RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CXCL6P80162 114 aa9.43□□□□□ -0.9
USP47-202ENST00000339865 DEFB114Q30KQ6 69 aa9.43□□□□□ -0.9
USP47-202ENST00000339865 IGLV1-47P01700 117 aa9.43□□□□□ -0.9
USP47-202ENST00000339865 Q6ZSV7 163 aa9.42□□□□□ -0.9
USP47-202ENST00000339865 PRM2P04554 102 aa9.42□□□□□ -0.9
USP47-202ENST00000339865 C1orf64Q8NEQ6 169 aa9.42□□□□□ -0.9
USP47-202ENST00000339865 CYSRT1A8MQ03 144 aa9.42□□□□□ -0.9
USP47-202ENST00000339865 ATP11AUNQ6ZP68 121 aa9.42□□□□□ -0.9
USP47-202ENST00000339865 K7EQG2 157 aa9.41□□□□□ -0.9
USP47-202ENST00000339865 RPL28P46779 137 aaKnown RBP9.41□□□□□ -0.9
USP47-202ENST00000339865 ADORA2A-AS1P86434 159 aa9.41□□□□□ -0.9
USP47-202ENST00000339865 MSMPQ1L6U9 139 aa9.41□□□□□ -0.9
USP47-202ENST00000339865 LINC01556Q5JQF7 62 aa9.41□□□□□ -0.9
USP47-202ENST00000339865 SMR3AQ99954 134 aa9.41□□□□□ -0.9
USP47-202ENST00000339865 JMJD1CQ15652 2540 aa9.41□□□□□ -0.9
USP47-202ENST00000339865 SSBP3-AS1Q7Z2R9 100 aa9.4□□□□□ -0.9
USP47-202ENST00000339865 PRORYQ9H606 182 aa9.4□□□□□ -0.9
USP47-202ENST00000339865 C1orf134Q5TEV5 83 aa9.4□□□□□ -0.91
USP47-202ENST00000339865 LELP1Q5T871 98 aa9.39□□□□□ -0.91
USP47-202ENST00000339865 TRBV10-3A0A0K0K1G6 114 aa9.39□□□□□ -0.91
USP47-202ENST00000339865 Q8IZM0 81 aa9.39□□□□□ -0.91
USP47-202ENST00000339865 Q9BRP9 147 aa9.39□□□□□ -0.91
USP47-202ENST00000339865 GOLGB1Q14789 3259 aaKnown RBP9.38□□□□□ -0.91
USP47-202ENST00000339865 A0A087WSZ3 146 aa9.38□□□□□ -0.91
USP47-202ENST00000339865 FHL2Q14192 279 aa9.38□□□□□ -0.91
USP47-202ENST00000339865 PCSK5Q92824 1860 aa9.37□□□□□ -0.91
USP47-202ENST00000339865 ACYP2P14621 99 aa9.37□□□□□ -0.91
USP47-202ENST00000339865 UNQ6190/PRO20217Q6UXQ8 127 aa9.37□□□□□ -0.91
USP47-202ENST00000339865 U3KQA8 63 aa9.36□□□□□ -0.91
USP47-202ENST00000339865 KRTAP27-1Q3LI81 207 aa9.36□□□□□ -0.91
USP47-202ENST00000339865 C6orf223Q8N319 242 aa9.35□□□□□ -0.91
USP47-202ENST00000339865 CDC42SE2Q9NRR3 84 aa9.34□□□□□ -0.91
USP47-202ENST00000339865 NCOR2Q9Y618 2525 aa9.34□□□□□ -0.91
USP47-202ENST00000339865 A8MTW9 85 aa9.34□□□□□ -0.91
USP47-202ENST00000339865 COX6A2Q02221 97 aa9.34□□□□□ -0.91
USP47-202ENST00000339865 GAS8-AS1O95177 125 aa9.33□□□□□ -0.92
USP47-202ENST00000339865 Q6ZTC4 211 aa9.33□□□□□ -0.92
USP47-202ENST00000339865 C11orf1Q9H5F2 150 aa9.33□□□□□ -0.92
USP47-202ENST00000339865 LINC00846Q9NV44 126 aa9.33□□□□□ -0.92
USP47-202ENST00000339865 MTORP42345 2549 aa9.31□□□□□ -0.92
USP47-202ENST00000339865 MUC7Q8TAX7 377 aa9.31□□□□□ -0.92
USP47-202ENST00000339865 FSTL3O95633 263 aa9.3□□□□□ -0.92
USP47-202ENST00000339865 SMIM29Q86T20 159 aa9.3□□□□□ -0.92
USP47-202ENST00000339865 C16orf90A8MZG2 172 aa9.3□□□□□ -0.92
USP47-202ENST00000339865 C2orf48Q96LS8 159 aa9.3□□□□□ -0.92
USP47-202ENST00000339865 C6orf48Q9UBA6 75 aa9.3□□□□□ -0.92
USP47-202ENST00000339865 BRI3O95415 125 aa9.29□□□□□ -0.92
USP47-202ENST00000339865 SPACA4Q8TDM5 124 aa9.28□□□□□ -0.92
USP47-202ENST00000339865 ZNF702PQ9H963 129 aa9.28□□□□□ -0.92
USP47-202ENST00000339865 POLR2KP53803 58 aaKnown RBP9.28□□□□□ -0.92
USP47-202ENST00000339865 USP24Q9UPU5 2620 aa9.28□□□□□ -0.92
USP47-202ENST00000339865 PIP4P1Q86T03 277 aa9.28□□□□□ -0.92
USP47-202ENST00000339865 ODF3BA8MYP8 253 aa9.27□□□□□ -0.92
USP47-202ENST00000339865 ADAMTSL4-AS1Q5T5F5 129 aa9.27□□□□□ -0.92
USP47-202ENST00000339865 COL27A1Q8IZC6 1860 aaPredicted RBP9.27□□□□□ -0.93
USP47-202ENST00000339865 IGIPA6NJ69 53 aa9.27□□□□□ -0.93
USP47-202ENST00000339865 C10orf99Q6UWK7 81 aa9.26□□□□□ -0.93
USP47-202ENST00000339865 Q6YL49 198 aa9.26□□□□□ -0.93
USP47-202ENST00000339865 PRR9Q5T870 116 aa9.26□□□□□ -0.93
USP47-202ENST00000339865 LINC00242Q5T6M2 205 aa9.26□□□□□ -0.93
USP47-202ENST00000339865 USP9XQ93008 2570 aaPredicted RBP9.26□□□□□ -0.93
USP47-202ENST00000339865 MRGPRG-AS1Q2M3A8 158 aa9.26□□□□□ -0.93
USP47-202ENST00000339865 P0C879 139 aa9.26□□□□□ -0.93
USP47-202ENST00000339865 NAV2Q8IVL1 2488 aa9.25□□□□□ -0.93
USP47-202ENST00000339865 SMIM1B2RUZ4 78 aa9.25□□□□□ -0.93
USP47-202ENST00000339865 CENPFP49454 3210 aa9.25□□□□□ -0.93
USP47-202ENST00000339865 EGFEM1PQ0D2K5 195 aa9.25□□□□□ -0.93
USP47-202ENST00000339865 THSD7BQ9C0I4 1608 aa9.24□□□□□ -0.93
USP47-202ENST00000339865 TSPEAR-AS2P59090 65 aa9.23□□□□□ -0.93
USP47-202ENST00000339865 ANKRD17O75179 2603 aaKnown RBP9.23□□□□□ -0.93
USP47-202ENST00000339865 PRRC2CQ9Y520 2896 aaKnown RBP9.23□□□□□ -0.93
USP47-202ENST00000339865 PLA2G2CQ5R387 149 aa9.22□□□□□ -0.93
USP47-202ENST00000339865 C18orf65Q6ZTR6 163 aa9.22□□□□□ -0.93
USP47-202ENST00000339865 ZNF295-AS1Q8N0V1 137 aa9.22□□□□□ -0.93
USP47-202ENST00000339865 C11orf21Q9P2W6 132 aa9.21□□□□□ -0.93
USP47-202ENST00000339865 KLLNB2CW77 178 aa9.21□□□□□ -0.93
USP47-202ENST00000339865 ZNF580Q9UK33 172 aa9.21□□□□□ -0.93
USP47-202ENST00000339865 BRWD1-AS2P59051 145 aa9.2□□□□□ -0.94
USP47-202ENST00000339865 IGLV4-60A0A075B6I1 120 aa9.2□□□□□ -0.94
USP47-202ENST00000339865 TP53AIP1Q9HCN2 124 aa9.2□□□□□ -0.94
USP47-202ENST00000339865 RPS28P62857 69 aaKnown RBP9.2□□□□□ -0.94
USP47-202ENST00000339865 IGFL2Q6UWQ7 119 aa9.2□□□□□ -0.94
USP47-202ENST00000339865 C1orf229Q6ZS94 237 aaPredicted RBP9.2□□□□□ -0.94
USP47-202ENST00000339865 LMO4P61968 165 aa9.19□□□□□ -0.94
USP47-202ENST00000339865 CRIPTQ9P021 101 aa9.19□□□□□ -0.94
USP47-202ENST00000339865 CDIP1Q9H305 208 aa9.19□□□□□ -0.94
USP47-202ENST00000339865 C19orf84I3L1E1 186 aa9.19□□□□□ -0.94
USP47-202ENST00000339865 KIAA0087Q14695 138 aa9.16□□□□□ -0.94
USP47-202ENST00000339865 CNFNQ9BYD5 112 aa9.15□□□□□ -0.94
USP47-202ENST00000339865 EIF4EBP1Q13541 118 aaPredicted RBP9.15□□□□□ -0.94
USP47-202ENST00000339865 LINC01600Q96MT4 127 aa9.15□□□□□ -0.95
USP47-202ENST00000339865 LINC00574Q9H8X3 128 aa9.15□□□□□ -0.95
USP47-202ENST00000339865 MOBPQ13875 183 aa9.14□□□□□ -0.95
USP47-202ENST00000339865 EDN2P20800 178 aa9.14□□□□□ -0.95
USP47-202ENST00000339865 Q6ZPA2 131 aa9.14□□□□□ -0.95
USP47-202ENST00000339865 M0R2T5 61 aa9.14□□□□□ -0.95
USP47-202ENST00000339865 APLNQ9ULZ1 77 aa9.14□□□□□ -0.95
USP47-202ENST00000339865 LINC01006Q8NI28 216 aa9.13□□□□□ -0.95
USP47-202ENST00000339865 CHCHD7Q9BUK0 85 aa9.13□□□□□ -0.95
USP47-202ENST00000339865 UTRNP46939 3433 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms