RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 LINC01545Q5VT33 79 aa7.55□□□□□ -1.2
TREM2-201ENST00000338469 CFAP161Q6P656 301 aa7.55□□□□□ -1.2
TREM2-201ENST00000338469 OR10D4PQ8NGN7 298 aa7.55□□□□□ -1.2
TREM2-201ENST00000338469 IGHV1-58A0A0C4DH39 117 aa7.54□□□□□ -1.2
TREM2-201ENST00000338469 IGKCP01834 107 aa7.54□□□□□ -1.2
TREM2-201ENST00000338469 C14orf177Q52M58 125 aa7.54□□□□□ -1.2
TREM2-201ENST00000338469 LINC01561Q8N1V8 128 aa7.54□□□□□ -1.2
TREM2-201ENST00000338469 C15orf56Q8N910 161 aa7.54□□□□□ -1.2
TREM2-201ENST00000338469 SPINK8P0C7L1 97 aa7.53□□□□□ -1.2
TREM2-201ENST00000338469 ORAOV1Q8WV07 137 aa7.53□□□□□ -1.2
TREM2-201ENST00000338469 IGHV3-64A0A075B6Q5 118 aa7.52□□□□□ -1.21
TREM2-201ENST00000338469 hDV102S1A0JD36 115 aa7.52□□□□□ -1.21
TREM2-201ENST00000338469 FAM229AH3BQW9 127 aa7.52□□□□□ -1.21
TREM2-201ENST00000338469 AKR1D1P51857 326 aa7.52□□□□□ -1.21
TREM2-201ENST00000338469 GVQW2A0A096LPI5 108 aaPredicted RBP7.51□□□□□ -1.21
TREM2-201ENST00000338469 TMEM223A0PJW6 202 aa7.51□□□□□ -1.21
TREM2-201ENST00000338469 SMIM1B2RUZ4 78 aa7.51□□□□□ -1.21
TREM2-201ENST00000338469 ZNF561-AS1K7EIQ3 104 aa7.51□□□□□ -1.21
TREM2-201ENST00000338469 KRTAP10-4P60372 401 aaPredicted RBP7.51□□□□□ -1.21
TREM2-201ENST00000338469 HIGD2BQ4VC39 106 aa7.51□□□□□ -1.21
TREM2-201ENST00000338469 SCGB1D1O95968 90 aa7.5□□□□□ -1.21
TREM2-201ENST00000338469 SPAG11BQ08648 103 aa7.5□□□□□ -1.21
TREM2-201ENST00000338469 SCXQ7RTU7 201 aa7.5□□□□□ -1.21
TREM2-201ENST00000338469 TOMM7Q9P0U1 55 aa7.5□□□□□ -1.21
TREM2-201ENST00000338469 PRSS2P07478 247 aa7.49□□□□□ -1.21
TREM2-201ENST00000338469 HERVK_113P61574 105 aa7.49□□□□□ -1.21
TREM2-201ENST00000338469 LINC00528Q8N1L1 170 aa7.49□□□□□ -1.21
TREM2-201ENST00000338469 UBR4Q5T4S7 5183 aa7.49□□□□□ -1.21
TREM2-201ENST00000338469 HMCN2Q8NDA2 5059 aa7.49□□□□□ -1.21
TREM2-201ENST00000338469 IGLV5-39A0A0G2JS06 123 aa7.48□□□□□ -1.21
TREM2-201ENST00000338469 C6orf226Q5I0X4 101 aa7.48□□□□□ -1.21
TREM2-201ENST00000338469 Q8IZM0 81 aa7.48□□□□□ -1.21
TREM2-201ENST00000338469 ATOH7Q8N100 152 aa7.48□□□□□ -1.21
TREM2-201ENST00000338469 COX7B2Q8TF08 81 aa7.48□□□□□ -1.21
TREM2-201ENST00000338469 LINC00526Q96FQ7 95 aa7.48□□□□□ -1.21
TREM2-201ENST00000338469 KIAA0087Q14695 138 aa7.47□□□□□ -1.21
TREM2-201ENST00000338469 C2orf48Q96LS8 159 aa7.47□□□□□ -1.21
TREM2-201ENST00000338469 F8WDY8 70 aa7.46□□□□□ -1.22
TREM2-201ENST00000338469 LEPROTO15243 131 aa7.46□□□□□ -1.22
TREM2-201ENST00000338469 CKS1BP61024 79 aa7.46□□□□□ -1.22
TREM2-201ENST00000338469 JOSD1Q15040 202 aaPredicted RBP7.46□□□□□ -1.22
TREM2-201ENST00000338469 STPG4Q8N801 248 aa7.46□□□□□ -1.22
TREM2-201ENST00000338469 CIRBP-AS1Q8TBR5 109 aa7.46□□□□□ -1.22
TREM2-201ENST00000338469 CAMK2N2Q96S95 79 aa7.46□□□□□ -1.22
TREM2-201ENST00000338469 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.45□□□□□ -1.22
TREM2-201ENST00000338469 NDUFA1O15239 70 aa7.45□□□□□ -1.22
TREM2-201ENST00000338469 CXCL5P42830 114 aa7.45□□□□□ -1.22
TREM2-201ENST00000338469 SYCNQ0VAF6 134 aa7.45□□□□□ -1.22
TREM2-201ENST00000338469 PLEKHB2Q96CS7 222 aa7.45□□□□□ -1.22
TREM2-201ENST00000338469 E9PLD3 99 aa7.44□□□□□ -1.22
TREM2-201ENST00000338469 PANO1I0J062 215 aa7.44□□□□□ -1.22
TREM2-201ENST00000338469 CNBPP62633 177 aaKnown RBP7.44□□□□□ -1.22
TREM2-201ENST00000338469 CARD19Q96LW7 228 aa7.44□□□□□ -1.22
TREM2-201ENST00000338469 HSBP1L1C9JCN9 74 aa7.43□□□□□ -1.22
TREM2-201ENST00000338469 J3QL48 77 aa7.43□□□□□ -1.22
TREM2-201ENST00000338469 J3QQQ9 107 aa7.43□□□□□ -1.22
TREM2-201ENST00000338469 SLPIP03973 132 aa7.43□□□□□ -1.22
TREM2-201ENST00000338469 C2orf82Q6UX34 121 aa7.43□□□□□ -1.22
TREM2-201ENST00000338469 UNQ6190/PRO20217Q6UXQ8 127 aa7.43□□□□□ -1.22
TREM2-201ENST00000338469 Q6ZRU5 148 aa7.43□□□□□ -1.22
TREM2-201ENST00000338469 KRTAP29-1A8MX34 341 aaPredicted RBP7.42□□□□□ -1.22
TREM2-201ENST00000338469 PLA2G1BP04054 148 aaKnown RBP7.42□□□□□ -1.22
TREM2-201ENST00000338469 LGALS3P17931 250 aaKnown RBP7.42□□□□□ -1.22
TREM2-201ENST00000338469 HNRNPA3P51991 378 aaKnown RBP7.42□□□□□ -1.22
TREM2-201ENST00000338469 TSPEAR-AS2P59090 65 aa7.42□□□□□ -1.22
TREM2-201ENST00000338469 SFTA2Q6UW10 78 aa7.42□□□□□ -1.22
TREM2-201ENST00000338469 TRBV30A0A0K0K1B3 111 aa7.41□□□□□ -1.22
TREM2-201ENST00000338469 MAJINQ3KP22 176 aa7.41□□□□□ -1.22
TREM2-201ENST00000338469 ANKRD39Q53RE8 183 aa7.41□□□□□ -1.22
TREM2-201ENST00000338469 PYY3Q5JQD4 70 aa7.41□□□□□ -1.22
TREM2-201ENST00000338469 C10orf25Q5T742 122 aa7.41□□□□□ -1.22
TREM2-201ENST00000338469 IGKV2D-26A0A0A0MRZ7 120 aa7.4□□□□□ -1.22
TREM2-201ENST00000338469 MYMXA0A1B0GTQ4 84 aa7.4□□□□□ -1.22
TREM2-201ENST00000338469 LOC105371267A0A1B0GV96 52 aa7.4□□□□□ -1.22
TREM2-201ENST00000338469 NMUP48645 174 aa7.4□□□□□ -1.22
TREM2-201ENST00000338469 RNF151Q2KHN1 245 aa7.4□□□□□ -1.22
TREM2-201ENST00000338469 C9orf163Q8N9P6 203 aa7.4□□□□□ -1.22
TREM2-201ENST00000338469 ZNF625Q96I27 306 aaPredicted RBP7.4□□□□□ -1.22
TREM2-201ENST00000338469 C6orf48Q9UBA6 75 aa7.4□□□□□ -1.22
TREM2-201ENST00000338469 NDUFA12Q9UI09 145 aa7.4□□□□□ -1.22
TREM2-201ENST00000338469 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
TREM2-201ENST00000338469 HERV-K104P63124 156 aa7.39□□□□□ -1.23
TREM2-201ENST00000338469 VAMP8Q9BV40 100 aa7.39□□□□□ -1.23
TREM2-201ENST00000338469 PKIGQ9Y2B9 76 aa7.39□□□□□ -1.23
TREM2-201ENST00000338469 LOC107984640A0A0U1RRK4 108 aa7.38□□□□□ -1.23
TREM2-201ENST00000338469 C9orf116Q5BN46 136 aaPredicted RBP7.38□□□□□ -1.23
TREM2-201ENST00000338469 SDIM1Q6ZPB5 146 aa7.38□□□□□ -1.23
TREM2-201ENST00000338469 PAM16Q9Y3D7 125 aa7.38□□□□□ -1.23
TREM2-201ENST00000338469 ZNF815PA8K554 130 aa7.37□□□□□ -1.23
TREM2-201ENST00000338469 SPATA45Q537H7 98 aa7.37□□□□□ -1.23
TREM2-201ENST00000338469 ERG28Q9UKR5 140 aa7.37□□□□□ -1.23
TREM2-201ENST00000338469 RPL18AQ02543 176 aaKnown RBP7.36□□□□□ -1.23
TREM2-201ENST00000338469 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
TREM2-201ENST00000338469 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
TREM2-201ENST00000338469 TNXBP22105 4242 aa7.35□□□□□ -1.23
TREM2-201ENST00000338469 TLX1NBP0CAT3 122 aa7.35□□□□□ -1.23
TREM2-201ENST00000338469 SMIM6P0DI80 62 aa7.35□□□□□ -1.23
TREM2-201ENST00000338469 PFN2P35080 140 aa7.35□□□□□ -1.23
TREM2-201ENST00000338469 S100A12P80511 92 aa7.35□□□□□ -1.23
TREM2-201ENST00000338469 COX17Q14061 63 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms