RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 C9orf163Q8N9P6 203 aa9.62□□□□□ -0.87
MUC1-202ENST00000338684 MRPL35Q9NZE8 188 aaKnown RBP9.62□□□□□ -0.87
MUC1-202ENST00000338684 HMCN2Q8NDA2 5059 aa9.62□□□□□ -0.87
MUC1-202ENST00000338684 C11orf86A6NJI1 115 aa9.61□□□□□ -0.87
MUC1-202ENST00000338684 SLPIP03973 132 aa9.61□□□□□ -0.87
MUC1-202ENST00000338684 PRSS2P07478 247 aa9.61□□□□□ -0.87
MUC1-202ENST00000338684 ZNF22P17026 224 aaPredicted RBP9.61□□□□□ -0.87
MUC1-202ENST00000338684 SYCNQ0VAF6 134 aa9.61□□□□□ -0.87
MUC1-202ENST00000338684 LINC00526Q96FQ7 95 aa9.61□□□□□ -0.87
MUC1-202ENST00000338684 CAMK2N2Q96S95 79 aa9.61□□□□□ -0.87
MUC1-202ENST00000338684 LRP1Q07954 4544 aaKnown RBP9.6□□□□□ -0.87
MUC1-202ENST00000338684 SMIM1B2RUZ4 78 aa9.6□□□□□ -0.87
MUC1-202ENST00000338684 TMEM170BQ5T4T1 132 aa9.6□□□□□ -0.87
MUC1-202ENST00000338684 Q8IZM0 81 aa9.6□□□□□ -0.87
MUC1-202ENST00000338684 CIRBP-AS1Q8TBR5 109 aa9.6□□□□□ -0.87
MUC1-202ENST00000338684 CARD19Q96LW7 228 aa9.6□□□□□ -0.87
MUC1-202ENST00000338684 SYS1-DBNDD2H3BUS1 97 aa9.59□□□□□ -0.87
MUC1-202ENST00000338684 NDUFA1O15239 70 aa9.59□□□□□ -0.87
MUC1-202ENST00000338684 SPINK8P0C7L1 97 aa9.59□□□□□ -0.87
MUC1-202ENST00000338684 PLNP26678 52 aa9.59□□□□□ -0.87
MUC1-202ENST00000338684 S100A2P29034 98 aa9.59□□□□□ -0.87
MUC1-202ENST00000338684 KIAA0087Q14695 138 aa9.59□□□□□ -0.87
MUC1-202ENST00000338684 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
MUC1-202ENST00000338684 UBR4Q5T4S7 5183 aa9.59□□□□□ -0.87
MUC1-202ENST00000338684 C6orf226Q5I0X4 101 aa9.58□□□□□ -0.88
MUC1-202ENST00000338684 PET117Q6UWS5 81 aa9.58□□□□□ -0.88
MUC1-202ENST00000338684 HIST3H2BBQ8N257 126 aa9.58□□□□□ -0.88
MUC1-202ENST00000338684 PKIGQ9Y2B9 76 aa9.58□□□□□ -0.88
MUC1-202ENST00000338684 DPM2O94777 84 aa9.57□□□□□ -0.88
MUC1-202ENST00000338684 CKS1BP61024 79 aa9.57□□□□□ -0.88
MUC1-202ENST00000338684 COX7B2Q8TF08 81 aa9.57□□□□□ -0.88
MUC1-202ENST00000338684 IGLV5-39A0A0G2JS06 123 aa9.56□□□□□ -0.88
MUC1-202ENST00000338684 C3orf79P0CE67 100 aa9.56□□□□□ -0.88
MUC1-202ENST00000338684 CXCL5P42830 114 aa9.56□□□□□ -0.88
MUC1-202ENST00000338684 SNRPEP62304 92 aaKnown RBP9.56□□□□□ -0.88
MUC1-202ENST00000338684 RNF151Q2KHN1 245 aa9.56□□□□□ -0.88
MUC1-202ENST00000338684 Q6ZRU5 148 aa9.56□□□□□ -0.88
MUC1-202ENST00000338684 TMEM223A0PJW6 202 aa9.55□□□□□ -0.88
MUC1-202ENST00000338684 IGKCP01834 107 aa9.55□□□□□ -0.88
MUC1-202ENST00000338684 KRTDAPP60985 99 aa9.55□□□□□ -0.88
MUC1-202ENST00000338684 SDIM1Q6ZPB5 146 aa9.55□□□□□ -0.88
MUC1-202ENST00000338684 FAT3Q8TDW7 4589 aa9.54□□□□□ -0.88
MUC1-202ENST00000338684 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
MUC1-202ENST00000338684 C5orf52A6NGY3 159 aa9.54□□□□□ -0.88
MUC1-202ENST00000338684 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
MUC1-202ENST00000338684 C2orf82Q6UX34 121 aa9.54□□□□□ -0.88
MUC1-202ENST00000338684 UNQ6190/PRO20217Q6UXQ8 127 aa9.54□□□□□ -0.88
MUC1-202ENST00000338684 HIST1H2BLQ99880 126 aa9.54□□□□□ -0.88
MUC1-202ENST00000338684 PMCHL2Q9BQD1 86 aa9.54□□□□□ -0.88
MUC1-202ENST00000338684 C20orf202A1L168 122 aa9.53□□□□□ -0.88
MUC1-202ENST00000338684 LOC107984640A0A0U1RRK4 108 aa9.52□□□□□ -0.89
MUC1-202ENST00000338684 C10orf25Q5T742 122 aa9.52□□□□□ -0.89
MUC1-202ENST00000338684 AKR1D1P51857 326 aa9.51□□□□□ -0.89
MUC1-202ENST00000338684 HNRNPA3P51991 378 aaKnown RBP9.51□□□□□ -0.89
MUC1-202ENST00000338684 HERVK_113P61574 105 aa9.51□□□□□ -0.89
MUC1-202ENST00000338684 SFTA2Q6UW10 78 aa9.51□□□□□ -0.89
MUC1-202ENST00000338684 C6orf48Q9UBA6 75 aa9.51□□□□□ -0.89
MUC1-202ENST00000338684 PANO1I0J062 215 aa9.49□□□□□ -0.89
MUC1-202ENST00000338684 OXTP01178 125 aa9.49□□□□□ -0.89
MUC1-202ENST00000338684 LINC00474Q9P2X8 69 aa9.49□□□□□ -0.89
MUC1-202ENST00000338684 PKHD1L1Q86WI1 4243 aa9.49□□□□□ -0.89
MUC1-202ENST00000338684 TLX1NBP0CAT3 122 aa9.48□□□□□ -0.89
MUC1-202ENST00000338684 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
MUC1-202ENST00000338684 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.48□□□□□ -0.89
MUC1-202ENST00000338684 A0A096LNI7 61 aa9.47□□□□□ -0.89
MUC1-202ENST00000338684 LEPROTO15243 131 aa9.47□□□□□ -0.89
MUC1-202ENST00000338684 RPL18AQ02543 176 aaKnown RBP9.47□□□□□ -0.89
MUC1-202ENST00000338684 CIRBPQ14011 172 aaKnown RBP9.47□□□□□ -0.89
MUC1-202ENST00000338684 SERTAD4-AS1Q5TG53 156 aa9.47□□□□□ -0.89
MUC1-202ENST00000338684 IGKV2-24A0A0C4DH68 120 aa9.46□□□□□ -0.9
MUC1-202ENST00000338684 NDUFC2-KCTD14E9PQ53 114 aa9.46□□□□□ -0.9
MUC1-202ENST00000338684 PTTG1IPP53801 180 aa9.46□□□□□ -0.9
MUC1-202ENST00000338684 RPL37AP61513 92 aaKnown RBP9.46□□□□□ -0.9
MUC1-202ENST00000338684 GAGE2BQ13066 116 aa9.46□□□□□ -0.9
MUC1-202ENST00000338684 C9orf116Q5BN46 136 aaPredicted RBP9.46□□□□□ -0.9
MUC1-202ENST00000338684 DPH3Q96FX2 82 aa9.46□□□□□ -0.9
MUC1-202ENST00000338684 CHTF8P0CG12 524 aa9.45□□□□□ -0.9
MUC1-202ENST00000338684 SPACA4Q8TDM5 124 aa9.45□□□□□ -0.9
MUC1-202ENST00000338684 TMA7Q9Y2S6 64 aaKnown RBP9.45□□□□□ -0.9
MUC1-202ENST00000338684 E9PLD3 99 aa9.44□□□□□ -0.9
MUC1-202ENST00000338684 J3QQQ9 107 aa9.44□□□□□ -0.9
MUC1-202ENST00000338684 MAJINQ3KP22 176 aa9.44□□□□□ -0.9
MUC1-202ENST00000338684 ZNF625Q96I27 306 aaPredicted RBP9.44□□□□□ -0.9
MUC1-202ENST00000338684 MYMXA0A1B0GTQ4 84 aa9.43□□□□□ -0.9
MUC1-202ENST00000338684 LGALS3P17931 250 aaKnown RBP9.43□□□□□ -0.9
MUC1-202ENST00000338684 Q6ZRP5 223 aa9.43□□□□□ -0.9
MUC1-202ENST00000338684 NDUFA12Q9UI09 145 aa9.43□□□□□ -0.9
MUC1-202ENST00000338684 NMUP48645 174 aa9.42□□□□□ -0.9
MUC1-202ENST00000338684 HERV-K104P63124 156 aa9.42□□□□□ -0.9
MUC1-202ENST00000338684 COX17Q14061 63 aa9.42□□□□□ -0.9
MUC1-202ENST00000338684 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
MUC1-202ENST00000338684 STPG4Q8N801 248 aa9.42□□□□□ -0.9
MUC1-202ENST00000338684 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
MUC1-202ENST00000338684 ERG28Q9UKR5 140 aa9.42□□□□□ -0.9
MUC1-202ENST00000338684 A0A087WYN8 130 aa9.41□□□□□ -0.9
MUC1-202ENST00000338684 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
MUC1-202ENST00000338684 LINC00587B1AMM8 73 aa9.4□□□□□ -0.9
MUC1-202ENST00000338684 SCGB1D1O95968 90 aa9.4□□□□□ -0.9
MUC1-202ENST00000338684 ATOH7Q8N100 152 aa9.4□□□□□ -0.9
MUC1-202ENST00000338684 PLAC8Q9NZF1 115 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms