RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SLPIP03973 132 aa12.93□□□□□ -0.34
PKP3-201ENST00000331563 XCL1P47992 114 aa12.93□□□□□ -0.34
PKP3-201ENST00000331563 XCL2Q9UBD3 114 aa12.93□□□□□ -0.34
PKP3-201ENST00000331563 HILS1P60008 231 aa12.92□□□□□ -0.34
PKP3-201ENST00000331563 LINC00158P58513 81 aa12.92□□□□□ -0.34
PKP3-201ENST00000331563 DEFB131AP59861 70 aa12.92□□□□□ -0.34
PKP3-201ENST00000331563 Q6YL49 198 aa12.92□□□□□ -0.34
PKP3-201ENST00000331563 C18orf65Q6ZTR6 163 aa12.92□□□□□ -0.34
PKP3-201ENST00000331563 DEFB136Q30KP8 78 aa12.91□□□□□ -0.34
PKP3-201ENST00000331563 TRAV23DV6A0A075B6W5 121 aa12.9□□□□□ -0.34
PKP3-201ENST00000331563 SMIM26A0A096LP01 95 aa12.9□□□□□ -0.34
PKP3-201ENST00000331563 C1orf195Q5TG92 126 aa12.9□□□□□ -0.34
PKP3-201ENST00000331563 WFDC9Q8NEX5 89 aa12.9□□□□□ -0.34
PKP3-201ENST00000331563 OTOGQ6ZRI0 2925 aa12.9□□□□□ -0.34
PKP3-201ENST00000331563 RPL36AP83881 106 aaKnown RBP12.9□□□□□ -0.34
PKP3-201ENST00000331563 FP248Q71RG6 208 aaPredicted RBP12.9□□□□□ -0.34
PKP3-201ENST00000331563 RPL36ALQ969Q0 106 aaKnown RBP12.9□□□□□ -0.34
PKP3-201ENST00000331563 OBSCN-AS1Q96MR7 158 aa12.9□□□□□ -0.34
PKP3-201ENST00000331563 IGKV2-28A0A075B6P5 120 aa12.89□□□□□ -0.35
PKP3-201ENST00000331563 H0YGX0 51 aa12.89□□□□□ -0.35
PKP3-201ENST00000331563 H7BZZ5 65 aa12.89□□□□□ -0.35
PKP3-201ENST00000331563 FSHBP01225 129 aa12.89□□□□□ -0.35
PKP3-201ENST00000331563 IGKV2D-28P01615 120 aa12.89□□□□□ -0.35
PKP3-201ENST00000331563 JMJD1CQ15652 2540 aa12.89□□□□□ -0.35
PKP3-201ENST00000331563 ZNF702PQ9H963 129 aa12.89□□□□□ -0.35
PKP3-201ENST00000331563 FLNBO75369 2602 aaKnown RBP12.88□□□□□ -0.35
PKP3-201ENST00000331563 IGKV3OR2-268A0A0C4DH90 116 aa12.88□□□□□ -0.35
PKP3-201ENST00000331563 C11orf44Q8N8P7 122 aa12.88□□□□□ -0.35
PKP3-201ENST00000331563 SETXQ7Z333 2677 aaKnown RBP12.87□□□□□ -0.35
PKP3-201ENST00000331563 ANK3Q12955 4377 aaKnown RBP12.86□□□□□ -0.35
PKP3-201ENST00000331563 A0A0U1RQV1 116 aa12.86□□□□□ -0.35
PKP3-201ENST00000331563 PAX4O43316 350 aa12.86□□□□□ -0.35
PKP3-201ENST00000331563 BRK1Q8WUW1 75 aa12.86□□□□□ -0.35
PKP3-201ENST00000331563 KHDC1LQ5JSQ8 128 aa12.85□□□□□ -0.35
PKP3-201ENST00000331563 HIVEP2P31629 2446 aa12.85□□□□□ -0.35
PKP3-201ENST00000331563 UBE2L6O14933 153 aa12.84□□□□□ -0.35
PKP3-201ENST00000331563 LYPD5Q6UWN5 251 aa12.84□□□□□ -0.35
PKP3-201ENST00000331563 COX7B2Q8TF08 81 aa12.84□□□□□ -0.35
PKP3-201ENST00000331563 ORMDL1Q9P0S3 153 aa12.84□□□□□ -0.35
PKP3-201ENST00000331563 CDC42SE2Q9NRR3 84 aa12.83□□□□□ -0.36
PKP3-201ENST00000331563 FN1P02751 2386 aaKnown RBP12.83□□□□□ -0.36
PKP3-201ENST00000331563 S100A7L2Q5SY68 101 aa12.83□□□□□ -0.36
PKP3-201ENST00000331563 ATP5EP2Q5VTU8 51 aa12.83□□□□□ -0.36
PKP3-201ENST00000331563 CCL18P55774 89 aa12.82□□□□□ -0.36
PKP3-201ENST00000331563 ENHOQ6UWT2 76 aa12.82□□□□□ -0.36
PKP3-201ENST00000331563 FAM19A1Q7Z5A9 133 aa12.82□□□□□ -0.36
PKP3-201ENST00000331563 CCKP06307 115 aa12.82□□□□□ -0.36
PKP3-201ENST00000331563 TRGV1A0A0A0MS02 117 aa12.81□□□□□ -0.36
PKP3-201ENST00000331563 SLURP1P55000 103 aa12.81□□□□□ -0.36
PKP3-201ENST00000331563 RNASE1P07998 156 aaKnown RBP12.8□□□□□ -0.36
PKP3-201ENST00000331563 SMR3AQ99954 134 aa12.8□□□□□ -0.36
PKP3-201ENST00000331563 NTM-AS1Q6ZSK4 140 aa12.8□□□□□ -0.36
PKP3-201ENST00000331563 C11orf72Q8NBR9 251 aa12.8□□□□□ -0.36
PKP3-201ENST00000331563 FAM19A3Q7Z5A8 133 aa12.8□□□□□ -0.36
PKP3-201ENST00000331563 ESM1Q9NQ30 184 aa12.78□□□□□ -0.36
PKP3-201ENST00000331563 LINC00474Q9P2X8 69 aa12.78□□□□□ -0.36
PKP3-201ENST00000331563 KLKP1Q107X0 134 aa12.77□□□□□ -0.36
PKP3-201ENST00000331563 C11orf68Q9H3H3 251 aaKnown RBP12.77□□□□□ -0.36
PKP3-201ENST00000331563 A0A1W2PRX2 142 aa12.77□□□□□ -0.37
PKP3-201ENST00000331563 TMEM89A2RUT3 159 aa12.76□□□□□ -0.37
PKP3-201ENST00000331563 TRAV7A0A075B6U4 112 aa12.76□□□□□ -0.37
PKP3-201ENST00000331563 INSP01308 110 aa12.76□□□□□ -0.37
PKP3-201ENST00000331563 DNAJC9-AS1A6NH13 148 aa12.75□□□□□ -0.37
PKP3-201ENST00000331563 UBL5Q9BZL1 73 aa12.75□□□□□ -0.37
PKP3-201ENST00000331563 K7EQD1 137 aa12.75□□□□□ -0.37
PKP3-201ENST00000331563 TRBV10-3A0A0K0K1G6 114 aa12.74□□□□□ -0.37
PKP3-201ENST00000331563 KRTAP1-1Q07627 177 aa12.74□□□□□ -0.37
PKP3-201ENST00000331563 UBE2E2Q96LR5 201 aa12.74□□□□□ -0.37
PKP3-201ENST00000331563 TRBV7-6A0A0J9YX20 115 aa12.74□□□□□ -0.37
PKP3-201ENST00000331563 RBM3P98179 157 aaKnown RBP12.74□□□□□ -0.37
PKP3-201ENST00000331563 HIVEP1P15822 2718 aa12.74□□□□□ -0.37
PKP3-201ENST00000331563 JMJD7-PLA2G4BH0Y9G9 81 aa12.73□□□□□ -0.37
PKP3-201ENST00000331563 SS18Q15532 418 aa12.73□□□□□ -0.37
PKP3-201ENST00000331563 VWFP04275 2813 aa12.73□□□□□ -0.37
PKP3-201ENST00000331563 F8WEM9 126 aa12.72□□□□□ -0.37
PKP3-201ENST00000331563 SNURFQ9Y675 71 aa12.72□□□□□ -0.37
PKP3-201ENST00000331563 BCE1O60756 84 aa12.72□□□□□ -0.37
PKP3-201ENST00000331563 IBA57-AS1B1ANH7 110 aa12.71□□□□□ -0.37
PKP3-201ENST00000331563 RMI2Q96E14 147 aa12.71□□□□□ -0.37
PKP3-201ENST00000331563 LINC00482Q8N8I6 264 aa12.7□□□□□ -0.38
PKP3-201ENST00000331563 TRBV10-1A0A0K0K1A3 114 aa12.7□□□□□ -0.38
PKP3-201ENST00000331563 Q6ZTI0 123 aa12.7□□□□□ -0.38
PKP3-201ENST00000331563 NSD1Q96L73 2696 aaPredicted RBP12.69□□□□□ -0.38
PKP3-201ENST00000331563 TRBV6-4A0A1B0GX49 114 aa12.69□□□□□ -0.38
PKP3-201ENST00000331563 MAP6D1Q9H9H5 199 aa12.69□□□□□ -0.38
PKP3-201ENST00000331563 TMEM256-PLSCR3K7ERE1 68 aa12.68□□□□□ -0.38
PKP3-201ENST00000331563 C6orf226Q5I0X4 101 aa12.68□□□□□ -0.38
PKP3-201ENST00000331563 TENM1Q9UKZ4 2725 aa12.68□□□□□ -0.38
PKP3-201ENST00000331563 DYNLRB2Q8TF09 96 aa12.68□□□□□ -0.38
PKP3-201ENST00000331563 A8MTW9 85 aa12.66□□□□□ -0.38
PKP3-201ENST00000331563 Q8N814 137 aa12.66□□□□□ -0.38
PKP3-201ENST00000331563 PRR3P79522 188 aaKnown RBP12.65□□□□□ -0.38
PKP3-201ENST00000331563 HAMPP81172 84 aa12.65□□□□□ -0.38
PKP3-201ENST00000331563 LOC100131303A0A0U1RQF7 123 aa12.64□□□□□ -0.39
PKP3-201ENST00000331563 IGLV4-60A0A075B6I1 120 aa12.63□□□□□ -0.39
PKP3-201ENST00000331563 NDUFC1O43677 76 aa12.63□□□□□ -0.39
PKP3-201ENST00000331563 ATP5EP56381 51 aaPredicted RBP12.63□□□□□ -0.39
PKP3-201ENST00000331563 ATRQ13535 2644 aa12.63□□□□□ -0.39
PKP3-201ENST00000331563 IGHV3OR16-9A0A0B4J2B5 98 aa12.63□□□□□ -0.39
PKP3-201ENST00000331563 TEP1Q99973 2627 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms