RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 COX8AP10176 69 aa17.69■□□□□ 0.42
SSBP4-202ENST00000348495 CKS1BP61024 79 aa17.69■□□□□ 0.42
SSBP4-202ENST00000348495 F8WDY8 70 aa17.69■□□□□ 0.42
SSBP4-202ENST00000348495 SLPIP03973 132 aa17.69■□□□□ 0.42
SSBP4-202ENST00000348495 RYR2Q92736 4967 aa17.68■□□□□ 0.42
SSBP4-202ENST00000348495 TNP2Q05952 138 aa17.68■□□□□ 0.42
SSBP4-202ENST00000348495 C14orf144Q96I85 54 aa17.68■□□□□ 0.42
SSBP4-202ENST00000348495 ZNF815PA8K554 130 aa17.67■□□□□ 0.42
SSBP4-202ENST00000348495 SFTA2Q6UW10 78 aa17.67■□□□□ 0.42
SSBP4-202ENST00000348495 BOD1L2Q8IYS8 172 aa17.67■□□□□ 0.42
SSBP4-202ENST00000348495 Q8N814 137 aa17.67■□□□□ 0.42
SSBP4-202ENST00000348495 MYMXA0A1B0GTQ4 84 aa17.66■□□□□ 0.42
SSBP4-202ENST00000348495 C10orf25Q5T742 122 aa17.66■□□□□ 0.42
SSBP4-202ENST00000348495 UNQ6190/PRO20217Q6UXQ8 127 aa17.66■□□□□ 0.42
SSBP4-202ENST00000348495 CAMK2N2Q96S95 79 aa17.66■□□□□ 0.42
SSBP4-202ENST00000348495 DLEU1O43261 78 aa17.64■□□□□ 0.41
SSBP4-202ENST00000348495 FRAS1Q86XX4 4008 aa17.64■□□□□ 0.41
SSBP4-202ENST00000348495 TP73-AS1Q9UF72 201 aa17.64■□□□□ 0.41
SSBP4-202ENST00000348495 HERV-K104P63124 156 aa17.63■□□□□ 0.41
SSBP4-202ENST00000348495 SYCNQ0VAF6 134 aa17.63■□□□□ 0.41
SSBP4-202ENST00000348495 Q6ZRU5 148 aa17.63■□□□□ 0.41
SSBP4-202ENST00000348495 CNBPP62633 177 aaKnown RBP17.62■□□□□ 0.41
SSBP4-202ENST00000348495 C6orf48Q9UBA6 75 aa17.61■□□□□ 0.41
SSBP4-202ENST00000348495 A0A0J9YXY3 114 aa17.6■□□□□ 0.41
SSBP4-202ENST00000348495 SLC25A34Q6PIV7 304 aa17.6■□□□□ 0.41
SSBP4-202ENST00000348495 RYR3Q15413 4870 aa17.6■□□□□ 0.41
SSBP4-202ENST00000348495 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-202ENST00000348495 CARD19Q96LW7 228 aa17.59■□□□□ 0.41
SSBP4-202ENST00000348495 TRBV30A0A0K0K1B3 111 aa17.58■□□□□ 0.41
SSBP4-202ENST00000348495 PRO1933Q9H354 126 aa17.58■□□□□ 0.41
SSBP4-202ENST00000348495 FAT2Q9NYQ8 4349 aa17.57■□□□□ 0.4
SSBP4-202ENST00000348495 RNF151Q2KHN1 245 aa17.56■□□□□ 0.4
SSBP4-202ENST00000348495 LINC00336Q6ZUF6 198 aa17.56■□□□□ 0.4
SSBP4-202ENST00000348495 EREGO14944 169 aa17.55■□□□□ 0.4
SSBP4-202ENST00000348495 C9orf116Q5BN46 136 aaPredicted RBP17.55■□□□□ 0.4
SSBP4-202ENST00000348495 UQCR10Q9UDW1 63 aa17.55■□□□□ 0.4
SSBP4-202ENST00000348495 ERG28Q9UKR5 140 aa17.55■□□□□ 0.4
SSBP4-202ENST00000348495 SCGB1D4Q6XE38 83 aa17.54■□□□□ 0.4
SSBP4-202ENST00000348495 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.53■□□□□ 0.4
SSBP4-202ENST00000348495 LITAFQ99732 161 aa17.52■□□□□ 0.4
SSBP4-202ENST00000348495 C2orf91Q6ZV80 131 aa17.52■□□□□ 0.39
SSBP4-202ENST00000348495 TIMM17BO60830 172 aa17.51■□□□□ 0.39
SSBP4-202ENST00000348495 COX17Q14061 63 aa17.51■□□□□ 0.39
SSBP4-202ENST00000348495 MEIG1Q5JSS6 88 aa17.51■□□□□ 0.39
SSBP4-202ENST00000348495 MIEN1Q9BRT3 115 aa17.51■□□□□ 0.39
SSBP4-202ENST00000348495 LINC00587B1AMM8 73 aa17.5■□□□□ 0.39
SSBP4-202ENST00000348495 SMIM13P0DJ93 91 aa17.5■□□□□ 0.39
SSBP4-202ENST00000348495 TSTD3H0UI37 97 aa17.49■□□□□ 0.39
SSBP4-202ENST00000348495 PFN2P35080 140 aa17.49■□□□□ 0.39
SSBP4-202ENST00000348495 C9orf163Q8N9P6 203 aa17.49■□□□□ 0.39
SSBP4-202ENST00000348495 ADAMTSL4-AS1Q5T5F5 129 aa17.48■□□□□ 0.39
SSBP4-202ENST00000348495 HIGD1BQ9P298 99 aa17.48■□□□□ 0.39
SSBP4-202ENST00000348495 CIRBPQ14011 172 aaKnown RBP17.47■□□□□ 0.39
SSBP4-202ENST00000348495 A0A0U1RRA0 63 aa17.47■□□□□ 0.39
SSBP4-202ENST00000348495 TLX1NBP0CAT3 122 aa17.47■□□□□ 0.39
SSBP4-202ENST00000348495 LINC00158P58513 81 aa17.46■□□□□ 0.39
SSBP4-202ENST00000348495 KRTAP10-2P60368 255 aa17.46■□□□□ 0.39
SSBP4-202ENST00000348495 DNAH11Q96DT5 4516 aa17.45■□□□□ 0.38
SSBP4-202ENST00000348495 FUSP35637 526 aaKnown RBP eCLIP17.45■□□□□ 0.382e-6■■■□□ 17
SSBP4-202ENST00000348495 NDUFC2-KCTD14E9PQ53 114 aa17.44■□□□□ 0.38
SSBP4-202ENST00000348495 TMEM238C9JI98 176 aa17.44■□□□□ 0.38
SSBP4-202ENST00000348495 IGLV5-52A0A0A0MRZ9 124 aa17.43■□□□□ 0.38
SSBP4-202ENST00000348495 SPANXB1Q9NS25 103 aaPredicted RBP17.43■□□□□ 0.38
SSBP4-202ENST00000348495 MIR7-3HGQ8N6C7 128 aa17.42■□□□□ 0.38
SSBP4-202ENST00000348495 DAND5Q8N907 189 aa17.42■□□□□ 0.38
SSBP4-202ENST00000348495 PKD1P98161 4303 aa17.41■□□□□ 0.38
SSBP4-202ENST00000348495 Q6ZRP5 223 aa17.41■□□□□ 0.38
SSBP4-202ENST00000348495 SPANXDQ9BXN6 97 aa17.41■□□□□ 0.38
SSBP4-202ENST00000348495 PGPEP1Q9NXJ5 209 aa17.41■□□□□ 0.38
SSBP4-202ENST00000348495 SPANXCQ9NY87 97 aa17.41■□□□□ 0.38
SSBP4-202ENST00000348495 LOC107984640A0A0U1RRK4 108 aa17.4■□□□□ 0.38
SSBP4-202ENST00000348495 A0A1B0GVY2 172 aa17.4■□□□□ 0.38
SSBP4-202ENST00000348495 LINC01620Q4KN68 170 aa17.4■□□□□ 0.38
SSBP4-202ENST00000348495 HNRNPA3P51991 378 aaKnown RBP17.39■□□□□ 0.37
SSBP4-202ENST00000348495 SDIM1Q6ZPB5 146 aa17.39■□□□□ 0.37
SSBP4-202ENST00000348495 Q6ZVH6 145 aa17.38■□□□□ 0.37
SSBP4-202ENST00000348495 SND1-IT1Q9HBX3 110 aa17.38■□□□□ 0.37
SSBP4-202ENST00000348495 HECTD4Q9Y4D8 3996 aa17.37■□□□□ 0.37
SSBP4-202ENST00000348495 RPL18AQ02543 176 aaKnown RBP17.36■□□□□ 0.37
SSBP4-202ENST00000348495 SRSF9Q13242 221 aaKnown RBP eCLIP17.35■□□□□ 0.37
SSBP4-202ENST00000348495 PTTG1IPP53801 180 aa17.35■□□□□ 0.37
SSBP4-202ENST00000348495 GAGE2EQ4V326 116 aa17.35■□□□□ 0.37
SSBP4-202ENST00000348495 GAGE2DQ9UEU5 116 aa17.35■□□□□ 0.37
SSBP4-202ENST00000348495 PKIGQ9Y2B9 76 aa17.35■□□□□ 0.37
SSBP4-202ENST00000348495 EIF4EBP3O60516 100 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-202ENST00000348495 SOSTDC1Q6X4U4 206 aa17.34■□□□□ 0.37
SSBP4-202ENST00000348495 DDTP30046 118 aa17.33■□□□□ 0.37
SSBP4-202ENST00000348495 LINC00308Q8TCZ7 52 aa17.33■□□□□ 0.37
SSBP4-202ENST00000348495 HIST1H4GQ99525 98 aa17.33■□□□□ 0.37
SSBP4-202ENST00000348495 A0A096LNI7 61 aa17.33■□□□□ 0.36
SSBP4-202ENST00000348495 LOC107984156A0A0G2JMH3 177 aa17.33■□□□□ 0.36
SSBP4-202ENST00000348495 C16orf90A8MZG2 172 aa17.33■□□□□ 0.36
SSBP4-202ENST00000348495 ARL17AQ8IVW1 177 aa17.33■□□□□ 0.36
SSBP4-202ENST00000348495 XAGE1AQ9HD64 81 aa17.33■□□□□ 0.36
SSBP4-202ENST00000348495 GAGE2BQ13066 116 aa17.32■□□□□ 0.36
SSBP4-202ENST00000348495 TAL2Q16559 108 aa17.32■□□□□ 0.36
SSBP4-202ENST00000348495 IFITM1P13164 125 aa17.31■□□□□ 0.36
SSBP4-202ENST00000348495 GCSHP23434 173 aa17.31■□□□□ 0.36
SSBP4-202ENST00000348495 C9orf129Q5T035 196 aaKnown RBP17.31■□□□□ 0.36
SSBP4-202ENST00000348495 NPC2P61916 151 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms