RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PKD1L1Q8TDX9 2849 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 DNHD1Q96M86 4753 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 TRRAPQ9Y4A5 3859 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 PTTG1IPP53801 180 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 KIAA0087Q14695 138 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 C7orf33Q8WU49 177 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 SPANXB1Q9NS25 103 aaPredicted RBP3.39□□□□□ -1.87
LRIT3-201ENST00000327908 TRBV10-2A0A0K0K1G8 114 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 ZNF815PA8K554 130 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 COX6A2Q02221 97 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 IGLV5-37A0A075B6J1 123 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 NDUFC2O95298 119 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 TNP2Q05952 138 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 SLC25A34Q6PIV7 304 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 SCGB1D4Q6XE38 83 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 ZNF625Q96I27 306 aaPredicted RBP3.38□□□□□ -1.87
LRIT3-201ENST00000327908 SPANXDQ9BXN6 97 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 SPANXCQ9NY87 97 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 LOC107984156A0A0G2JMH3 177 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 HIGD2BQ4VC39 106 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 ARL17AQ8IVW1 177 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 Q8N3U1 123 aa3.38□□□□□ -1.87
LRIT3-201ENST00000327908 COX8AP10176 69 aa3.37□□□□□ -1.87
LRIT3-201ENST00000327908 LINC00158P58513 81 aa3.37□□□□□ -1.87
LRIT3-201ENST00000327908 DEFB104AQ8WTQ1 72 aa3.37□□□□□ -1.87
LRIT3-201ENST00000327908 DNAH6Q9C0G6 4158 aa3.37□□□□□ -1.87
LRIT3-201ENST00000327908 IGKV2D-26A0A0A0MRZ7 120 aa3.37□□□□□ -1.87
LRIT3-201ENST00000327908 SNCGO76070 127 aa3.37□□□□□ -1.87
LRIT3-201ENST00000327908 UQCR10Q9UDW1 63 aa3.37□□□□□ -1.87
LRIT3-201ENST00000327908 TSTD3H0UI37 97 aa3.37□□□□□ -1.87
LRIT3-201ENST00000327908 CDK2AP2O75956 126 aa3.37□□□□□ -1.87
LRIT3-201ENST00000327908 NKAPP1Q8N9T2 125 aa3.37□□□□□ -1.87
LRIT3-201ENST00000327908 A0A1B0GVY2 172 aa3.36□□□□□ -1.87
LRIT3-201ENST00000327908 SPATA45Q537H7 98 aa3.36□□□□□ -1.87
LRIT3-201ENST00000327908 Q6ZRU5 148 aa3.36□□□□□ -1.87
LRIT3-201ENST00000327908 M0R143 59 aa3.36□□□□□ -1.87
LRIT3-201ENST00000327908 GHRHP01286 108 aa3.36□□□□□ -1.87
LRIT3-201ENST00000327908 RPL18AQ02543 176 aaKnown RBP3.36□□□□□ -1.87
LRIT3-201ENST00000327908 DYNC2H1Q8NCM8 4307 aaKnown RBP3.36□□□□□ -1.87
LRIT3-201ENST00000327908 C6orf48Q9UBA6 75 aa3.36□□□□□ -1.87
LRIT3-201ENST00000327908 STAB2Q8WWQ8 2551 aa3.35□□□□□ -1.87
LRIT3-201ENST00000327908 TRAV13-2A0A0B4J235 113 aa3.35□□□□□ -1.87
LRIT3-201ENST00000327908 M0R378 163 aa3.35□□□□□ -1.87
LRIT3-201ENST00000327908 MAPKAPK5-AS1Q8N8E1 139 aa3.35□□□□□ -1.87
LRIT3-201ENST00000327908 PLAC8Q9NZF1 115 aa3.35□□□□□ -1.87
LRIT3-201ENST00000327908 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.35□□□□□ -1.87
LRIT3-201ENST00000327908 HINT1P49773 126 aaPredicted RBP3.35□□□□□ -1.87
LRIT3-201ENST00000327908 UNQ6190/PRO20217Q6UXQ8 127 aa3.35□□□□□ -1.87
LRIT3-201ENST00000327908 EPM2AB3EWF7 344 aa3.34□□□□□ -1.87
LRIT3-201ENST00000327908 H3BQ85 93 aa3.34□□□□□ -1.87
LRIT3-201ENST00000327908 PLA2G1BP04054 148 aaKnown RBP3.34□□□□□ -1.87
LRIT3-201ENST00000327908 HSD52Q0P140 79 aa3.34□□□□□ -1.87
LRIT3-201ENST00000327908 SRSF9Q13242 221 aaKnown RBP eCLIP3.34□□□□□ -1.87
LRIT3-201ENST00000327908 SDIM1Q6ZPB5 146 aa3.34□□□□□ -1.87
LRIT3-201ENST00000327908 Q6ZSA8 131 aa3.34□□□□□ -1.87
LRIT3-201ENST00000327908 SPACA4Q8TDM5 124 aa3.34□□□□□ -1.87
LRIT3-201ENST00000327908 LINC00526Q96FQ7 95 aa3.34□□□□□ -1.87
LRIT3-201ENST00000327908 DPH3Q96FX2 82 aa3.34□□□□□ -1.87
LRIT3-201ENST00000327908 TENM3Q9P273 2699 aa3.34□□□□□ -1.87
LRIT3-201ENST00000327908 PRYO14603 147 aa3.34□□□□□ -1.87
LRIT3-201ENST00000327908 GAGE2BQ13066 116 aa3.34□□□□□ -1.87
LRIT3-201ENST00000327908 LYRM7Q5U5X0 104 aa3.34□□□□□ -1.88
LRIT3-201ENST00000327908 A4D1N5 150 aa3.33□□□□□ -1.88
LRIT3-201ENST00000327908 MAJINQ3KP22 176 aa3.33□□□□□ -1.88
LRIT3-201ENST00000327908 STPG4Q8N801 248 aa3.33□□□□□ -1.88
LRIT3-201ENST00000327908 NHP2Q9NX24 153 aaKnown RBP3.33□□□□□ -1.88
LRIT3-201ENST00000327908 LECT2O14960 151 aa3.33□□□□□ -1.88
LRIT3-201ENST00000327908 ANKRD39Q53RE8 183 aa3.33□□□□□ -1.88
LRIT3-201ENST00000327908 TRBV7-6A0A0J9YX20 115 aa3.33□□□□□ -1.88
LRIT3-201ENST00000327908 FAM229AH3BQW9 127 aa3.33□□□□□ -1.88
LRIT3-201ENST00000327908 HNRNPA3P51991 378 aaKnown RBP3.33□□□□□ -1.88
LRIT3-201ENST00000327908 VAMP3Q15836 100 aa3.33□□□□□ -1.88
LRIT3-201ENST00000327908 C21orf62-AS1Q17RA5 79 aa3.33□□□□□ -1.88
LRIT3-201ENST00000327908 SND1-IT1Q9HBX3 110 aa3.33□□□□□ -1.88
LRIT3-201ENST00000327908 SMIM13P0DJ93 91 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 CTAG1AP78358 180 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 MIR7-3HGQ8N6C7 128 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 HIST1H4GQ99525 98 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 TMEM126AQ9H061 195 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 PAM16Q9Y3D7 125 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 PFN2P35080 140 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 PYY3Q5JQD4 70 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 A6NDN8 102 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 WFDC2Q14508 124 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 S100A7L2Q5SY68 101 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 C2orf82Q6UX34 121 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 Q6ZRP5 223 aa3.32□□□□□ -1.88
LRIT3-201ENST00000327908 ZNF706Q9Y5V0 76 aaPredicted RBP3.32□□□□□ -1.88
LRIT3-201ENST00000327908 LINC00308Q8TCZ7 52 aa3.31□□□□□ -1.88
LRIT3-201ENST00000327908 M0QXV9 152 aa3.31□□□□□ -1.88
LRIT3-201ENST00000327908 UBE2BP63146 152 aa3.31□□□□□ -1.88
LRIT3-201ENST00000327908 GAGE2EQ4V326 116 aa3.31□□□□□ -1.88
LRIT3-201ENST00000327908 ATOH7Q8N100 152 aa3.31□□□□□ -1.88
LRIT3-201ENST00000327908 GAGE2DQ9UEU5 116 aa3.31□□□□□ -1.88
LRIT3-201ENST00000327908 DNAH1Q9P2D7 4330 aa3.31□□□□□ -1.88
LRIT3-201ENST00000327908 A0A096LNI7 61 aa3.31□□□□□ -1.88
LRIT3-201ENST00000327908 A0A0B4J2C4 111 aa3.31□□□□□ -1.88
LRIT3-201ENST00000327908 TSPEAR-AS2P59090 65 aa3.31□□□□□ -1.88
LRIT3-201ENST00000327908 MRPL55Q7Z7F7 128 aaKnown RBP3.31□□□□□ -1.88
LRIT3-201ENST00000327908 INAFM2P0DMQ5 153 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms