RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 LELP1Q5T871 98 aa10.41□□□□□ -0.74
TCOF1-201ENST00000323668 Q8N814 137 aa10.41□□□□□ -0.74
TCOF1-201ENST00000323668 EPG5Q9HCE0 2579 aa10.41□□□□□ -0.74
TCOF1-201ENST00000323668 PLA2G2AP14555 144 aa10.41□□□□□ -0.74
TCOF1-201ENST00000323668 KLK5Q9Y337 293 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-201ENST00000323668 TMEM258P61165 79 aa10.4□□□□□ -0.74
TCOF1-201ENST00000323668 A0A1B0GUV1 79 aa10.4□□□□□ -0.74
TCOF1-201ENST00000323668 C9orf116Q5BN46 136 aaPredicted RBP10.4□□□□□ -0.74
TCOF1-201ENST00000323668 MUC7Q8TAX7 377 aa10.4□□□□□ -0.74
TCOF1-201ENST00000323668 UNQ6190/PRO20217Q6UXQ8 127 aa10.4□□□□□ -0.74
TCOF1-201ENST00000323668 A0A087WVE0 104 aa10.4□□□□□ -0.75
TCOF1-201ENST00000323668 CYSRT1A8MQ03 144 aa10.4□□□□□ -0.75
TCOF1-201ENST00000323668 SPEGQ15772 3267 aa10.39□□□□□ -0.75
TCOF1-201ENST00000323668 FHL3Q13643 280 aa10.39□□□□□ -0.75
TCOF1-201ENST00000323668 SCXQ7RTU7 201 aa10.38□□□□□ -0.75
TCOF1-201ENST00000323668 FRYQ5TBA9 3013 aa10.38□□□□□ -0.75
TCOF1-201ENST00000323668 LINC00846Q9NV44 126 aa10.37□□□□□ -0.75
TCOF1-201ENST00000323668 BPY2O14599 106 aa10.37□□□□□ -0.75
TCOF1-201ENST00000323668 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-201ENST00000323668 WFDC9Q8NEX5 89 aa10.37□□□□□ -0.75
TCOF1-201ENST00000323668 FRYLO94915 3013 aa10.37□□□□□ -0.75
TCOF1-201ENST00000323668 NDUFC2O95298 119 aa10.37□□□□□ -0.75
TCOF1-201ENST00000323668 FAM218AQ96MZ4 157 aa10.36□□□□□ -0.75
TCOF1-201ENST00000323668 FAM236DA0A1B0GTK5 79 aa10.35□□□□□ -0.75
TCOF1-201ENST00000323668 FAM236CP0DP71 79 aa10.35□□□□□ -0.75
TCOF1-201ENST00000323668 C16orf95Q9H693 158 aa10.35□□□□□ -0.75
TCOF1-201ENST00000323668 ZNF73O43830 326 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-201ENST00000323668 A8MTW9 85 aa10.34□□□□□ -0.75
TCOF1-201ENST00000323668 INAFM1C9JVW0 142 aa10.34□□□□□ -0.75
TCOF1-201ENST00000323668 CENPEQ02224 2701 aa10.34□□□□□ -0.75
TCOF1-201ENST00000323668 EIF4EBP3O60516 100 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-201ENST00000323668 MRAPQ8TCY5 172 aa10.33□□□□□ -0.76
TCOF1-201ENST00000323668 M0R378 163 aa10.33□□□□□ -0.76
TCOF1-201ENST00000323668 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-201ENST00000323668 LINC01561Q8N1V8 128 aa10.32□□□□□ -0.76
TCOF1-201ENST00000323668 SYCNQ0VAF6 134 aa10.32□□□□□ -0.76
TCOF1-201ENST00000323668 FSHBP01225 129 aa10.32□□□□□ -0.76
TCOF1-201ENST00000323668 C11orf45Q8TAV5 145 aa10.32□□□□□ -0.76
TCOF1-201ENST00000323668 KPRPQ5T749 579 aaPredicted RBP10.31□□□□□ -0.76
TCOF1-201ENST00000323668 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
TCOF1-201ENST00000323668 DEFB131BA0A096LNP1 70 aa10.3□□□□□ -0.76
TCOF1-201ENST00000323668 TRBV10-3A0A0K0K1G6 114 aa10.3□□□□□ -0.76
TCOF1-201ENST00000323668 LY6G6DO95868 133 aa10.3□□□□□ -0.76
TCOF1-201ENST00000323668 REV3LO60673 3130 aa10.3□□□□□ -0.76
TCOF1-201ENST00000323668 C6orf223Q8N319 242 aa10.27□□□□□ -0.76
TCOF1-201ENST00000323668 FASNP49327 2511 aaKnown RBP10.27□□□□□ -0.77
TCOF1-201ENST00000323668 LINC00575Q6W349 94 aa10.27□□□□□ -0.77
TCOF1-201ENST00000323668 IGKV2-28A0A075B6P5 120 aa10.27□□□□□ -0.77
TCOF1-201ENST00000323668 IGKV2D-28P01615 120 aa10.27□□□□□ -0.77
TCOF1-201ENST00000323668 SNURFQ9Y675 71 aa10.27□□□□□ -0.77
TCOF1-201ENST00000323668 SMR3AQ99954 134 aa10.26□□□□□ -0.77
TCOF1-201ENST00000323668 IGHV4-30-4P0DP06 118 aa10.26□□□□□ -0.77
TCOF1-201ENST00000323668 FAM19A1Q7Z5A9 133 aa10.26□□□□□ -0.77
TCOF1-201ENST00000323668 C3orf84H3BNL1 204 aa10.26□□□□□ -0.77
TCOF1-201ENST00000323668 EGFEM1PQ0D2K5 195 aa10.26□□□□□ -0.77
TCOF1-201ENST00000323668 C5orf47Q569G3 176 aa10.26□□□□□ -0.77
TCOF1-201ENST00000323668 AKAP13Q12802 2813 aa10.26□□□□□ -0.77
TCOF1-201ENST00000323668 TRAV7A0A075B6U4 112 aa10.25□□□□□ -0.77
TCOF1-201ENST00000323668 MP68P56378 58 aa10.24□□□□□ -0.77
TCOF1-201ENST00000323668 NDUFC1O43677 76 aa10.24□□□□□ -0.77
TCOF1-201ENST00000323668 FAM19A3Q7Z5A8 133 aa10.24□□□□□ -0.77
TCOF1-201ENST00000323668 MAP1AP78559 2803 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-201ENST00000323668 NHLRC4P0CG21 123 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-201ENST00000323668 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.77
TCOF1-201ENST00000323668 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
TCOF1-201ENST00000323668 CRYGAP11844 174 aa10.2□□□□□ -0.78
TCOF1-201ENST00000323668 HIGD2AQ9BW72 106 aa10.2□□□□□ -0.78
TCOF1-201ENST00000323668 DHRS4-AS1Q9P1J3 65 aa10.2□□□□□ -0.78
TCOF1-201ENST00000323668 A0A096LNT2 108 aa10.2□□□□□ -0.78
TCOF1-201ENST00000323668 Q6ZVQ6 151 aa10.19□□□□□ -0.78
TCOF1-201ENST00000323668 Q8N3U1 123 aa10.19□□□□□ -0.78
TCOF1-201ENST00000323668 SMCR5Q8TEV8 140 aa10.19□□□□□ -0.78
TCOF1-201ENST00000323668 EYSQ5T1H1 3165 aa10.19□□□□□ -0.78
TCOF1-201ENST00000323668 LOC107984640A0A0U1RRK4 108 aa10.18□□□□□ -0.78
TCOF1-201ENST00000323668 FAM19A5Q7Z5A7 132 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-201ENST00000323668 SPTBN5Q9NRC6 3674 aaKnown RBP10.18□□□□□ -0.78
TCOF1-201ENST00000323668 BOD1L1Q8NFC6 3051 aa10.17□□□□□ -0.78
TCOF1-201ENST00000323668 NDUFC2-KCTD14E9PQ53 114 aa10.17□□□□□ -0.78
TCOF1-201ENST00000323668 OXLD1Q5BKU9 147 aa10.17□□□□□ -0.78
TCOF1-201ENST00000323668 LYPD5Q6UWN5 251 aa10.17□□□□□ -0.78
TCOF1-201ENST00000323668 X6R8D5 127 aa10.17□□□□□ -0.78
TCOF1-201ENST00000323668 FREM2Q5SZK8 3169 aa10.17□□□□□ -0.78
TCOF1-201ENST00000323668 LINC01547P58512 204 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-201ENST00000323668 ADGRG4Q8IZF6 3080 aa10.17□□□□□ -0.78
TCOF1-201ENST00000323668 UBE2AP49459 152 aa10.16□□□□□ -0.78
TCOF1-201ENST00000323668 ATP5EP56381 51 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-201ENST00000323668 RPL37AP8A6NKH3 93 aa10.16□□□□□ -0.78
TCOF1-201ENST00000323668 NDUFB1O75438 58 aa10.16□□□□□ -0.78
TCOF1-201ENST00000323668 PKIGQ9Y2B9 76 aa10.16□□□□□ -0.78
TCOF1-201ENST00000323668 PRB2P02812 416 aaPredicted RBP10.15□□□□□ -0.78
TCOF1-201ENST00000323668 IL17DQ8TAD2 202 aa10.15□□□□□ -0.78
TCOF1-201ENST00000323668 C10orf25Q5T742 122 aa10.14□□□□□ -0.79
TCOF1-201ENST00000323668 WFDC10BQ8IUB3 73 aa10.14□□□□□ -0.79
TCOF1-201ENST00000323668 Q6ZTC4 211 aa10.13□□□□□ -0.79
TCOF1-201ENST00000323668 CELA1Q9UNI1 258 aa10.13□□□□□ -0.79
TCOF1-201ENST00000323668 NANOS2P60321 138 aaKnown RBP10.13□□□□□ -0.79
TCOF1-201ENST00000323668 TRAV10A0A0B4J240 114 aa10.13□□□□□ -0.79
TCOF1-201ENST00000323668 CSNK1G2-AS1Q8NCQ2 148 aa10.13□□□□□ -0.79
TCOF1-201ENST00000323668 MPLKIPQ8TAP9 179 aa10.13□□□□□ -0.79
TCOF1-201ENST00000323668 BRK1Q8WUW1 75 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms