RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TSPAN13O95857 204 aa2.67□□□□□ -1.98
LIG4-201ENST00000356922 MIAQ16674 131 aa2.67□□□□□ -1.98
LIG4-201ENST00000356922 ATOH7Q8N100 152 aa2.67□□□□□ -1.98
LIG4-201ENST00000356922 IGHV3-64A0A075B6Q5 118 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 LINC00959A0A1B0GUT2 108 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 hDV102S1A0JD36 115 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 A6NDN8 102 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 APOMO95445 188 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 SLC25A34Q6PIV7 304 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 CHCHD10Q8WYQ3 142 aaPredicted RBP2.66□□□□□ -1.98
LIG4-201ENST00000356922 IFI27L1Q96BM0 104 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 LINC00526Q96FQ7 95 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 AMELXQ99217 191 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 PMCHL2Q9BQD1 86 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 B5MCH6 92 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 H3BRM9 83 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 SEC11AP67812 179 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 C6orf226Q5I0X4 101 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 BAALCQ8WXS3 180 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 PYGO1Q9Y3Y4 419 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 CSDC2Q9Y534 153 aaKnown RBP2.66□□□□□ -1.98
LIG4-201ENST00000356922 HSPG2P98160 4391 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 LRCOL1A6NCL2 159 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 COX7A2LO14548 114 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 SLPIP03973 132 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 FABP2P12104 132 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 PMVKQ15126 192 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 C5orf47Q569G3 176 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 LINC00242Q5T6M2 205 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 SPCS1Q9Y6A9 102 aa2.66□□□□□ -1.98
LIG4-201ENST00000356922 TRAV8-4A0A0B4J246 113 aa2.65□□□□□ -1.98
LIG4-201ENST00000356922 A0A0J9YXV3 536 aa2.65□□□□□ -1.98
LIG4-201ENST00000356922 K7EP34 96 aa2.65□□□□□ -1.98
LIG4-201ENST00000356922 LINC01620Q4KN68 170 aa2.65□□□□□ -1.98
LIG4-201ENST00000356922 HIGD2BQ4VC39 106 aa2.65□□□□□ -1.98
LIG4-201ENST00000356922 BVES-AS1Q5T3Y7 98 aa2.65□□□□□ -1.98
LIG4-201ENST00000356922 NTN5Q8WTR8 489 aaPredicted RBP2.65□□□□□ -1.98
LIG4-201ENST00000356922 TIMM21Q9BVV7 248 aa2.65□□□□□ -1.98
LIG4-201ENST00000356922 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.65□□□□□ -1.99
LIG4-201ENST00000356922 H3BUT2 72 aa2.65□□□□□ -1.99
LIG4-201ENST00000356922 UBE2D1P51668 147 aa2.65□□□□□ -1.99
LIG4-201ENST00000356922 KRTAP10-2P60368 255 aa2.65□□□□□ -1.99
LIG4-201ENST00000356922 FOXI1Q12951 378 aa2.65□□□□□ -1.99
LIG4-201ENST00000356922 VPS13BQ7Z7G8 4022 aa2.65□□□□□ -1.99
LIG4-201ENST00000356922 IGLV4-69A0A075B6H9 119 aa2.65□□□□□ -1.99
LIG4-201ENST00000356922 IGHV3OR16-9A0A0B4J2B5 98 aa2.65□□□□□ -1.99
LIG4-201ENST00000356922 HERVK_113P61574 105 aa2.65□□□□□ -1.99
LIG4-201ENST00000356922 MRPS36P82909 103 aaKnown RBP2.65□□□□□ -1.99
LIG4-201ENST00000356922 RYR1P21817 5038 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 SPINK8P0C7L1 97 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 C3orf79P0CE67 100 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 HERVK_113P63121 156 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 TIMM17AQ99595 171 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 CHAC1Q9BUX1 264 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 C14orf177Q52M58 125 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 CDKN2A-AS1Q9UH64 79 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 ERG28Q9UKR5 140 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 C9orf118A6NHY6 69 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 C15orf56Q8N910 161 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 CAMK2N2Q96S95 79 aa2.64□□□□□ -1.99
LIG4-201ENST00000356922 MRPL35Q9NZE8 188 aaKnown RBP2.64□□□□□ -1.99
LIG4-201ENST00000356922 C11orf86A6NJI1 115 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 M0QXV9 152 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 CD164L2Q6UWJ8 174 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 BIRC6Q9NR09 4857 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 A0A0U1RRA0 63 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 A0A1B0GVY2 172 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 USP17L23D6RBM5 183 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 MEIG1Q5JSS6 88 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 A0A087WTM6 91 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 IGLV5-52A0A0A0MRZ9 124 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 DPM2O94777 84 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 LGALS3P17931 250 aaKnown RBP2.63□□□□□ -1.99
LIG4-201ENST00000356922 SPAG11BQ08648 103 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 RAB37Q96AX2 223 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 IGKCP01834 107 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 NMUP48645 174 aa2.63□□□□□ -1.99
LIG4-201ENST00000356922 ZNF625Q96I27 306 aaPredicted RBP2.63□□□□□ -1.99
LIG4-201ENST00000356922 SYS1-DBNDD2H3BUS1 97 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 KIAA0087Q14695 138 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 C10orf25Q5T742 122 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 SCGB1D4Q6XE38 83 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 IGHV1-58A0A0C4DH39 117 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 IGKV2-24A0A0C4DH68 120 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 ZNF22P17026 224 aaPredicted RBP2.62□□□□□ -1.99
LIG4-201ENST00000356922 PLNP26678 52 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 RPL18AQ02543 176 aaKnown RBP2.62□□□□□ -1.99
LIG4-201ENST00000356922 C2orf82Q6UX34 121 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 FAM19A3Q7Z5A8 133 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 NAA38Q9BRA0 125 aaKnown RBP2.62□□□□□ -1.99
LIG4-201ENST00000356922 A0A1W2PPM0 123 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 F8VRH5 84 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 PANO1I0J062 215 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 PFN2P35080 140 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 GAGE2BQ13066 116 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 LINC00336Q6ZUF6 198 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 TP73-AS1Q9UF72 201 aa2.62□□□□□ -1.99
LIG4-201ENST00000356922 A0A087WZ39 114 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 C16orf90A8MZG2 172 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 F8W1H4 67 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms