RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 TLN2Q9Y4G6 2542 aa13.19□□□□□ -0.3
PRPF39-201ENST00000355765 FAM236DA0A1B0GTK5 79 aa13.18□□□□□ -0.3
PRPF39-201ENST00000355765 FAM236CP0DP71 79 aa13.18□□□□□ -0.3
PRPF39-201ENST00000355765 TRGV2A0A075B6R0 118 aa13.18□□□□□ -0.3
PRPF39-201ENST00000355765 NBPF19A0A087WUL8 3843 aa13.18□□□□□ -0.3
PRPF39-201ENST00000355765 LY6G6DO95868 133 aa13.18□□□□□ -0.3
PRPF39-201ENST00000355765 DEFB114Q30KQ6 69 aa13.18□□□□□ -0.3
PRPF39-201ENST00000355765 Q8N814 137 aa13.18□□□□□ -0.3
PRPF39-201ENST00000355765 A0A096LNT2 108 aa13.17□□□□□ -0.3
PRPF39-201ENST00000355765 JMJD7-PLA2G4BH0Y9G9 81 aa13.17□□□□□ -0.3
PRPF39-201ENST00000355765 PLA2G2AP14555 144 aa13.17□□□□□ -0.3
PRPF39-201ENST00000355765 UBL5Q9BZL1 73 aa13.16□□□□□ -0.3
PRPF39-201ENST00000355765 A0A087WZ39 114 aa13.16□□□□□ -0.3
PRPF39-201ENST00000355765 NANOS2P60321 138 aaKnown RBP13.16□□□□□ -0.3
PRPF39-201ENST00000355765 ATP5EP2Q5VTU8 51 aa13.15□□□□□ -0.3
PRPF39-201ENST00000355765 FBN2P35556 2912 aa13.15□□□□□ -0.3
PRPF39-201ENST00000355765 NDUFC2-KCTD14E9PQ53 114 aa13.14□□□□□ -0.31
PRPF39-201ENST00000355765 NIPBLQ6KC79 2804 aaeCLIP13.14□□□□□ -0.31
PRPF39-201ENST00000355765 ZNF843Q8N446 348 aa13.14□□□□□ -0.31
PRPF39-201ENST00000355765 ABCA12Q86UK0 2595 aa13.13□□□□□ -0.31
PRPF39-201ENST00000355765 PTPN13Q12923 2485 aa13.13□□□□□ -0.31
PRPF39-201ENST00000355765 TMEM256-PLSCR3K7ERE1 68 aa13.13□□□□□ -0.31
PRPF39-201ENST00000355765 CLPSL2Q6UWE3 100 aa13.13□□□□□ -0.31
PRPF39-201ENST00000355765 UBR5O95071 2799 aaPredicted RBP13.13□□□□□ -0.31
PRPF39-201ENST00000355765 TMEM86BQ8N661 226 aa13.13□□□□□ -0.31
PRPF39-201ENST00000355765 LINC00167Q96N53 147 aa13.13□□□□□ -0.31
PRPF39-201ENST00000355765 SNURFQ9Y675 71 aa13.13□□□□□ -0.31
PRPF39-201ENST00000355765 TRGV4A0A0C4DH28 118 aa13.12□□□□□ -0.31
PRPF39-201ENST00000355765 H7BZZ5 65 aa13.11□□□□□ -0.31
PRPF39-201ENST00000355765 M0R2N4 97 aa13.11□□□□□ -0.31
PRPF39-201ENST00000355765 LYPD5Q6UWN5 251 aa13.11□□□□□ -0.31
PRPF39-201ENST00000355765 ANKRD17O75179 2603 aaKnown RBP13.1□□□□□ -0.31
PRPF39-201ENST00000355765 TRBV6-8A0A0A6YYG3 113 aa13.1□□□□□ -0.31
PRPF39-201ENST00000355765 LINC00959A0A1B0GUT2 108 aa13.1□□□□□ -0.31
PRPF39-201ENST00000355765 SETD2Q9BYW2 2564 aaPredicted RBP13.09□□□□□ -0.31
PRPF39-201ENST00000355765 HAMPP81172 84 aa13.09□□□□□ -0.31
PRPF39-201ENST00000355765 LINC00336Q6ZUF6 198 aa13.09□□□□□ -0.31
PRPF39-201ENST00000355765 C11orf44Q8N8P7 122 aa13.09□□□□□ -0.31
PRPF39-201ENST00000355765 TRAV10A0A0B4J240 114 aa13.08□□□□□ -0.32
PRPF39-201ENST00000355765 C6orf99Q4VX62 202 aa13.08□□□□□ -0.32
PRPF39-201ENST00000355765 RMI2Q96E14 147 aa13.08□□□□□ -0.32
PRPF39-201ENST00000355765 SETXQ7Z333 2677 aaKnown RBP13.07□□□□□ -0.32
PRPF39-201ENST00000355765 WFDC10AQ9H1F0 79 aa13.06□□□□□ -0.32
PRPF39-201ENST00000355765 SERP1Q9Y6X1 66 aa13.06□□□□□ -0.32
PRPF39-201ENST00000355765 A0A1W2PRX2 142 aa13.06□□□□□ -0.32
PRPF39-201ENST00000355765 TRAV7A0A075B6U4 112 aa13.05□□□□□ -0.32
PRPF39-201ENST00000355765 TRBV10-3A0A0K0K1G6 114 aa13.05□□□□□ -0.32
PRPF39-201ENST00000355765 PLAC8L1A1L4L8 177 aa13.05□□□□□ -0.32
PRPF39-201ENST00000355765 C9orf116Q5BN46 136 aaPredicted RBP13.05□□□□□ -0.32
PRPF39-201ENST00000355765 LINC01356Q8N9X3 169 aa13.05□□□□□ -0.32
PRPF39-201ENST00000355765 C4orf3Q8WVX3 66 aa13.05□□□□□ -0.32
PRPF39-201ENST00000355765 LAMTOR3Q9UHA4 124 aa13.05□□□□□ -0.32
PRPF39-201ENST00000355765 Q6YL49 198 aa13.04□□□□□ -0.32
PRPF39-201ENST00000355765 FN1P02751 2386 aaKnown RBP13.04□□□□□ -0.32
PRPF39-201ENST00000355765 RPL35AP18077 110 aaKnown RBP13.04□□□□□ -0.32
PRPF39-201ENST00000355765 LINC01547P58512 204 aaPredicted RBP13.04□□□□□ -0.32
PRPF39-201ENST00000355765 Q6ZQT0 140 aa13.04□□□□□ -0.32
PRPF39-201ENST00000355765 RBM3P98179 157 aaKnown RBP13.03□□□□□ -0.32
PRPF39-201ENST00000355765 Q8NDZ9 215 aa13.03□□□□□ -0.32
PRPF39-201ENST00000355765 SPATA3Q8NHX4 192 aa13.03□□□□□ -0.32
PRPF39-201ENST00000355765 MRAPQ8TCY5 172 aa13.03□□□□□ -0.32
PRPF39-201ENST00000355765 F8WEM9 126 aa13.02□□□□□ -0.33
PRPF39-201ENST00000355765 GIG44P09565 113 aaPredicted RBP13.02□□□□□ -0.33
PRPF39-201ENST00000355765 NAV2Q8IVL1 2488 aa13.02□□□□□ -0.33
PRPF39-201ENST00000355765 EPM2AB3EWF7 344 aa13.01□□□□□ -0.33
PRPF39-201ENST00000355765 SCXQ7RTU7 201 aa13.01□□□□□ -0.33
PRPF39-201ENST00000355765 TEX15Q9BXT5 2789 aa13.01□□□□□ -0.33
PRPF39-201ENST00000355765 Q6ZVQ6 151 aa13□□□□□ -0.33
PRPF39-201ENST00000355765 Q8IZM0 81 aa13□□□□□ -0.33
PRPF39-201ENST00000355765 A0A096LPF7 62 aa12.99□□□□□ -0.33
PRPF39-201ENST00000355765 WFDC11Q8NEX6 87 aa12.99□□□□□ -0.33
PRPF39-201ENST00000355765 NF1P21359 2839 aa12.99□□□□□ -0.33
PRPF39-201ENST00000355765 LINC00482Q8N8I6 264 aa12.99□□□□□ -0.33
PRPF39-201ENST00000355765 C16orf74Q96GX8 76 aa12.99□□□□□ -0.33
PRPF39-201ENST00000355765 FP248Q71RG6 208 aaPredicted RBP12.99□□□□□ -0.33
PRPF39-201ENST00000355765 TENM4Q6N022 2769 aa12.98□□□□□ -0.33
PRPF39-201ENST00000355765 LINC00575Q6W349 94 aa12.98□□□□□ -0.33
PRPF39-201ENST00000355765 PRO0628Q9UI54 55 aa12.98□□□□□ -0.33
PRPF39-201ENST00000355765 KLKP1Q107X0 134 aa12.98□□□□□ -0.33
PRPF39-201ENST00000355765 KRTAP10-9P60411 292 aa12.97□□□□□ -0.33
PRPF39-201ENST00000355765 C1orf43Q9BWL3 253 aa12.97□□□□□ -0.33
PRPF39-201ENST00000355765 SONP18583 2426 aaKnown RBP12.97□□□□□ -0.33
PRPF39-201ENST00000355765 DEFB130BP0DP73 79 aa12.97□□□□□ -0.33
PRPF39-201ENST00000355765 DEFB130AP0DP74 79 aa12.97□□□□□ -0.33
PRPF39-201ENST00000355765 CR1P17927 2039 aa12.97□□□□□ -0.33
PRPF39-201ENST00000355765 LINC00474Q9P2X8 69 aa12.97□□□□□ -0.33
PRPF39-201ENST00000355765 IGLV10-54A0A075B6I4 117 aa12.96□□□□□ -0.33
PRPF39-201ENST00000355765 LINC00269Q8N2A0 174 aa12.96□□□□□ -0.34
PRPF39-201ENST00000355765 ZNF561-AS1K7EIQ3 104 aa12.95□□□□□ -0.34
PRPF39-201ENST00000355765 TM2D3Q9BRN9 247 aa12.95□□□□□ -0.34
PRPF39-201ENST00000355765 C16orf95Q9H693 158 aa12.95□□□□□ -0.34
PRPF39-201ENST00000355765 PKIGQ9Y2B9 76 aa12.95□□□□□ -0.34
PRPF39-201ENST00000355765 NBEAL2Q6ZNJ1 2754 aa12.94□□□□□ -0.34
PRPF39-201ENST00000355765 Q8N3U1 123 aa12.94□□□□□ -0.34
PRPF39-201ENST00000355765 APCP25054 2843 aa12.94□□□□□ -0.34
PRPF39-201ENST00000355765 Q6ZQY7 126 aa12.93□□□□□ -0.34
PRPF39-201ENST00000355765 CCDC168Q8NDH2 2452 aa12.92□□□□□ -0.34
PRPF39-201ENST00000355765 LOC110117498A0A087WWA1 95 aa12.92□□□□□ -0.34
PRPF39-201ENST00000355765 GYPEP15421 78 aa12.92□□□□□ -0.34
PRPF39-201ENST00000355765 KIAA0087Q14695 138 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms