RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 IFI27P40305 119 aaPredicted RBP8.54□□□□□ -1.04
SIRPB3P-201ENST00000340424 HINT1P49773 126 aaPredicted RBP8.54□□□□□ -1.04
SIRPB3P-201ENST00000340424 UBE2V1Q13404 147 aa8.54□□□□□ -1.04
SIRPB3P-201ENST00000340424 HIGD2BQ4VC39 106 aa8.54□□□□□ -1.04
SIRPB3P-201ENST00000340424 BVES-AS1Q5T3Y7 98 aa8.54□□□□□ -1.04
SIRPB3P-201ENST00000340424 SPANXA1Q9NS26 97 aa8.54□□□□□ -1.04
SIRPB3P-201ENST00000340424 DMBT1Q9UGM3 2413 aaPredicted RBP8.54□□□□□ -1.04
SIRPB3P-201ENST00000340424 NPYP01303 97 aa8.53□□□□□ -1.04
SIRPB3P-201ENST00000340424 XP32Q5T750 250 aa8.53□□□□□ -1.04
SIRPB3P-201ENST00000340424 NXT2Q9NPJ8 142 aaKnown RBP8.53□□□□□ -1.04
SIRPB3P-201ENST00000340424 COX7A2LO14548 114 aa8.52□□□□□ -1.05
SIRPB3P-201ENST00000340424 SEC11AP67812 179 aa8.52□□□□□ -1.05
SIRPB3P-201ENST00000340424 C2orf91Q6ZV80 131 aa8.52□□□□□ -1.05
SIRPB3P-201ENST00000340424 SPACA4Q8TDM5 124 aa8.52□□□□□ -1.05
SIRPB3P-201ENST00000340424 MAP1LC3AQ9H492 121 aa8.52□□□□□ -1.05
SIRPB3P-201ENST00000340424 ZNF561-AS1K7EIQ3 104 aa8.51□□□□□ -1.05
SIRPB3P-201ENST00000340424 TAX1BP3O14907 124 aa8.51□□□□□ -1.05
SIRPB3P-201ENST00000340424 MALP21145 153 aa8.51□□□□□ -1.05
SIRPB3P-201ENST00000340424 KRTAP10-4P60372 401 aaPredicted RBP8.51□□□□□ -1.05
SIRPB3P-201ENST00000340424 RPL37AP61513 92 aaKnown RBP8.51□□□□□ -1.05
SIRPB3P-201ENST00000340424 MRPS36P82909 103 aaKnown RBP8.51□□□□□ -1.05
SIRPB3P-201ENST00000340424 Q6ZUT4 128 aa8.51□□□□□ -1.05
SIRPB3P-201ENST00000340424 BOD1L2Q8IYS8 172 aa8.51□□□□□ -1.05
SIRPB3P-201ENST00000340424 DPH3Q96FX2 82 aa8.51□□□□□ -1.05
SIRPB3P-201ENST00000340424 LINC00474Q9P2X8 69 aa8.51□□□□□ -1.05
SIRPB3P-201ENST00000340424 FLG2Q5D862 2391 aaPredicted RBP8.51□□□□□ -1.05
SIRPB3P-201ENST00000340424 TRAV13-1A0A0B4J241 112 aa8.5□□□□□ -1.05
SIRPB3P-201ENST00000340424 PANO1I0J062 215 aa8.5□□□□□ -1.05
SIRPB3P-201ENST00000340424 COX6A2Q02221 97 aa8.5□□□□□ -1.05
SIRPB3P-201ENST00000340424 IFI27L1Q96BM0 104 aa8.5□□□□□ -1.05
SIRPB3P-201ENST00000340424 K7EMI3 77 aa8.49□□□□□ -1.05
SIRPB3P-201ENST00000340424 APOMO95445 188 aa8.49□□□□□ -1.05
SIRPB3P-201ENST00000340424 RPL39P62891 51 aaKnown RBP8.49□□□□□ -1.05
SIRPB3P-201ENST00000340424 Q8N8P6 123 aa8.49□□□□□ -1.05
SIRPB3P-201ENST00000340424 CARD19Q96LW7 228 aa8.49□□□□□ -1.05
SIRPB3P-201ENST00000340424 PLAC8Q9NZF1 115 aa8.49□□□□□ -1.05
SIRPB3P-201ENST00000340424 A0A087WYN8 130 aa8.48□□□□□ -1.05
SIRPB3P-201ENST00000340424 LOC100996750A0A140TA64 210 aa8.48□□□□□ -1.05
SIRPB3P-201ENST00000340424 KRTAP29-1A8MX34 341 aaPredicted RBP8.48□□□□□ -1.05
SIRPB3P-201ENST00000340424 PTTG1IPP53801 180 aa8.48□□□□□ -1.05
SIRPB3P-201ENST00000340424 RNASE13Q5GAN3 156 aaKnown RBP8.48□□□□□ -1.05
SIRPB3P-201ENST00000340424 KRTAP4-6Q9BYQ5 205 aa8.48□□□□□ -1.05
SIRPB3P-201ENST00000340424 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
SIRPB3P-201ENST00000340424 ATP5LO75964 103 aa8.47□□□□□ -1.05
SIRPB3P-201ENST00000340424 CHTF8P0CG12 524 aa8.47□□□□□ -1.05
SIRPB3P-201ENST00000340424 HSD52Q0P140 79 aa8.47□□□□□ -1.05
SIRPB3P-201ENST00000340424 SYCNQ0VAF6 134 aa8.47□□□□□ -1.05
SIRPB3P-201ENST00000340424 HIGD1BQ9P298 99 aa8.47□□□□□ -1.05
SIRPB3P-201ENST00000340424 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
SIRPB3P-201ENST00000340424 PKHD1L1Q86WI1 4243 aa8.46□□□□□ -1.05
SIRPB3P-201ENST00000340424 LOC389332A0A1B0GUA5 103 aa8.46□□□□□ -1.06
SIRPB3P-201ENST00000340424 F8WDY8 70 aa8.46□□□□□ -1.06
SIRPB3P-201ENST00000340424 ORMDL2Q53FV1 153 aa8.46□□□□□ -1.06
SIRPB3P-201ENST00000340424 C7orf33Q8WU49 177 aa8.46□□□□□ -1.06
SIRPB3P-201ENST00000340424 C2orf48Q96LS8 159 aa8.46□□□□□ -1.06
SIRPB3P-201ENST00000340424 CDIP1Q9H305 208 aa8.46□□□□□ -1.06
SIRPB3P-201ENST00000340424 IGLV4-69A0A075B6H9 119 aa8.45□□□□□ -1.06
SIRPB3P-201ENST00000340424 IGKV2-24A0A0C4DH68 120 aa8.45□□□□□ -1.06
SIRPB3P-201ENST00000340424 ODF1Q14990 250 aa8.45□□□□□ -1.06
SIRPB3P-201ENST00000340424 FAM104AQ969W3 186 aa8.45□□□□□ -1.06
SIRPB3P-201ENST00000340424 CBY1Q9Y3M2 126 aa8.45□□□□□ -1.06
SIRPB3P-201ENST00000340424 LRP1Q07954 4544 aaKnown RBP8.45□□□□□ -1.06
SIRPB3P-201ENST00000340424 IGHV3OR16-9A0A0B4J2B5 98 aa8.44□□□□□ -1.06
SIRPB3P-201ENST00000340424 H3BRM9 83 aa8.44□□□□□ -1.06
SIRPB3P-201ENST00000340424 OXTP01178 125 aa8.44□□□□□ -1.06
SIRPB3P-201ENST00000340424 C5orf38Q86SI9 138 aa8.44□□□□□ -1.06
SIRPB3P-201ENST00000340424 TMEM141Q96I45 108 aa8.44□□□□□ -1.06
SIRPB3P-201ENST00000340424 CAMK2N2Q96S95 79 aa8.44□□□□□ -1.06
SIRPB3P-201ENST00000340424 TP73-AS1Q9UF72 201 aa8.44□□□□□ -1.06
SIRPB3P-201ENST00000340424 CYSLTR1Q9Y271 337 aa8.44□□□□□ -1.06
SIRPB3P-201ENST00000340424 A0A096LNI7 61 aa8.43□□□□□ -1.06
SIRPB3P-201ENST00000340424 A6NDN8 102 aa8.43□□□□□ -1.06
SIRPB3P-201ENST00000340424 SPAG11BQ08648 103 aa8.43□□□□□ -1.06
SIRPB3P-201ENST00000340424 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
SIRPB3P-201ENST00000340424 IGLV4-3A0A075B6K6 122 aa8.42□□□□□ -1.06
SIRPB3P-201ENST00000340424 TRAV12-1A0A0B4J245 112 aa8.42□□□□□ -1.06
SIRPB3P-201ENST00000340424 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
SIRPB3P-201ENST00000340424 H0Y8G0 127 aa8.42□□□□□ -1.06
SIRPB3P-201ENST00000340424 VAMP3Q15836 100 aa8.42□□□□□ -1.06
SIRPB3P-201ENST00000340424 RNF151Q2KHN1 245 aa8.42□□□□□ -1.06
SIRPB3P-201ENST00000340424 C2orf66Q6UXQ4 117 aa8.42□□□□□ -1.06
SIRPB3P-201ENST00000340424 Q6ZRU5 148 aa8.42□□□□□ -1.06
SIRPB3P-201ENST00000340424 OPRPNQ99935 248 aaPredicted RBP8.42□□□□□ -1.06
SIRPB3P-201ENST00000340424 DPM2O94777 84 aa8.41□□□□□ -1.06
SIRPB3P-201ENST00000340424 PAPPA-AS1Q5QFB9 102 aa8.41□□□□□ -1.06
SIRPB3P-201ENST00000340424 Q6ZVH6 145 aa8.41□□□□□ -1.06
SIRPB3P-201ENST00000340424 A0A087WZ39 114 aa8.4□□□□□ -1.06
SIRPB3P-201ENST00000340424 C9orf118A6NHY6 69 aa8.4□□□□□ -1.06
SIRPB3P-201ENST00000340424 LINC01549A6NIU2 74 aa8.4□□□□□ -1.06
SIRPB3P-201ENST00000340424 IGKCP01834 107 aa8.4□□□□□ -1.06
SIRPB3P-201ENST00000340424 TAL2Q16559 108 aa8.39□□□□□ -1.07
SIRPB3P-201ENST00000340424 LINC00242Q5T6M2 205 aa8.39□□□□□ -1.07
SIRPB3P-201ENST00000340424 LINC01561Q8N1V8 128 aa8.39□□□□□ -1.07
SIRPB3P-201ENST00000340424 MRPL35Q9NZE8 188 aaKnown RBP8.39□□□□□ -1.07
SIRPB3P-201ENST00000340424 NDUFA1O15239 70 aa8.38□□□□□ -1.07
SIRPB3P-201ENST00000340424 PLNP26678 52 aa8.38□□□□□ -1.07
SIRPB3P-201ENST00000340424 UBE2D1P51668 147 aa8.38□□□□□ -1.07
SIRPB3P-201ENST00000340424 AMELXQ99217 191 aa8.38□□□□□ -1.07
SIRPB3P-201ENST00000340424 VCX2Q9H322 139 aa8.38□□□□□ -1.07
SIRPB3P-201ENST00000340424 IGIPA6NJ69 53 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms