A6-201ENST00000358511 C7orf65Q6ZTY9 151 aa6.27□□□□□ -1.41
COL6A6-201ENST00000358511 A0A1B0GUV1 79 aa6.26□□□□□ -1.41
COL6A6-201ENST00000358511 LINC01561Q8N1V8 128 aa6.26□□□□□ -1.41
COL6A6-201ENST00000358511 C10orf99Q6UWK7 81 aa6.26□□□□□ -1.41
COL6A6-201ENST00000358511 REG3GQ6UW15 175 aa6.26□□□□□ -1.41
COL6A6-201ENST00000358511 LINC00474Q9P2X8 69 aa6.25□□□□□ -1.41
COL6A6-201ENST00000358511 IGKV2D-30A0A075B6S6 120 aa6.25□□□□□ -1.41
COL6A6-201ENST00000358511 IGKV2-30P06310 120 aa6.25□□□□□ -1.41
COL6A6-201ENST00000358511 KPRPQ5T749 579 aaPredicted RBP6.25□□□□□ -1.41
COL6A6-201ENST00000358511 C8orf87E5RJ46 101 aa6.25□□□□□ -1.41
COL6A6-201ENST00000358511 J3QL48 77 aa6.25□□□□□ -1.41
COL6A6-201ENST00000358511 LOC110117498A0A087WWA1 95 aa6.24□□□□□ -1.41
COL6A6-201ENST00000358511 A0A1B0GW54 56 aa6.24□□□□□ -1.41
COL6A6-201ENST00000358511 IGLV4-60A0A075B6I1 120 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms