RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 LINC00694P0DN24 101 aa4.1□□□□□ -1.75
BRCA1-203ENST00000357654 CHD9Q3L8U1 2897 aa4.1□□□□□ -1.75
BRCA1-203ENST00000357654 CUL9Q8IWT3 2517 aa4.1□□□□□ -1.75
BRCA1-203ENST00000357654 EXPH5Q8NEV8 1989 aa4.1□□□□□ -1.75
BRCA1-203ENST00000357654 CDSNQ15517 529 aa4.1□□□□□ -1.75
BRCA1-203ENST00000357654 C11orf71Q6IPW1 123 aa4.1□□□□□ -1.75
BRCA1-203ENST00000357654 TRAV7A0A075B6U4 112 aa4.1□□□□□ -1.75
BRCA1-203ENST00000357654 ARID2Q68CP9 1835 aa4.1□□□□□ -1.75
BRCA1-203ENST00000357654 IGLV5-39A0A0G2JS06 123 aa4.09□□□□□ -1.75
BRCA1-203ENST00000357654 CCDC179H3BU77 68 aa4.09□□□□□ -1.75
BRCA1-203ENST00000357654 EPM2AB3EWF7 344 aa4.09□□□□□ -1.75
BRCA1-203ENST00000357654 Q8N2B8 174 aa4.09□□□□□ -1.75
BRCA1-203ENST00000357654 ODF3L2Q3SX64 289 aa4.09□□□□□ -1.75
BRCA1-203ENST00000357654 OBSCN-AS1Q96MR7 158 aa4.09□□□□□ -1.75
BRCA1-203ENST00000357654 Q8N3U1 123 aa4.09□□□□□ -1.76
BRCA1-203ENST00000357654 CNOT1A5YKK6 2376 aaKnown RBP4.08□□□□□ -1.76
BRCA1-203ENST00000357654 FREM1Q5H8C1 2179 aa4.08□□□□□ -1.76
BRCA1-203ENST00000357654 NBDYA0A0U1RRE5 68 aa4.08□□□□□ -1.76
BRCA1-203ENST00000357654 DSCR10P59022 87 aa4.08□□□□□ -1.76
BRCA1-203ENST00000357654 IGLV1-51P01701 117 aa4.08□□□□□ -1.76
BRCA1-203ENST00000357654 GVINP1Q7Z2Y8 2422 aa4.08□□□□□ -1.76
BRCA1-203ENST00000357654 VWA8A3KMH1 1905 aa4.08□□□□□ -1.76
BRCA1-203ENST00000357654 KRTAP24-1Q3LI83 254 aa4.07□□□□□ -1.76
BRCA1-203ENST00000357654 LINC00304Q8N9R0 145 aa4.07□□□□□ -1.76
BRCA1-203ENST00000357654 ROS1P08922 2347 aa4.07□□□□□ -1.76
BRCA1-203ENST00000357654 PTPRQQ9UMZ3 2332 aa4.07□□□□□ -1.76
BRCA1-203ENST00000357654 Q8NBF4 154 aa4.07□□□□□ -1.76
BRCA1-203ENST00000357654 Q6ZSN1 163 aa4.07□□□□□ -1.76
BRCA1-203ENST00000357654 LINC00167Q96N53 147 aa4.07□□□□□ -1.76
BRCA1-203ENST00000357654 TTC28Q96AY4 2481 aa4.07□□□□□ -1.76
BRCA1-203ENST00000357654 MALRD1Q5VYJ5 2156 aa4.06□□□□□ -1.76
BRCA1-203ENST00000357654 SMIM26A0A096LP01 95 aa4.06□□□□□ -1.76
BRCA1-203ENST00000357654 PLXNA4Q9HCM2 1894 aa4.06□□□□□ -1.76
BRCA1-203ENST00000357654 CRIP1P50238 77 aa4.06□□□□□ -1.76
BRCA1-203ENST00000357654 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
BRCA1-203ENST00000357654 MED12LQ86YW9 2145 aa4.06□□□□□ -1.76
BRCA1-203ENST00000357654 IGLV5-48A0A075B6I7 105 aa4.06□□□□□ -1.76
BRCA1-203ENST00000357654 COX7CP15954 63 aa4.06□□□□□ -1.76
BRCA1-203ENST00000357654 SORL1Q92673 2214 aa4.05□□□□□ -1.76
BRCA1-203ENST00000357654 KIF26AQ9ULI4 1882 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-203ENST00000357654 SPTAN1Q13813 2472 aaKnown RBP4.05□□□□□ -1.76
BRCA1-203ENST00000357654 POLR2KP53803 58 aaKnown RBP4.05□□□□□ -1.76
BRCA1-203ENST00000357654 LINC01600Q96MT4 127 aa4.05□□□□□ -1.76
BRCA1-203ENST00000357654 TM2D3Q9BRN9 247 aa4.05□□□□□ -1.76
BRCA1-203ENST00000357654 C16orf95Q9H693 158 aa4.05□□□□□ -1.76
BRCA1-203ENST00000357654 IGLV1-40P01703 118 aa4.05□□□□□ -1.76
BRCA1-203ENST00000357654 IGLV1-50A0A075B6I6 118 aa4.05□□□□□ -1.76
BRCA1-203ENST00000357654 CHCHD7Q9BUK0 85 aa4.05□□□□□ -1.76
BRCA1-203ENST00000357654 ARHGAP21Q5T5U3 1957 aa4.04□□□□□ -1.76
BRCA1-203ENST00000357654 Q5VSD8 79 aa4.04□□□□□ -1.76
BRCA1-203ENST00000357654 IGLV5-45A0A087WSX0 123 aa4.04□□□□□ -1.76
BRCA1-203ENST00000357654 TRAV22A0A0B4J277 110 aa4.04□□□□□ -1.76
BRCA1-203ENST00000357654 K7EQZ3 153 aa4.04□□□□□ -1.76
BRCA1-203ENST00000357654 GAS8-AS1O95177 125 aa4.04□□□□□ -1.76
BRCA1-203ENST00000357654 KIF25-AS1Q9Y6Z4 181 aa4.04□□□□□ -1.76
BRCA1-203ENST00000357654 ZNF106Q9H2Y7 1883 aaKnown RBP4.04□□□□□ -1.76
BRCA1-203ENST00000357654 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
BRCA1-203ENST00000357654 DNAH10OSP0CZ25 163 aa4.04□□□□□ -1.76
BRCA1-203ENST00000357654 KRTAP27-1Q3LI81 207 aa4.04□□□□□ -1.76
BRCA1-203ENST00000357654 SPTBN5Q9NRC6 3674 aaKnown RBP4.04□□□□□ -1.76
BRCA1-203ENST00000357654 WNK1Q9H4A3 2382 aa4.03□□□□□ -1.76
BRCA1-203ENST00000357654 C2orf16Q68DN1 1984 aa4.03□□□□□ -1.76
BRCA1-203ENST00000357654 Q6ZSA8 131 aa4.03□□□□□ -1.76
BRCA1-203ENST00000357654 MGAMO43451 1857 aa4.03□□□□□ -1.76
BRCA1-203ENST00000357654 ST20-AS1Q8NBB2 130 aa4.03□□□□□ -1.76
BRCA1-203ENST00000357654 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
BRCA1-203ENST00000357654 C11orf21Q9P2W6 132 aa4.03□□□□□ -1.76
BRCA1-203ENST00000357654 OTOGLQ3ZCN5 2332 aa4.03□□□□□ -1.76
BRCA1-203ENST00000357654 ATG2AQ2TAZ0 1938 aa4.02□□□□□ -1.77
BRCA1-203ENST00000357654 TRANK1O15050 2925 aa4.02□□□□□ -1.77
BRCA1-203ENST00000357654 ZNF580Q9UK33 172 aa4.02□□□□□ -1.77
BRCA1-203ENST00000357654 PSORS1C2Q9UIG4 136 aa4.02□□□□□ -1.77
BRCA1-203ENST00000357654 TLX1NBP0CAT3 122 aa4.02□□□□□ -1.77
BRCA1-203ENST00000357654 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
BRCA1-203ENST00000357654 PRR14LQ5THK1 2151 aa4.02□□□□□ -1.77
BRCA1-203ENST00000357654 LINC00483Q53H64 154 aa4.02□□□□□ -1.77
BRCA1-203ENST00000357654 OBSL1O75147 1896 aa4.02□□□□□ -1.77
BRCA1-203ENST00000357654 SHANK1Q9Y566 2161 aa4.02□□□□□ -1.77
BRCA1-203ENST00000357654 NBASA2RRP1 2371 aa4.01□□□□□ -1.77
BRCA1-203ENST00000357654 KLLNB2CW77 178 aa4.01□□□□□ -1.77
BRCA1-203ENST00000357654 Q6ZQT0 140 aa4.01□□□□□ -1.77
BRCA1-203ENST00000357654 ANAPC11Q9NYG5 84 aa4.01□□□□□ -1.77
BRCA1-203ENST00000357654 FAM168BA1KXE4 195 aa4.01□□□□□ -1.77
BRCA1-203ENST00000357654 LINC00476Q8WZB0 136 aa4.01□□□□□ -1.77
BRCA1-203ENST00000357654 TP53AIP1Q9HCN2 124 aa4.01□□□□□ -1.77
BRCA1-203ENST00000357654 MED13LQ71F56 2210 aa4□□□□□ -1.77
BRCA1-203ENST00000357654 VPREB1P12018 145 aa4□□□□□ -1.77
BRCA1-203ENST00000357654 RAI1Q7Z5J4 1906 aaPredicted RBP4□□□□□ -1.77
BRCA1-203ENST00000357654 CACNA1HO95180 2353 aa4□□□□□ -1.77
BRCA1-203ENST00000357654 F8WDY8 70 aa4□□□□□ -1.77
BRCA1-203ENST00000357654 LINC00588Q9Y4M8 146 aa4□□□□□ -1.77
BRCA1-203ENST00000357654 COL4A3Q01955 1670 aa4□□□□□ -1.77
BRCA1-203ENST00000357654 KIAA1549Q9HCM3 1950 aa4□□□□□ -1.77
BRCA1-203ENST00000357654 PLA2G2DQ9UNK4 145 aa4□□□□□ -1.77
BRCA1-203ENST00000357654 COL5A1P20908 1838 aaPredicted RBP4□□□□□ -1.77
BRCA1-203ENST00000357654 UNC80Q8N2C7 3258 aa4□□□□□ -1.77
BRCA1-203ENST00000357654 TET2Q6N021 2002 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-203ENST00000357654 LINC00336Q6ZUF6 198 aa3.99□□□□□ -1.77
BRCA1-203ENST00000357654 LINC00528Q8N1L1 170 aa3.99□□□□□ -1.77
BRCA1-203ENST00000357654 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms