RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 LRP1BQ9NZR2 4599 aa9.11□□□□□ -0.95
APOBEC3B-202ENST00000335760 TMEM223A0PJW6 202 aa9.11□□□□□ -0.95
APOBEC3B-202ENST00000335760 F8WDY8 70 aa9.11□□□□□ -0.95
APOBEC3B-202ENST00000335760 NDUFA1O15239 70 aa9.11□□□□□ -0.95
APOBEC3B-202ENST00000335760 KRTAP10-1P60331 282 aa9.11□□□□□ -0.95
APOBEC3B-202ENST00000335760 BIRC6Q9NR09 4857 aa9.1□□□□□ -0.95
APOBEC3B-202ENST00000335760 IGLV5-39A0A0G2JS06 123 aa9.1□□□□□ -0.95
APOBEC3B-202ENST00000335760 C20orf202A1L168 122 aa9.1□□□□□ -0.95
APOBEC3B-202ENST00000335760 CKS1BP61024 79 aa9.1□□□□□ -0.95
APOBEC3B-202ENST00000335760 C10orf25Q5T742 122 aa9.1□□□□□ -0.95
APOBEC3B-202ENST00000335760 C2orf82Q6UX34 121 aa9.1□□□□□ -0.95
APOBEC3B-202ENST00000335760 UNQ6190/PRO20217Q6UXQ8 127 aa9.1□□□□□ -0.95
APOBEC3B-202ENST00000335760 DNAH8Q96JB1 4490 aa9.08□□□□□ -0.96
APOBEC3B-202ENST00000335760 CXCL5P42830 114 aa9.07□□□□□ -0.96
APOBEC3B-202ENST00000335760 HERVK_113P61574 105 aa9.07□□□□□ -0.96
APOBEC3B-202ENST00000335760 C6orf48Q9UBA6 75 aa9.07□□□□□ -0.96
APOBEC3B-202ENST00000335760 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
APOBEC3B-202ENST00000335760 SDIM1Q6ZPB5 146 aa9.06□□□□□ -0.96
APOBEC3B-202ENST00000335760 TRBV30A0A0K0K1B3 111 aa9.05□□□□□ -0.96
APOBEC3B-202ENST00000335760 ATOH7Q8N100 152 aa9.04□□□□□ -0.96
APOBEC3B-202ENST00000335760 LOC107984640A0A0U1RRK4 108 aa9.03□□□□□ -0.96
APOBEC3B-202ENST00000335760 LEPROTO15243 131 aa9.03□□□□□ -0.96
APOBEC3B-202ENST00000335760 AKR1D1P51857 326 aa9.03□□□□□ -0.96
APOBEC3B-202ENST00000335760 C9orf116Q5BN46 136 aaPredicted RBP9.03□□□□□ -0.96
APOBEC3B-202ENST00000335760 STPG4Q8N801 248 aa9.03□□□□□ -0.96
APOBEC3B-202ENST00000335760 PLEKHB2Q96CS7 222 aa9.03□□□□□ -0.96
APOBEC3B-202ENST00000335760 FAM30AQ9NZY2 134 aa9.03□□□□□ -0.96
APOBEC3B-202ENST00000335760 PKIGQ9Y2B9 76 aa9.03□□□□□ -0.96
APOBEC3B-202ENST00000335760 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.97
APOBEC3B-202ENST00000335760 E9PLD3 99 aa9.01□□□□□ -0.97
APOBEC3B-202ENST00000335760 SCGB1D1O95968 90 aa9.01□□□□□ -0.97
APOBEC3B-202ENST00000335760 TSPEAR-AS2P59090 65 aa9.01□□□□□ -0.97
APOBEC3B-202ENST00000335760 RPL18AQ02543 176 aaKnown RBP9.01□□□□□ -0.97
APOBEC3B-202ENST00000335760 GAGE2BQ13066 116 aa9.01□□□□□ -0.97
APOBEC3B-202ENST00000335760 A0A096LNI7 61 aa9□□□□□ -0.97
APOBEC3B-202ENST00000335760 IGKV2-24A0A0C4DH68 120 aa9□□□□□ -0.97
APOBEC3B-202ENST00000335760 PANO1I0J062 215 aa9□□□□□ -0.97
APOBEC3B-202ENST00000335760 J3QQQ9 107 aa9□□□□□ -0.97
APOBEC3B-202ENST00000335760 CHTF8P0CG12 524 aa9□□□□□ -0.97
APOBEC3B-202ENST00000335760 SFTA2Q6UW10 78 aa9□□□□□ -0.97
APOBEC3B-202ENST00000335760 Q6ZSA8 131 aa9□□□□□ -0.97
APOBEC3B-202ENST00000335760 ZNF625Q96I27 306 aaPredicted RBP9□□□□□ -0.97
APOBEC3B-202ENST00000335760 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9□□□□□ -0.97
APOBEC3B-202ENST00000335760 RYR1P21817 5038 aa8.99□□□□□ -0.97
APOBEC3B-202ENST00000335760 TLX1NBP0CAT3 122 aa8.99□□□□□ -0.97
APOBEC3B-202ENST00000335760 LGALS3P17931 250 aaKnown RBP8.99□□□□□ -0.97
APOBEC3B-202ENST00000335760 NDUFA12Q9UI09 145 aa8.99□□□□□ -0.97
APOBEC3B-202ENST00000335760 MYMXA0A1B0GTQ4 84 aa8.99□□□□□ -0.97
APOBEC3B-202ENST00000335760 NDUFC2-KCTD14E9PQ53 114 aa8.99□□□□□ -0.97
APOBEC3B-202ENST00000335760 PTTG1IPP53801 180 aa8.99□□□□□ -0.97
APOBEC3B-202ENST00000335760 HAMPP81172 84 aa8.99□□□□□ -0.97
APOBEC3B-202ENST00000335760 Q6ZRP5 223 aa8.99□□□□□ -0.97
APOBEC3B-202ENST00000335760 DPH3Q96FX2 82 aa8.99□□□□□ -0.97
APOBEC3B-202ENST00000335760 MAJINQ3KP22 176 aa8.98□□□□□ -0.97
APOBEC3B-202ENST00000335760 GAGE2EQ4V326 116 aa8.98□□□□□ -0.97
APOBEC3B-202ENST00000335760 SPACA4Q8TDM5 124 aa8.98□□□□□ -0.97
APOBEC3B-202ENST00000335760 GAGE2DQ9UEU5 116 aa8.98□□□□□ -0.97
APOBEC3B-202ENST00000335760 IGKV2D-26A0A0A0MRZ7 120 aa8.97□□□□□ -0.97
APOBEC3B-202ENST00000335760 PFN2P35080 140 aa8.97□□□□□ -0.97
APOBEC3B-202ENST00000335760 XGP55808 180 aa8.97□□□□□ -0.97
APOBEC3B-202ENST00000335760 CIRBPQ14011 172 aaKnown RBP8.97□□□□□ -0.97
APOBEC3B-202ENST00000335760 ANKRD39Q53RE8 183 aa8.97□□□□□ -0.97
APOBEC3B-202ENST00000335760 LINC00474Q9P2X8 69 aa8.97□□□□□ -0.97
APOBEC3B-202ENST00000335760 ERG28Q9UKR5 140 aa8.97□□□□□ -0.97
APOBEC3B-202ENST00000335760 KIAA1109Q2LD37 5005 aa8.97□□□□□ -0.97
APOBEC3B-202ENST00000335760 CDK2AP2O75956 126 aa8.96□□□□□ -0.98
APOBEC3B-202ENST00000335760 NMUP48645 174 aa8.96□□□□□ -0.98
APOBEC3B-202ENST00000335760 HERV-K104P63124 156 aa8.96□□□□□ -0.98
APOBEC3B-202ENST00000335760 HSBP1L1C9JCN9 74 aa8.95□□□□□ -0.98
APOBEC3B-202ENST00000335760 JOSD1Q15040 202 aaPredicted RBP8.95□□□□□ -0.98
APOBEC3B-202ENST00000335760 MEIG1Q5JSS6 88 aa8.95□□□□□ -0.98
APOBEC3B-202ENST00000335760 SCXQ7RTU7 201 aa8.95□□□□□ -0.98
APOBEC3B-202ENST00000335760 COX17Q14061 63 aa8.94□□□□□ -0.98
APOBEC3B-202ENST00000335760 CIRBP-AS1Q8TBR5 109 aa8.94□□□□□ -0.98
APOBEC3B-202ENST00000335760 A0A087WYN8 130 aa8.93□□□□□ -0.98
APOBEC3B-202ENST00000335760 A0A0U1RRA0 63 aa8.93□□□□□ -0.98
APOBEC3B-202ENST00000335760 LINC00158P58513 81 aa8.93□□□□□ -0.98
APOBEC3B-202ENST00000335760 TTTY13Q9BZ97 58 aa8.93□□□□□ -0.98
APOBEC3B-202ENST00000335760 ZNF815PA8K554 130 aa8.92□□□□□ -0.98
APOBEC3B-202ENST00000335760 LINC00587B1AMM8 73 aa8.92□□□□□ -0.98
APOBEC3B-202ENST00000335760 SMIM13P0DJ93 91 aa8.92□□□□□ -0.98
APOBEC3B-202ENST00000335760 C9orf129Q5T035 196 aaKnown RBP8.92□□□□□ -0.98
APOBEC3B-202ENST00000335760 XAGE1AQ9HD64 81 aa8.92□□□□□ -0.98
APOBEC3B-202ENST00000335760 A0A1W2PNN7 141 aa8.91□□□□□ -0.98
APOBEC3B-202ENST00000335760 PLAC8Q9NZF1 115 aa8.91□□□□□ -0.98
APOBEC3B-202ENST00000335760 A0A0J9YXY3 114 aa8.9□□□□□ -0.98
APOBEC3B-202ENST00000335760 HSPG2P98160 4391 aa8.89□□□□□ -0.99
APOBEC3B-202ENST00000335760 FAM168BA1KXE4 195 aa8.89□□□□□ -0.99
APOBEC3B-202ENST00000335760 PYY3Q5JQD4 70 aa8.89□□□□□ -0.99
APOBEC3B-202ENST00000335760 PCP2Q8IVA1 136 aa8.89□□□□□ -0.99
APOBEC3B-202ENST00000335760 SND1-IT1Q9HBX3 110 aa8.89□□□□□ -0.99
APOBEC3B-202ENST00000335760 FAM19A5Q7Z5A7 132 aaPredicted RBP8.88□□□□□ -0.99
APOBEC3B-202ENST00000335760 SMR3BP02814 79 aaPredicted RBP8.87□□□□□ -0.99
APOBEC3B-202ENST00000335760 MIR7-3HGQ8N6C7 128 aa8.87□□□□□ -0.99
APOBEC3B-202ENST00000335760 LCE2BO14633 110 aa8.86□□□□□ -0.99
APOBEC3B-202ENST00000335760 DAND5Q8N907 189 aa8.86□□□□□ -0.99
APOBEC3B-202ENST00000335760 VAMP8Q9BV40 100 aa8.86□□□□□ -0.99
APOBEC3B-202ENST00000335760 PAM16Q9Y3D7 125 aa8.86□□□□□ -0.99
APOBEC3B-202ENST00000335760 HERC2O95714 4834 aa8.86□□□□□ -0.99
APOBEC3B-202ENST00000335760 EPM2AB3EWF7 344 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms