RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 LINC01600Q96MT4 127 aa11.29□□□□□ -0.6
RAB28-202ENST00000330852 C5orf38Q86SI9 138 aa11.29□□□□□ -0.6
RAB28-202ENST00000330852 GAGE2BQ13066 116 aa11.28□□□□□ -0.6
RAB28-202ENST00000330852 RPL39P62891 51 aaKnown RBP11.27□□□□□ -0.61
RAB28-202ENST00000330852 PMCHL1Q16048 86 aa11.27□□□□□ -0.61
RAB28-202ENST00000330852 SPATA45Q537H7 98 aa11.27□□□□□ -0.61
RAB28-202ENST00000330852 NPYP01303 97 aa11.26□□□□□ -0.61
RAB28-202ENST00000330852 LINC00614P0C842 121 aa11.26□□□□□ -0.61
RAB28-202ENST00000330852 REG3GQ6UW15 175 aa11.26□□□□□ -0.61
RAB28-202ENST00000330852 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
RAB28-202ENST00000330852 IGHV3OR16-9A0A0B4J2B5 98 aa11.26□□□□□ -0.61
RAB28-202ENST00000330852 IGLC3P0DOY3 106 aa11.26□□□□□ -0.61
RAB28-202ENST00000330852 SPAG11BQ08648 103 aa11.26□□□□□ -0.61
RAB28-202ENST00000330852 FAM104AQ969W3 186 aa11.25□□□□□ -0.61
RAB28-202ENST00000330852 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.24□□□□□ -0.61
RAB28-202ENST00000330852 SRSF9Q13242 221 aaKnown RBP eCLIP11.24□□□□□ -0.61
RAB28-202ENST00000330852 MRPL35Q9NZE8 188 aaKnown RBP11.24□□□□□ -0.61
RAB28-202ENST00000330852 UQCR10Q9UDW1 63 aa11.23□□□□□ -0.61
RAB28-202ENST00000330852 LAMTOR2Q9Y2Q5 125 aa11.23□□□□□ -0.61
RAB28-202ENST00000330852 PYGO1Q9Y3Y4 419 aa11.23□□□□□ -0.61
RAB28-202ENST00000330852 C20orf202A1L168 122 aa11.23□□□□□ -0.61
RAB28-202ENST00000330852 PRSS47A8MTI9 375 aa11.23□□□□□ -0.61
RAB28-202ENST00000330852 IFI27P40305 119 aaPredicted RBP11.23□□□□□ -0.61
RAB28-202ENST00000330852 LINC00173Q6ZV60 143 aa11.23□□□□□ -0.61
RAB28-202ENST00000330852 ORAOV1Q8WV07 137 aa11.23□□□□□ -0.61
RAB28-202ENST00000330852 PRELID3AQ96N28 172 aa11.23□□□□□ -0.61
RAB28-202ENST00000330852 A0A0J9YXV3 536 aa11.22□□□□□ -0.61
RAB28-202ENST00000330852 A0A1W2PNN7 141 aa11.22□□□□□ -0.61
RAB28-202ENST00000330852 ATOH7Q8N100 152 aa11.22□□□□□ -0.61
RAB28-202ENST00000330852 SYS1-DBNDD2H3BUS1 97 aa11.21□□□□□ -0.61
RAB28-202ENST00000330852 NDUFA1O15239 70 aa11.21□□□□□ -0.61
RAB28-202ENST00000330852 LEPROTL1O95214 131 aa11.21□□□□□ -0.61
RAB28-202ENST00000330852 RPL18AQ02543 176 aaKnown RBP11.21□□□□□ -0.61
RAB28-202ENST00000330852 C9orf116Q5BN46 136 aaPredicted RBP11.21□□□□□ -0.61
RAB28-202ENST00000330852 OPRPNQ99935 248 aaPredicted RBP11.21□□□□□ -0.62
RAB28-202ENST00000330852 TLX1NBP0CAT3 122 aa11.19□□□□□ -0.62
RAB28-202ENST00000330852 A0A087WZ39 114 aa11.18□□□□□ -0.62
RAB28-202ENST00000330852 KRTAP10-8P60410 259 aa11.18□□□□□ -0.62
RAB28-202ENST00000330852 PET117Q6UWS5 81 aa11.18□□□□□ -0.62
RAB28-202ENST00000330852 TMEM141Q96I45 108 aa11.18□□□□□ -0.62
RAB28-202ENST00000330852 MAP1LC3AQ9H492 121 aa11.18□□□□□ -0.62
RAB28-202ENST00000330852 Q6ZN92 141 aa11.17□□□□□ -0.62
RAB28-202ENST00000330852 HSPB8Q9UJY1 196 aa11.17□□□□□ -0.62
RAB28-202ENST00000330852 TNXBP22105 4242 aa11.16□□□□□ -0.62
RAB28-202ENST00000330852 IGLV4-3A0A075B6K6 122 aa11.16□□□□□ -0.62
RAB28-202ENST00000330852 A0A096LNJ9 63 aa11.16□□□□□ -0.62
RAB28-202ENST00000330852 K7EMI3 77 aa11.16□□□□□ -0.62
RAB28-202ENST00000330852 LINC01561Q8N1V8 128 aa11.16□□□□□ -0.62
RAB28-202ENST00000330852 PSORS1C2Q9UIG4 136 aa11.16□□□□□ -0.62
RAB28-202ENST00000330852 NPSP0C0P6 89 aa11.15□□□□□ -0.62
RAB28-202ENST00000330852 LINC00242Q5T6M2 205 aa11.15□□□□□ -0.62
RAB28-202ENST00000330852 LINC01545Q5VT33 79 aa11.15□□□□□ -0.62
RAB28-202ENST00000330852 FA2HQ7L5A8 372 aa11.15□□□□□ -0.62
RAB28-202ENST00000330852 Q8N8P6 123 aa11.15□□□□□ -0.62
RAB28-202ENST00000330852 MAP1LC3CQ9BXW4 147 aa11.15□□□□□ -0.62
RAB28-202ENST00000330852 CYSLTR1Q9Y271 337 aa11.15□□□□□ -0.63
RAB28-202ENST00000330852 UNQ6190/PRO20217Q6UXQ8 127 aa11.14□□□□□ -0.63
RAB28-202ENST00000330852 TRBV30A0A0K0K1B3 111 aa11.13□□□□□ -0.63
RAB28-202ENST00000330852 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
RAB28-202ENST00000330852 KIAA0087Q14695 138 aa11.13□□□□□ -0.63
RAB28-202ENST00000330852 ORMDL2Q53FV1 153 aa11.13□□□□□ -0.63
RAB28-202ENST00000330852 C10orf25Q5T742 122 aa11.13□□□□□ -0.63
RAB28-202ENST00000330852 C6orf48Q9UBA6 75 aa11.13□□□□□ -0.63
RAB28-202ENST00000330852 LINC01546A6NGU7 62 aa11.12□□□□□ -0.63
RAB28-202ENST00000330852 COL5A1-AS1Q5SY13 56 aa11.12□□□□□ -0.63
RAB28-202ENST00000330852 PHF5AQ7RTV0 110 aaKnown RBP11.12□□□□□ -0.63
RAB28-202ENST00000330852 UBR4Q5T4S7 5183 aa11.12□□□□□ -0.63
RAB28-202ENST00000330852 G0S2P27469 103 aa11.12□□□□□ -0.63
RAB28-202ENST00000330852 UBE2D1P51668 147 aa11.12□□□□□ -0.63
RAB28-202ENST00000330852 C2orf66Q6UXQ4 117 aa11.12□□□□□ -0.63
RAB28-202ENST00000330852 C1orf137Q5JT78 98 aa11.11□□□□□ -0.63
RAB28-202ENST00000330852 VCX2Q9H322 139 aa11.11□□□□□ -0.63
RAB28-202ENST00000330852 BATFQ16520 125 aa11.1□□□□□ -0.63
RAB28-202ENST00000330852 AMELXQ99217 191 aa11.1□□□□□ -0.63
RAB28-202ENST00000330852 NXT2Q9NPJ8 142 aaKnown RBP11.1□□□□□ -0.63
RAB28-202ENST00000330852 PAPPA-AS1Q5QFB9 102 aa11.09□□□□□ -0.63
RAB28-202ENST00000330852 NDUFC2-KCTD14E9PQ53 114 aa11.08□□□□□ -0.64
RAB28-202ENST00000330852 SEC11AP67812 179 aa11.08□□□□□ -0.64
RAB28-202ENST00000330852 GAGE2EQ4V326 116 aa11.08□□□□□ -0.64
RAB28-202ENST00000330852 FAM19A3Q7Z5A8 133 aa11.08□□□□□ -0.64
RAB28-202ENST00000330852 DIRC1Q969H9 104 aa11.08□□□□□ -0.64
RAB28-202ENST00000330852 GAGE2DQ9UEU5 116 aa11.08□□□□□ -0.64
RAB28-202ENST00000330852 IGIPA6NJ69 53 aa11.07□□□□□ -0.64
RAB28-202ENST00000330852 DLEU1O43261 78 aa11.07□□□□□ -0.64
RAB28-202ENST00000330852 HBDP02042 147 aa11.07□□□□□ -0.64
RAB28-202ENST00000330852 IGLV7-43P04211 117 aa11.07□□□□□ -0.64
RAB28-202ENST00000330852 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
RAB28-202ENST00000330852 FAM168BA1KXE4 195 aa11.06□□□□□ -0.64
RAB28-202ENST00000330852 PRSS2P07478 247 aa11.06□□□□□ -0.64
RAB28-202ENST00000330852 PMCHL2Q9BQD1 86 aa11.06□□□□□ -0.64
RAB28-202ENST00000330852 HSBP1L1C9JCN9 74 aa11.05□□□□□ -0.64
RAB28-202ENST00000330852 HINT1P49773 126 aaPredicted RBP11.05□□□□□ -0.64
RAB28-202ENST00000330852 SLC25A34Q6PIV7 304 aa11.05□□□□□ -0.64
RAB28-202ENST00000330852 FAM19A5Q7Z5A7 132 aaPredicted RBP11.05□□□□□ -0.64
RAB28-202ENST00000330852 H0Y8G0 127 aa11.04□□□□□ -0.64
RAB28-202ENST00000330852 C2orf82Q6UX34 121 aa11.04□□□□□ -0.64
RAB28-202ENST00000330852 CKS1BP61024 79 aa11.04□□□□□ -0.64
RAB28-202ENST00000330852 HERVK_113P63121 156 aa11.04□□□□□ -0.64
RAB28-202ENST00000330852 Q8IZM0 81 aa11.04□□□□□ -0.64
RAB28-202ENST00000330852 TIMM17AQ99595 171 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms