RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 HCG22E2RYF7 251 aa8.5□□□□□ -1.05
SHANK2-201ENST00000338508 SERTAD4-AS1Q5TG53 156 aa8.5□□□□□ -1.05
SHANK2-201ENST00000338508 Q8N814 137 aa8.5□□□□□ -1.05
SHANK2-201ENST00000338508 ADAMTS20P59510 1910 aa8.5□□□□□ -1.05
SHANK2-201ENST00000338508 IGLV4-60A0A075B6I1 120 aa8.5□□□□□ -1.05
SHANK2-201ENST00000338508 ANKHD1Q8IWZ3 2542 aaKnown RBP8.5□□□□□ -1.05
SHANK2-201ENST00000338508 TTC28Q96AY4 2481 aa8.49□□□□□ -1.05
SHANK2-201ENST00000338508 Q6ZPA2 131 aa8.49□□□□□ -1.05
SHANK2-201ENST00000338508 C11orf1Q9H5F2 150 aa8.49□□□□□ -1.05
SHANK2-201ENST00000338508 C2CD3Q4AC94 2353 aa8.49□□□□□ -1.05
SHANK2-201ENST00000338508 KRTAP10-9P60411 292 aa8.48□□□□□ -1.05
SHANK2-201ENST00000338508 P0C879 139 aa8.48□□□□□ -1.05
SHANK2-201ENST00000338508 TRBV7-7A0A0K0K1E9 115 aa8.48□□□□□ -1.05
SHANK2-201ENST00000338508 MRPS36P82909 103 aaKnown RBP8.47□□□□□ -1.05
SHANK2-201ENST00000338508 CDSNQ15517 529 aa8.47□□□□□ -1.05
SHANK2-201ENST00000338508 CSDC2Q9Y534 153 aaKnown RBP8.47□□□□□ -1.05
SHANK2-201ENST00000338508 AVPP01185 164 aa8.47□□□□□ -1.05
SHANK2-201ENST00000338508 TRAV7A0A075B6U4 112 aa8.46□□□□□ -1.06
SHANK2-201ENST00000338508 LINC00574Q9H8X3 128 aa8.46□□□□□ -1.06
SHANK2-201ENST00000338508 IGLV8-61A0A075B6I0 122 aa8.46□□□□□ -1.06
SHANK2-201ENST00000338508 KLLNB2CW77 178 aa8.45□□□□□ -1.06
SHANK2-201ENST00000338508 PTPRBP23467 1997 aa8.45□□□□□ -1.06
SHANK2-201ENST00000338508 EGFEM1PQ0D2K5 195 aa8.45□□□□□ -1.06
SHANK2-201ENST00000338508 ZNF295-AS1Q8N0V1 137 aa8.45□□□□□ -1.06
SHANK2-201ENST00000338508 COL4A4P53420 1690 aaPredicted RBP8.44□□□□□ -1.06
SHANK2-201ENST00000338508 SMIM26A0A096LP01 95 aa8.44□□□□□ -1.06
SHANK2-201ENST00000338508 LINC00242Q5T6M2 205 aa8.44□□□□□ -1.06
SHANK2-201ENST00000338508 C2orf91Q6ZV80 131 aa8.44□□□□□ -1.06
SHANK2-201ENST00000338508 FSTL3O95633 263 aa8.44□□□□□ -1.06
SHANK2-201ENST00000338508 Q6JHZ5 121 aa8.44□□□□□ -1.06
SHANK2-201ENST00000338508 Q8N3U1 123 aa8.44□□□□□ -1.06
SHANK2-201ENST00000338508 IMUPQ9GZP8 106 aa8.44□□□□□ -1.06
SHANK2-201ENST00000338508 IGLV1-40P01703 118 aa8.43□□□□□ -1.06
SHANK2-201ENST00000338508 CPAMD8Q8IZJ3 1885 aa8.43□□□□□ -1.06
SHANK2-201ENST00000338508 POLR2KP53803 58 aaKnown RBP8.42□□□□□ -1.06
SHANK2-201ENST00000338508 hDV103S1A0JD37 113 aa8.42□□□□□ -1.06
SHANK2-201ENST00000338508 ODF3L2Q3SX64 289 aa8.42□□□□□ -1.06
SHANK2-201ENST00000338508 EIF4EBP1Q13541 118 aaPredicted RBP8.42□□□□□ -1.06
SHANK2-201ENST00000338508 LIMD2Q9BT23 127 aa8.42□□□□□ -1.06
SHANK2-201ENST00000338508 ZNF580Q9UK33 172 aa8.42□□□□□ -1.06
SHANK2-201ENST00000338508 FHL2Q14192 279 aa8.41□□□□□ -1.06
SHANK2-201ENST00000338508 SMIM1B2RUZ4 78 aa8.4□□□□□ -1.06
SHANK2-201ENST00000338508 LRRK2Q5S007 2527 aa8.4□□□□□ -1.06
SHANK2-201ENST00000338508 MOBPQ13875 183 aa8.4□□□□□ -1.07
SHANK2-201ENST00000338508 PIEZO2Q9H5I5 2752 aa8.39□□□□□ -1.07
SHANK2-201ENST00000338508 CHTF8P0CG12 524 aa8.39□□□□□ -1.07
SHANK2-201ENST00000338508 Q6ZRU5 148 aa8.39□□□□□ -1.07
SHANK2-201ENST00000338508 MYO9AB2RTY4 2548 aa8.39□□□□□ -1.07
SHANK2-201ENST00000338508 C1orf64Q8NEQ6 169 aa8.38□□□□□ -1.07
SHANK2-201ENST00000338508 SMCR5Q8TEV8 140 aa8.38□□□□□ -1.07
SHANK2-201ENST00000338508 LYPD5Q6UWN5 251 aa8.38□□□□□ -1.07
SHANK2-201ENST00000338508 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
SHANK2-201ENST00000338508 CHCHD7Q9BUK0 85 aa8.38□□□□□ -1.07
SHANK2-201ENST00000338508 Q6ZSN1 163 aa8.38□□□□□ -1.07
SHANK2-201ENST00000338508 A0A1B0GU69 56 aa8.38□□□□□ -1.07
SHANK2-201ENST00000338508 Q8N6K4 173 aa8.38□□□□□ -1.07
SHANK2-201ENST00000338508 IGIPA6NJ69 53 aa8.37□□□□□ -1.07
SHANK2-201ENST00000338508 ZFYVE26Q68DK2 2539 aa8.36□□□□□ -1.07
SHANK2-201ENST00000338508 TSPEAR-AS2P59090 65 aa8.36□□□□□ -1.07
SHANK2-201ENST00000338508 SPAG11AQ6PDA7 123 aa8.36□□□□□ -1.07
SHANK2-201ENST00000338508 SPINT4Q6UDR6 99 aa8.36□□□□□ -1.07
SHANK2-201ENST00000338508 MDFIQ99750 246 aa8.36□□□□□ -1.07
SHANK2-201ENST00000338508 C22orf24Q9Y442 160 aa8.36□□□□□ -1.07
SHANK2-201ENST00000338508 IGLV1-51P01701 117 aa8.35□□□□□ -1.07
SHANK2-201ENST00000338508 LTBP2Q14767 1821 aa8.34□□□□□ -1.07
SHANK2-201ENST00000338508 CRIP3Q6Q6R5 217 aa8.34□□□□□ -1.07
SHANK2-201ENST00000338508 FAM229AH3BQW9 127 aa8.33□□□□□ -1.08
SHANK2-201ENST00000338508 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
SHANK2-201ENST00000338508 SMIM29Q86T20 159 aa8.33□□□□□ -1.08
SHANK2-201ENST00000338508 MUC7Q8TAX7 377 aa8.32□□□□□ -1.08
SHANK2-201ENST00000338508 J3QL48 77 aa8.31□□□□□ -1.08
SHANK2-201ENST00000338508 FHL3Q13643 280 aa8.31□□□□□ -1.08
SHANK2-201ENST00000338508 WDR87Q6ZQQ6 2873 aa8.3□□□□□ -1.08
SHANK2-201ENST00000338508 C16orf90A8MZG2 172 aa8.29□□□□□ -1.08
SHANK2-201ENST00000338508 FN1P02751 2386 aaKnown RBP8.29□□□□□ -1.08
SHANK2-201ENST00000338508 TYMSOSQ8TAI1 123 aa8.29□□□□□ -1.08
SHANK2-201ENST00000338508 ACYP2P14621 99 aa8.29□□□□□ -1.08
SHANK2-201ENST00000338508 TMEM254Q8TBM7 123 aa8.29□□□□□ -1.08
SHANK2-201ENST00000338508 PRO3102Q9H379 93 aa8.29□□□□□ -1.08
SHANK2-201ENST00000338508 TLN1Q9Y490 2541 aaKnown RBP8.29□□□□□ -1.08
SHANK2-201ENST00000338508 PHF5AQ7RTV0 110 aaKnown RBP8.28□□□□□ -1.08
SHANK2-201ENST00000338508 NAV2Q8IVL1 2488 aa8.27□□□□□ -1.09
SHANK2-201ENST00000338508 LINC00846Q9NV44 126 aa8.27□□□□□ -1.09
SHANK2-201ENST00000338508 C6orf48Q9UBA6 75 aa8.27□□□□□ -1.09
SHANK2-201ENST00000338508 COX6B2Q6YFQ2 88 aa8.27□□□□□ -1.09
SHANK2-201ENST00000338508 Q96NJ1 140 aa8.27□□□□□ -1.09
SHANK2-201ENST00000338508 LINC00313P59037 77 aa8.26□□□□□ -1.09
SHANK2-201ENST00000338508 F8P00451 2351 aa8.26□□□□□ -1.09
SHANK2-201ENST00000338508 NHLRC4P0CG21 123 aaPredicted RBP8.26□□□□□ -1.09
SHANK2-201ENST00000338508 JMJD1CQ15652 2540 aa8.25□□□□□ -1.09
SHANK2-201ENST00000338508 RPL37AP61513 92 aaKnown RBP8.24□□□□□ -1.09
SHANK2-201ENST00000338508 ATP11AUNQ6ZP68 121 aa8.24□□□□□ -1.09
SHANK2-201ENST00000338508 SSBP3-AS1Q7Z2R9 100 aa8.24□□□□□ -1.09
SHANK2-201ENST00000338508 Q8N2B8 174 aa8.24□□□□□ -1.09
SHANK2-201ENST00000338508 C16orf95Q9H693 158 aa8.23□□□□□ -1.09
SHANK2-201ENST00000338508 LINC00167Q96N53 147 aa8.23□□□□□ -1.09
SHANK2-201ENST00000338508 TLN2Q9Y4G6 2542 aa8.22□□□□□ -1.09
SHANK2-201ENST00000338508 YPEL4Q96NS1 127 aa8.22□□□□□ -1.09
SHANK2-201ENST00000338508 A0A1B0GUV1 79 aa8.21□□□□□ -1.09
SHANK2-201ENST00000338508 AMELXQ99217 191 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms