RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 HILS1P60008 231 aa12.87□□□□□ -0.35
TRAPPC12-201ENST00000324266 LINC00308Q8TCZ7 52 aa12.86□□□□□ -0.35
TRAPPC12-201ENST00000324266 RPL28P46779 137 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-201ENST00000324266 FLNAP21333 2647 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-201ENST00000324266 C4orf3Q8WVX3 66 aa12.85□□□□□ -0.35
TRAPPC12-201ENST00000324266 SETD2Q9BYW2 2564 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-201ENST00000324266 C9orf129Q5T035 196 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-201ENST00000324266 JMJD1CQ15652 2540 aa12.85□□□□□ -0.35
TRAPPC12-201ENST00000324266 NF1P21359 2839 aa12.84□□□□□ -0.35
TRAPPC12-201ENST00000324266 ODF3L2Q3SX64 289 aa12.84□□□□□ -0.35
TRAPPC12-201ENST00000324266 C1orf158Q8N1D5 194 aa12.84□□□□□ -0.35
TRAPPC12-201ENST00000324266 IGLV5-39A0A0G2JS06 123 aa12.84□□□□□ -0.35
TRAPPC12-201ENST00000324266 LYPD5Q6UWN5 251 aa12.84□□□□□ -0.35
TRAPPC12-201ENST00000324266 SOSTDC1Q6X4U4 206 aa12.84□□□□□ -0.35
TRAPPC12-201ENST00000324266 C11orf44Q8N8P7 122 aa12.84□□□□□ -0.35
TRAPPC12-201ENST00000324266 TRAV23DV6A0A075B6W5 121 aa12.83□□□□□ -0.36
TRAPPC12-201ENST00000324266 NTM-AS1Q6ZSK4 140 aa12.83□□□□□ -0.36
TRAPPC12-201ENST00000324266 SMIM1B2RUZ4 78 aa12.83□□□□□ -0.36
TRAPPC12-201ENST00000324266 NIPBLQ6KC79 2804 aaeCLIP12.82□□□□□ -0.362e-7■■□□□ 12.9
TRAPPC12-201ENST00000324266 Q6ZTI0 123 aa12.82□□□□□ -0.36
TRAPPC12-201ENST00000324266 LINC00482Q8N8I6 264 aa12.81□□□□□ -0.36
TRAPPC12-201ENST00000324266 STHQ8IWL8 128 aa12.81□□□□□ -0.36
TRAPPC12-201ENST00000324266 ACANP16112 2415 aa12.8□□□□□ -0.36
TRAPPC12-201ENST00000324266 A0A1W2PRX2 142 aa12.8□□□□□ -0.36
TRAPPC12-201ENST00000324266 OBSCN-AS1Q96MR7 158 aa12.8□□□□□ -0.36
TRAPPC12-201ENST00000324266 LINC00474Q9P2X8 69 aa12.8□□□□□ -0.36
TRAPPC12-201ENST00000324266 RPL36AP83881 106 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-201ENST00000324266 RPL36ALQ969Q0 106 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-201ENST00000324266 FLNBO75369 2602 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-201ENST00000324266 K7EQD1 137 aa12.78□□□□□ -0.36
TRAPPC12-201ENST00000324266 COPS9Q8WXC6 57 aa12.78□□□□□ -0.36
TRAPPC12-201ENST00000324266 IL17DQ8TAD2 202 aa12.78□□□□□ -0.36
TRAPPC12-201ENST00000324266 WFDC9Q8NEX5 89 aa12.77□□□□□ -0.37
TRAPPC12-201ENST00000324266 CDC42SE2Q9NRR3 84 aa12.77□□□□□ -0.37
TRAPPC12-201ENST00000324266 NOP10Q9NPE3 64 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-201ENST00000324266 ATP5EP2Q5VTU8 51 aa12.75□□□□□ -0.37
TRAPPC12-201ENST00000324266 SETXQ7Z333 2677 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-201ENST00000324266 FAM19A1Q7Z5A9 133 aa12.75□□□□□ -0.37
TRAPPC12-201ENST00000324266 TRBV7-6A0A0J9YX20 115 aa12.74□□□□□ -0.37
TRAPPC12-201ENST00000324266 FAM19A3Q7Z5A8 133 aa12.74□□□□□ -0.37
TRAPPC12-201ENST00000324266 OTOGQ6ZRI0 2925 aa12.74□□□□□ -0.37
TRAPPC12-201ENST00000324266 LOC100131303A0A0U1RQF7 123 aa12.73□□□□□ -0.37
TRAPPC12-201ENST00000324266 CCKP06307 115 aa12.73□□□□□ -0.37
TRAPPC12-201ENST00000324266 KLKP1Q107X0 134 aa12.73□□□□□ -0.37
TRAPPC12-201ENST00000324266 OVOL2Q9BRP0 275 aa12.73□□□□□ -0.37
TRAPPC12-201ENST00000324266 TRBV10-1A0A0K0K1A3 114 aa12.72□□□□□ -0.37
TRAPPC12-201ENST00000324266 S100A7L2Q5SY68 101 aa12.72□□□□□ -0.37
TRAPPC12-201ENST00000324266 TRAV7A0A075B6U4 112 aa12.72□□□□□ -0.37
TRAPPC12-201ENST00000324266 IGKV3OR2-268A0A0C4DH90 116 aa12.72□□□□□ -0.37
TRAPPC12-201ENST00000324266 RBM3P98179 157 aaKnown RBP12.72□□□□□ -0.37
TRAPPC12-201ENST00000324266 SS18Q15532 418 aa12.72□□□□□ -0.37
TRAPPC12-201ENST00000324266 NCR3O14931 201 aa12.71□□□□□ -0.37
TRAPPC12-201ENST00000324266 C6orf226Q5I0X4 101 aa12.71□□□□□ -0.37
TRAPPC12-201ENST00000324266 ENHOQ6UWT2 76 aa12.71□□□□□ -0.37
TRAPPC12-201ENST00000324266 WFDC10AQ9H1F0 79 aa12.71□□□□□ -0.37
TRAPPC12-201ENST00000324266 A0A087WYN8 130 aa12.7□□□□□ -0.38
TRAPPC12-201ENST00000324266 UBE2L6O14933 153 aa12.7□□□□□ -0.38
TRAPPC12-201ENST00000324266 F8WEM9 126 aa12.7□□□□□ -0.38
TRAPPC12-201ENST00000324266 TOMM7Q9P0U1 55 aa12.69□□□□□ -0.38
TRAPPC12-201ENST00000324266 CCL24O00175 119 aa12.68□□□□□ -0.38
TRAPPC12-201ENST00000324266 RMI2Q96E14 147 aa12.68□□□□□ -0.38
TRAPPC12-201ENST00000324266 SNURFQ9Y675 71 aa12.68□□□□□ -0.38
TRAPPC12-201ENST00000324266 TRGV2A0A075B6R0 118 aa12.67□□□□□ -0.38
TRAPPC12-201ENST00000324266 GIG44P09565 113 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-201ENST00000324266 BCE1O60756 84 aa12.67□□□□□ -0.38
TRAPPC12-201ENST00000324266 MIR7-3HGQ8N6C7 128 aa12.66□□□□□ -0.38
TRAPPC12-201ENST00000324266 TRBV10-3A0A0K0K1G6 114 aa12.66□□□□□ -0.38
TRAPPC12-201ENST00000324266 PLAC8L1A1L4L8 177 aa12.65□□□□□ -0.38
TRAPPC12-201ENST00000324266 MTORP42345 2549 aa12.65□□□□□ -0.38
TRAPPC12-201ENST00000324266 TRAV13-2A0A0B4J235 113 aa12.65□□□□□ -0.38
TRAPPC12-201ENST00000324266 PMAIP1Q13794 54 aa12.65□□□□□ -0.38
TRAPPC12-201ENST00000324266 DNAJC9-AS1A6NH13 148 aa12.64□□□□□ -0.39
TRAPPC12-201ENST00000324266 PF4P02776 101 aa12.64□□□□□ -0.39
TRAPPC12-201ENST00000324266 KRTAP1-1Q07627 177 aa12.64□□□□□ -0.39
TRAPPC12-201ENST00000324266 LINC00337Q8N6G1 96 aa12.64□□□□□ -0.39
TRAPPC12-201ENST00000324266 COX7B2Q8TF08 81 aa12.64□□□□□ -0.39
TRAPPC12-201ENST00000324266 ATP5EP56381 51 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-201ENST00000324266 IGLV4-60A0A075B6I1 120 aa12.63□□□□□ -0.39
TRAPPC12-201ENST00000324266 CRPP02741 224 aa12.63□□□□□ -0.39
TRAPPC12-201ENST00000324266 FN1P02751 2386 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-201ENST00000324266 IGKV2-28A0A075B6P5 120 aa12.62□□□□□ -0.39
TRAPPC12-201ENST00000324266 IGKV2D-28P01615 120 aa12.62□□□□□ -0.39
TRAPPC12-201ENST00000324266 SMR3AQ99954 134 aa12.62□□□□□ -0.39
TRAPPC12-201ENST00000324266 SND1-IT1Q9HBX3 110 aa12.62□□□□□ -0.39
TRAPPC12-201ENST00000324266 ESM1Q9NQ30 184 aa12.62□□□□□ -0.39
TRAPPC12-201ENST00000324266 BAHCC1Q9P281 2608 aa12.62□□□□□ -0.39
TRAPPC12-201ENST00000324266 LINC00158P58513 81 aa12.61□□□□□ -0.39
TRAPPC12-201ENST00000324266 TRGV4A0A0C4DH28 118 aa12.61□□□□□ -0.39
TRAPPC12-201ENST00000324266 MPLKIPQ8TAP9 179 aa12.61□□□□□ -0.39
TRAPPC12-201ENST00000324266 LECT2O14960 151 aa12.6□□□□□ -0.39
TRAPPC12-201ENST00000324266 ANK3Q12955 4377 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-201ENST00000324266 C16orf74Q96GX8 76 aa12.6□□□□□ -0.39
TRAPPC12-201ENST00000324266 H0YGX0 51 aa12.59□□□□□ -0.39
TRAPPC12-201ENST00000324266 NDUFC1O43677 76 aa12.59□□□□□ -0.39
TRAPPC12-201ENST00000324266 FAM229BQ4G0N7 80 aa12.59□□□□□ -0.39
TRAPPC12-201ENST00000324266 SMIM11BQ8TCY0 68 aa12.59□□□□□ -0.39
TRAPPC12-201ENST00000324266 HIVEP1P15822 2718 aa12.58□□□□□ -0.4
TRAPPC12-201ENST00000324266 TRBV6-4A0A1B0GX49 114 aa12.58□□□□□ -0.4
TRAPPC12-201ENST00000324266 SLPIP03973 132 aa12.57□□□□□ -0.4
TRAPPC12-201ENST00000324266 CCL18P55774 89 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms