RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 CHTF8P0CG12 524 aa7.22□□□□□ -1.25
COL11A1-201ENST00000353414 C11orf21Q9P2W6 132 aa7.22□□□□□ -1.25
COL11A1-201ENST00000353414 A0A087WVE0 104 aa7.22□□□□□ -1.25
COL11A1-201ENST00000353414 A0A087WYN8 130 aa7.21□□□□□ -1.26
COL11A1-201ENST00000353414 TRBV30A0A0K0K1B3 111 aa7.2□□□□□ -1.26
COL11A1-201ENST00000353414 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
COL11A1-201ENST00000353414 NRACQ8N912 160 aa7.2□□□□□ -1.26
COL11A1-201ENST00000353414 NOTCH2Q04721 2471 aa7.19□□□□□ -1.26
COL11A1-201ENST00000353414 CDC42SE2Q9NRR3 84 aa7.19□□□□□ -1.26
COL11A1-201ENST00000353414 IGLV8-61A0A075B6I0 122 aa7.18□□□□□ -1.26
COL11A1-201ENST00000353414 CSDC2Q9Y534 153 aaKnown RBP7.18□□□□□ -1.26
COL11A1-201ENST00000353414 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
COL11A1-201ENST00000353414 SPINT4Q6UDR6 99 aa7.17□□□□□ -1.26
COL11A1-201ENST00000353414 ZNF580Q9UK33 172 aa7.17□□□□□ -1.26
COL11A1-201ENST00000353414 A0A087WSZ3 146 aa7.17□□□□□ -1.26
COL11A1-201ENST00000353414 DOPEY1Q5JWR5 2465 aa7.17□□□□□ -1.26
COL11A1-201ENST00000353414 H0Y9P7 68 aa7.17□□□□□ -1.26
COL11A1-201ENST00000353414 LINC00242Q5T6M2 205 aa7.17□□□□□ -1.26
COL11A1-201ENST00000353414 HCG22E2RYF7 251 aa7.16□□□□□ -1.26
COL11A1-201ENST00000353414 CCDC168Q8NDH2 2452 aa7.16□□□□□ -1.26
COL11A1-201ENST00000353414 LINC00575Q6W349 94 aa7.16□□□□□ -1.26
COL11A1-201ENST00000353414 Q6ZSN1 163 aa7.16□□□□□ -1.26
COL11A1-201ENST00000353414 COX17Q14061 63 aa7.15□□□□□ -1.26
COL11A1-201ENST00000353414 TRBV7-7A0A0K0K1E9 115 aa7.15□□□□□ -1.26
COL11A1-201ENST00000353414 ZNF295-AS1Q8N0V1 137 aa7.15□□□□□ -1.26
COL11A1-201ENST00000353414 ODF3L2Q3SX64 289 aa7.15□□□□□ -1.27
COL11A1-201ENST00000353414 MDFIQ99750 246 aa7.15□□□□□ -1.27
COL11A1-201ENST00000353414 C11orf1Q9H5F2 150 aa7.14□□□□□ -1.27
COL11A1-201ENST00000353414 Q8IZM0 81 aa7.14□□□□□ -1.27
COL11A1-201ENST00000353414 IGLV1-40P01703 118 aa7.14□□□□□ -1.27
COL11A1-201ENST00000353414 FHL2Q14192 279 aa7.14□□□□□ -1.27
COL11A1-201ENST00000353414 Q8N814 137 aa7.14□□□□□ -1.27
COL11A1-201ENST00000353414 P0C879 139 aa7.13□□□□□ -1.27
COL11A1-201ENST00000353414 MOBPQ13875 183 aa7.13□□□□□ -1.27
COL11A1-201ENST00000353414 TRAV7A0A075B6U4 112 aa7.13□□□□□ -1.27
COL11A1-201ENST00000353414 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.13□□□□□ -1.27
COL11A1-201ENST00000353414 C5orf42Q9H799 3197 aa7.13□□□□□ -1.27
COL11A1-201ENST00000353414 EIF4EBP1Q13541 118 aaPredicted RBP7.12□□□□□ -1.27
COL11A1-201ENST00000353414 NTM-AS1Q6ZSK4 140 aa7.12□□□□□ -1.27
COL11A1-201ENST00000353414 J3QL48 77 aa7.12□□□□□ -1.27
COL11A1-201ENST00000353414 SPAG11AQ6PDA7 123 aa7.12□□□□□ -1.27
COL11A1-201ENST00000353414 LYPD5Q6UWN5 251 aa7.12□□□□□ -1.27
COL11A1-201ENST00000353414 LINC00574Q9H8X3 128 aa7.12□□□□□ -1.27
COL11A1-201ENST00000353414 FSTL3O95633 263 aa7.12□□□□□ -1.27
COL11A1-201ENST00000353414 Q6ZRU5 148 aa7.12□□□□□ -1.27
COL11A1-201ENST00000353414 PIEZO2Q9H5I5 2752 aa7.12□□□□□ -1.27
COL11A1-201ENST00000353414 KLLNB2CW77 178 aa7.11□□□□□ -1.27
COL11A1-201ENST00000353414 C2orf91Q6ZV80 131 aa7.11□□□□□ -1.27
COL11A1-201ENST00000353414 C16orf90A8MZG2 172 aa7.1□□□□□ -1.27
COL11A1-201ENST00000353414 Q6JHZ5 121 aa7.1□□□□□ -1.27
COL11A1-201ENST00000353414 CRIP3Q6Q6R5 217 aa7.09□□□□□ -1.27
COL11A1-201ENST00000353414 Q8N6K4 173 aa7.09□□□□□ -1.27
COL11A1-201ENST00000353414 SMCR5Q8TEV8 140 aa7.09□□□□□ -1.27
COL11A1-201ENST00000353414 CHCHD7Q9BUK0 85 aa7.09□□□□□ -1.27
COL11A1-201ENST00000353414 COL27A1Q8IZC6 1860 aaPredicted RBP7.09□□□□□ -1.27
COL11A1-201ENST00000353414 IMUPQ9GZP8 106 aa7.09□□□□□ -1.27
COL11A1-201ENST00000353414 ACACBO00763 2458 aa7.09□□□□□ -1.28
COL11A1-201ENST00000353414 FAM229AH3BQW9 127 aa7.08□□□□□ -1.28
COL11A1-201ENST00000353414 MRPS36P82909 103 aaKnown RBP7.08□□□□□ -1.28
COL11A1-201ENST00000353414 FHL3Q13643 280 aa7.08□□□□□ -1.28
COL11A1-201ENST00000353414 ADAMTSL4-AS1Q5T5F5 129 aa7.08□□□□□ -1.28
COL11A1-201ENST00000353414 C22orf24Q9Y442 160 aa7.08□□□□□ -1.28
COL11A1-201ENST00000353414 IGLV1-51P01701 117 aa7.08□□□□□ -1.28
COL11A1-201ENST00000353414 Q8N3U1 123 aa7.08□□□□□ -1.28
COL11A1-201ENST00000353414 TSPEAR-AS2P59090 65 aa7.07□□□□□ -1.28
COL11A1-201ENST00000353414 EGFEM1PQ0D2K5 195 aa7.07□□□□□ -1.28
COL11A1-201ENST00000353414 CEP350Q5VT06 3117 aa7.07□□□□□ -1.28
COL11A1-201ENST00000353414 PHF5AQ7RTV0 110 aaKnown RBP7.07□□□□□ -1.28
COL11A1-201ENST00000353414 SMIM1B2RUZ4 78 aa7.07□□□□□ -1.28
COL11A1-201ENST00000353414 A0A1B0GU69 56 aa7.06□□□□□ -1.28
COL11A1-201ENST00000353414 POLR2KP53803 58 aaKnown RBP7.06□□□□□ -1.28
COL11A1-201ENST00000353414 LIMD2Q9BT23 127 aa7.06□□□□□ -1.28
COL11A1-201ENST00000353414 hDV103S1A0JD37 113 aa7.05□□□□□ -1.28
COL11A1-201ENST00000353414 C4orf26Q17RF5 130 aa7.05□□□□□ -1.28
COL11A1-201ENST00000353414 A0A1W2PPR1 153 aa7.05□□□□□ -1.28
COL11A1-201ENST00000353414 NHLRC4P0CG21 123 aaPredicted RBP7.04□□□□□ -1.28
COL11A1-201ENST00000353414 LRRK2Q5S007 2527 aa7.04□□□□□ -1.28
COL11A1-201ENST00000353414 ANKHD1Q8IWZ3 2542 aaKnown RBP7.04□□□□□ -1.28
COL11A1-201ENST00000353414 KIAA0087Q14695 138 aa7.04□□□□□ -1.28
COL11A1-201ENST00000353414 TYMSOSQ8TAI1 123 aa7.04□□□□□ -1.28
COL11A1-201ENST00000353414 COX6B2Q6YFQ2 88 aa7.03□□□□□ -1.28
COL11A1-201ENST00000353414 C1orf64Q8NEQ6 169 aa7.03□□□□□ -1.28
COL11A1-201ENST00000353414 IGIPA6NJ69 53 aa7.03□□□□□ -1.28
COL11A1-201ENST00000353414 RPL37AP61513 92 aaKnown RBP7.02□□□□□ -1.28
COL11A1-201ENST00000353414 SMIM29Q86T20 159 aa7.02□□□□□ -1.29
COL11A1-201ENST00000353414 Q96NJ1 140 aa7.02□□□□□ -1.29
COL11A1-201ENST00000353414 SSBP3-AS1Q7Z2R9 100 aa7.02□□□□□ -1.29
COL11A1-201ENST00000353414 C16orf95Q9H693 158 aa7.02□□□□□ -1.29
COL11A1-201ENST00000353414 TTC28Q96AY4 2481 aa7.01□□□□□ -1.29
COL11A1-201ENST00000353414 RTL8CO15255 209 aa7□□□□□ -1.29
COL11A1-201ENST00000353414 XIRP2A4UGR9 3374 aa7□□□□□ -1.29
COL11A1-201ENST00000353414 MKI67P46013 3256 aaKnown RBP6.99□□□□□ -1.29
COL11A1-201ENST00000353414 C9orf92A6NGG3 77 aa6.99□□□□□ -1.29
COL11A1-201ENST00000353414 TMEM254Q8TBM7 123 aa6.98□□□□□ -1.29
COL11A1-201ENST00000353414 SMR3BP02814 79 aaPredicted RBP6.97□□□□□ -1.29
COL11A1-201ENST00000353414 MYO18BQ8IUG5 2567 aa6.97□□□□□ -1.29
COL11A1-201ENST00000353414 LINC00315P59091 139 aa6.97□□□□□ -1.29
COL11A1-201ENST00000353414 LINC00313P59037 77 aa6.97□□□□□ -1.29
COL11A1-201ENST00000353414 ATP11AUNQ6ZP68 121 aa6.96□□□□□ -1.29
COL11A1-201ENST00000353414 CACNA1AO00555 2505 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms