RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CXCL5P42830 114 aa10.06□□□□□ -0.8
TRIM13-201ENST00000356017 LINC01545Q5VT33 79 aa10.06□□□□□ -0.8
TRIM13-201ENST00000356017 COX7B2Q8TF08 81 aa10.06□□□□□ -0.8
TRIM13-201ENST00000356017 IGLV5-39A0A0G2JS06 123 aa10.05□□□□□ -0.8
TRIM13-201ENST00000356017 PMCHL2Q9BQD1 86 aa10.05□□□□□ -0.8
TRIM13-201ENST00000356017 PRO1933Q9H354 126 aa10.05□□□□□ -0.8
TRIM13-201ENST00000356017 TMEM223A0PJW6 202 aa10.04□□□□□ -0.8
TRIM13-201ENST00000356017 C20orf202A1L168 122 aa10.04□□□□□ -0.8
TRIM13-201ENST00000356017 S100A12P80511 92 aa10.04□□□□□ -0.8
TRIM13-201ENST00000356017 RNF151Q2KHN1 245 aa10.04□□□□□ -0.8
TRIM13-201ENST00000356017 Q6ZRU5 148 aa10.04□□□□□ -0.8
TRIM13-201ENST00000356017 EPPK1P58107 5090 aaKnown RBP10.04□□□□□ -0.8
TRIM13-201ENST00000356017 PKHD1P08F94 4074 aa10.04□□□□□ -0.8
TRIM13-201ENST00000356017 KRTAP10-1P60331 282 aa10.04□□□□□ -0.8
TRIM13-201ENST00000356017 LINC01620Q4KN68 170 aa10.04□□□□□ -0.8
TRIM13-201ENST00000356017 LINC00587B1AMM8 73 aa10.03□□□□□ -0.8
TRIM13-201ENST00000356017 C2orf82Q6UX34 121 aa10.03□□□□□ -0.8
TRIM13-201ENST00000356017 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
TRIM13-201ENST00000356017 SDIM1Q6ZPB5 146 aa10.03□□□□□ -0.8
TRIM13-201ENST00000356017 TRBV30A0A0K0K1B3 111 aa10.02□□□□□ -0.81
TRIM13-201ENST00000356017 HERVK_113P61574 105 aa10.02□□□□□ -0.81
TRIM13-201ENST00000356017 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
TRIM13-201ENST00000356017 C10orf25Q5T742 122 aa10□□□□□ -0.81
TRIM13-201ENST00000356017 C6orf48Q9UBA6 75 aa10□□□□□ -0.81
TRIM13-201ENST00000356017 LOC107984640A0A0U1RRK4 108 aa9.99□□□□□ -0.81
TRIM13-201ENST00000356017 Q6ZSA8 131 aa9.98□□□□□ -0.81
TRIM13-201ENST00000356017 DNAH5Q8TE73 4624 aa9.97□□□□□ -0.81
TRIM13-201ENST00000356017 PLEKHB2Q96CS7 222 aa9.97□□□□□ -0.81
TRIM13-201ENST00000356017 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
TRIM13-201ENST00000356017 TLX1NBP0CAT3 122 aa9.96□□□□□ -0.81
TRIM13-201ENST00000356017 ATOH7Q8N100 152 aa9.96□□□□□ -0.81
TRIM13-201ENST00000356017 TSTD3H0UI37 97 aa9.96□□□□□ -0.82
TRIM13-201ENST00000356017 LEPROTO15243 131 aa9.96□□□□□ -0.82
TRIM13-201ENST00000356017 CDK2AP2O75956 126 aa9.96□□□□□ -0.82
TRIM13-201ENST00000356017 E9PLD3 99 aa9.95□□□□□ -0.82
TRIM13-201ENST00000356017 NDUFC2-KCTD14E9PQ53 114 aa9.95□□□□□ -0.82
TRIM13-201ENST00000356017 RPL18AQ02543 176 aaKnown RBP9.95□□□□□ -0.82
TRIM13-201ENST00000356017 VAMP8Q9BV40 100 aa9.95□□□□□ -0.82
TRIM13-201ENST00000356017 FAM30AQ9NZY2 134 aa9.95□□□□□ -0.82
TRIM13-201ENST00000356017 PAM16Q9Y3D7 125 aa9.95□□□□□ -0.82
TRIM13-201ENST00000356017 CIRBPQ14011 172 aaKnown RBP9.94□□□□□ -0.82
TRIM13-201ENST00000356017 MAJINQ3KP22 176 aa9.94□□□□□ -0.82
TRIM13-201ENST00000356017 DPH3Q96FX2 82 aa9.94□□□□□ -0.82
TRIM13-201ENST00000356017 A0A096LNI7 61 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 J3QQQ9 107 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 DDTP30046 118 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 PTTG1IPP53801 180 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 GAGE2BQ13066 116 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 C9orf116Q5BN46 136 aaPredicted RBP9.93□□□□□ -0.82
TRIM13-201ENST00000356017 STPG4Q8N801 248 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 ZNF625Q96I27 306 aaPredicted RBP9.93□□□□□ -0.82
TRIM13-201ENST00000356017 DYNC1H1Q14204 4646 aaKnown RBP9.93□□□□□ -0.82
TRIM13-201ENST00000356017 LGALS3P17931 250 aaKnown RBP9.93□□□□□ -0.82
TRIM13-201ENST00000356017 NMUP48645 174 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 HERV-K104P63124 156 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 Q6ZRP5 223 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 SPACA4Q8TDM5 124 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 NDUFA12Q9UI09 145 aa9.93□□□□□ -0.82
TRIM13-201ENST00000356017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
TRIM13-201ENST00000356017 LRP1BQ9NZR2 4599 aa9.92□□□□□ -0.82
TRIM13-201ENST00000356017 MYMXA0A1B0GTQ4 84 aa9.92□□□□□ -0.82
TRIM13-201ENST00000356017 COX17Q14061 63 aa9.92□□□□□ -0.82
TRIM13-201ENST00000356017 CHTF8P0CG12 524 aa9.91□□□□□ -0.82
TRIM13-201ENST00000356017 SPATA45Q537H7 98 aa9.91□□□□□ -0.82
TRIM13-201ENST00000356017 XGP55808 180 aa9.9□□□□□ -0.82
TRIM13-201ENST00000356017 ERG28Q9UKR5 140 aa9.9□□□□□ -0.82
TRIM13-201ENST00000356017 PANO1I0J062 215 aa9.89□□□□□ -0.83
TRIM13-201ENST00000356017 TSPEAR-AS2P59090 65 aa9.89□□□□□ -0.83
TRIM13-201ENST00000356017 GAGE2EQ4V326 116 aa9.89□□□□□ -0.83
TRIM13-201ENST00000356017 SCXQ7RTU7 201 aa9.89□□□□□ -0.83
TRIM13-201ENST00000356017 GAGE2DQ9UEU5 116 aa9.89□□□□□ -0.83
TRIM13-201ENST00000356017 HSBP1L1C9JCN9 74 aa9.89□□□□□ -0.83
TRIM13-201ENST00000356017 PFN2P35080 140 aa9.89□□□□□ -0.83
TRIM13-201ENST00000356017 CIRBP-AS1Q8TBR5 109 aa9.88□□□□□ -0.83
TRIM13-201ENST00000356017 A0A087WYN8 130 aa9.87□□□□□ -0.83
TRIM13-201ENST00000356017 C14orf144Q96I85 54 aa9.87□□□□□ -0.83
TRIM13-201ENST00000356017 BIRC6Q9NR09 4857 aa9.87□□□□□ -0.83
TRIM13-201ENST00000356017 MEIG1Q5JSS6 88 aa9.86□□□□□ -0.83
TRIM13-201ENST00000356017 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
TRIM13-201ENST00000356017 IGKV2D-26A0A0A0MRZ7 120 aa9.85□□□□□ -0.83
TRIM13-201ENST00000356017 LINC00158P58513 81 aa9.85□□□□□ -0.83
TRIM13-201ENST00000356017 HAMPP81172 84 aa9.85□□□□□ -0.83
TRIM13-201ENST00000356017 MIEN1Q9BRT3 115 aa9.85□□□□□ -0.83
TRIM13-201ENST00000356017 ANKRD39Q53RE8 183 aa9.84□□□□□ -0.83
TRIM13-201ENST00000356017 XAGE1AQ9HD64 81 aa9.84□□□□□ -0.83
TRIM13-201ENST00000356017 C9orf129Q5T035 196 aaKnown RBP9.83□□□□□ -0.84
TRIM13-201ENST00000356017 DNAH8Q96JB1 4490 aa9.83□□□□□ -0.84
TRIM13-201ENST00000356017 ZNF815PA8K554 130 aa9.82□□□□□ -0.84
TRIM13-201ENST00000356017 SMIM13P0DJ93 91 aa9.82□□□□□ -0.84
TRIM13-201ENST00000356017 TP73-AS1Q9UF72 201 aa9.82□□□□□ -0.84
TRIM13-201ENST00000356017 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
TRIM13-201ENST00000356017 A0A0J9YXY3 114 aa9.81□□□□□ -0.84
TRIM13-201ENST00000356017 A0A0U1RRA0 63 aa9.81□□□□□ -0.84
TRIM13-201ENST00000356017 A0A1W2PNN7 141 aa9.81□□□□□ -0.84
TRIM13-201ENST00000356017 SND1-IT1Q9HBX3 110 aa9.81□□□□□ -0.84
TRIM13-201ENST00000356017 UQCR10Q9UDW1 63 aa9.81□□□□□ -0.84
TRIM13-201ENST00000356017 APOBP04114 4563 aaKnown RBP9.8□□□□□ -0.84
TRIM13-201ENST00000356017 MIR7-3HGQ8N6C7 128 aa9.79□□□□□ -0.84
TRIM13-201ENST00000356017 TTTY13Q9BZ97 58 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms