RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ACANP16112 2415 aa12.54□□□□□ -0.4
PRKCB-202ENST00000321728 TRBV6-4A0A1B0GX49 114 aa12.53□□□□□ -0.4
PRKCB-202ENST00000321728 C6orf226Q5I0X4 101 aa12.53□□□□□ -0.4
PRKCB-202ENST00000321728 DSCR8Q96T75 97 aa12.53□□□□□ -0.4
PRKCB-202ENST00000321728 FN1P02751 2386 aaKnown RBP12.53□□□□□ -0.4
PRKCB-202ENST00000321728 CCKP06307 115 aa12.53□□□□□ -0.4
PRKCB-202ENST00000321728 ITPR3Q14573 2671 aa12.52□□□□□ -0.4
PRKCB-202ENST00000321728 A0A087WZ39 114 aa12.52□□□□□ -0.41
PRKCB-202ENST00000321728 A0A096LNT2 108 aa12.52□□□□□ -0.41
PRKCB-202ENST00000321728 TRGV4A0A0C4DH28 118 aa12.52□□□□□ -0.41
PRKCB-202ENST00000321728 CR1P17927 2039 aa12.52□□□□□ -0.41
PRKCB-202ENST00000321728 SS18Q15532 418 aa12.52□□□□□ -0.41
PRKCB-202ENST00000321728 HILS1P60008 231 aa12.51□□□□□ -0.41
PRKCB-202ENST00000321728 WFDC9Q8NEX5 89 aa12.51□□□□□ -0.41
PRKCB-202ENST00000321728 FLNAP21333 2647 aaKnown RBP12.5□□□□□ -0.41
PRKCB-202ENST00000321728 USP24Q9UPU5 2620 aa12.5□□□□□ -0.41
PRKCB-202ENST00000321728 TRBV6-8A0A0A6YYG3 113 aa12.5□□□□□ -0.41
PRKCB-202ENST00000321728 IGHV4-31P0DP07 118 aa12.49□□□□□ -0.41
PRKCB-202ENST00000321728 S100A7L2Q5SY68 101 aa12.48□□□□□ -0.41
PRKCB-202ENST00000321728 APCP25054 2843 aa12.48□□□□□ -0.41
PRKCB-202ENST00000321728 TRAV23DV6A0A075B6W5 121 aa12.48□□□□□ -0.41
PRKCB-202ENST00000321728 LY6G6DO95868 133 aa12.48□□□□□ -0.41
PRKCB-202ENST00000321728 TMEM86BQ8N661 226 aa12.48□□□□□ -0.41
PRKCB-202ENST00000321728 PLA2G2AP14555 144 aa12.47□□□□□ -0.41
PRKCB-202ENST00000321728 GHRHP01286 108 aa12.47□□□□□ -0.41
PRKCB-202ENST00000321728 PRR3P79522 188 aaKnown RBP12.47□□□□□ -0.41
PRKCB-202ENST00000321728 WFDC10AQ9H1F0 79 aa12.47□□□□□ -0.41
PRKCB-202ENST00000321728 JMJD7-PLA2G4BH0Y9G9 81 aa12.46□□□□□ -0.41
PRKCB-202ENST00000321728 RNASE1P07998 156 aaKnown RBP12.46□□□□□ -0.41
PRKCB-202ENST00000321728 XCL1P47992 114 aa12.46□□□□□ -0.41
PRKCB-202ENST00000321728 NBEAL2Q6ZNJ1 2754 aa12.46□□□□□ -0.41
PRKCB-202ENST00000321728 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.41
PRKCB-202ENST00000321728 C16orf74Q96GX8 76 aa12.46□□□□□ -0.41
PRKCB-202ENST00000321728 LINC00959A0A1B0GUT2 108 aa12.45□□□□□ -0.42
PRKCB-202ENST00000321728 OXTP01178 125 aa12.45□□□□□ -0.42
PRKCB-202ENST00000321728 FSHBP01225 129 aa12.45□□□□□ -0.42
PRKCB-202ENST00000321728 PLAC8L1A1L4L8 177 aa12.45□□□□□ -0.42
PRKCB-202ENST00000321728 ENHOQ6UWT2 76 aa12.45□□□□□ -0.42
PRKCB-202ENST00000321728 FAM19A1Q7Z5A9 133 aa12.45□□□□□ -0.42
PRKCB-202ENST00000321728 Q8N814 137 aa12.45□□□□□ -0.42
PRKCB-202ENST00000321728 FHL2Q14192 279 aa12.45□□□□□ -0.42
PRKCB-202ENST00000321728 GCN1Q92616 2671 aaKnown RBP12.44□□□□□ -0.42
PRKCB-202ENST00000321728 RPL35AP18077 110 aaKnown RBP12.44□□□□□ -0.42
PRKCB-202ENST00000321728 TMEM256-PLSCR3K7ERE1 68 aa12.43□□□□□ -0.42
PRKCB-202ENST00000321728 GIG44P09565 113 aaPredicted RBP12.43□□□□□ -0.42
PRKCB-202ENST00000321728 ATP5EP2Q5VTU8 51 aa12.42□□□□□ -0.42
PRKCB-202ENST00000321728 CLPSL2Q6UWE3 100 aa12.42□□□□□ -0.42
PRKCB-202ENST00000321728 LINC00167Q96N53 147 aa12.42□□□□□ -0.42
PRKCB-202ENST00000321728 NANOS2P60321 138 aaKnown RBP12.41□□□□□ -0.42
PRKCB-202ENST00000321728 UBL5Q9BZL1 73 aa12.4□□□□□ -0.42
PRKCB-202ENST00000321728 CCL24O00175 119 aa12.39□□□□□ -0.43
PRKCB-202ENST00000321728 C4orf26Q17RF5 130 aa12.39□□□□□ -0.43
PRKCB-202ENST00000321728 Q8IZM0 81 aa12.38□□□□□ -0.43
PRKCB-202ENST00000321728 C20orf197Q8N268 126 aa12.38□□□□□ -0.43
PRKCB-202ENST00000321728 UBR5O95071 2799 aaPredicted RBP12.38□□□□□ -0.43
PRKCB-202ENST00000321728 NDUFC2O95298 119 aa12.36□□□□□ -0.43
PRKCB-202ENST00000321728 DEFB130BP0DP73 79 aa12.36□□□□□ -0.43
PRKCB-202ENST00000321728 DEFB130AP0DP74 79 aa12.36□□□□□ -0.43
PRKCB-202ENST00000321728 C6orf99Q4VX62 202 aa12.35□□□□□ -0.43
PRKCB-202ENST00000321728 LYPD5Q6UWN5 251 aa12.35□□□□□ -0.43
PRKCB-202ENST00000321728 HRCT1Q6UXD1 115 aa12.34□□□□□ -0.43
PRKCB-202ENST00000321728 BBC3Q96PG8 261 aaPredicted RBP12.34□□□□□ -0.43
PRKCB-202ENST00000321728 Q5XG85 94 aa12.33□□□□□ -0.44
PRKCB-202ENST00000321728 TRBV10-3A0A0K0K1G6 114 aa12.32□□□□□ -0.44
PRKCB-202ENST00000321728 NDUFC2-KCTD14E9PQ53 114 aa12.32□□□□□ -0.44
PRKCB-202ENST00000321728 GYPEP15421 78 aa12.32□□□□□ -0.44
PRKCB-202ENST00000321728 A0A096LPF7 62 aa12.32□□□□□ -0.44
PRKCB-202ENST00000321728 C9orf116Q5BN46 136 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-202ENST00000321728 CSNK1G2-AS1Q8NCQ2 148 aa12.32□□□□□ -0.44
PRKCB-202ENST00000321728 RBM3P98179 157 aaKnown RBP12.31□□□□□ -0.44
PRKCB-202ENST00000321728 LAMTOR3Q9UHA4 124 aa12.31□□□□□ -0.44
PRKCB-202ENST00000321728 DNAJC9-AS1A6NH13 148 aa12.3□□□□□ -0.44
PRKCB-202ENST00000321728 CMC4P56277 68 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-202ENST00000321728 FAM236DA0A1B0GTK5 79 aa12.29□□□□□ -0.44
PRKCB-202ENST00000321728 FAM236CP0DP71 79 aa12.29□□□□□ -0.44
PRKCB-202ENST00000321728 ESM1Q9NQ30 184 aa12.29□□□□□ -0.44
PRKCB-202ENST00000321728 DEFB113Q30KQ7 82 aa12.29□□□□□ -0.44
PRKCB-202ENST00000321728 IGLV10-54A0A075B6I4 117 aa12.28□□□□□ -0.44
PRKCB-202ENST00000321728 A0A1B0GUV1 79 aa12.28□□□□□ -0.44
PRKCB-202ENST00000321728 HAMPP81172 84 aa12.28□□□□□ -0.44
PRKCB-202ENST00000321728 Q6ZQT0 140 aa12.28□□□□□ -0.44
PRKCB-202ENST00000321728 WIPF1O43516 503 aa12.28□□□□□ -0.44
PRKCB-202ENST00000321728 COX17Q14061 63 aa12.28□□□□□ -0.44
PRKCB-202ENST00000321728 LINC00575Q6W349 94 aa12.28□□□□□ -0.44
PRKCB-202ENST00000321728 LINC00269Q8N2A0 174 aa12.28□□□□□ -0.44
PRKCB-202ENST00000321728 WFDC11Q8NEX6 87 aa12.27□□□□□ -0.44
PRKCB-202ENST00000321728 KIAA0087Q14695 138 aa12.27□□□□□ -0.45
PRKCB-202ENST00000321728 Q8NDZ9 215 aa12.27□□□□□ -0.45
PRKCB-202ENST00000321728 ITPR2Q14571 2701 aa12.26□□□□□ -0.45
PRKCB-202ENST00000321728 ZNF561-AS1K7EIQ3 104 aa12.25□□□□□ -0.45
PRKCB-202ENST00000321728 M0R2N4 97 aa12.25□□□□□ -0.45
PRKCB-202ENST00000321728 C19orf73Q9NVV2 129 aa12.25□□□□□ -0.45
PRKCB-202ENST00000321728 LINC01547P58512 204 aaPredicted RBP12.25□□□□□ -0.45
PRKCB-202ENST00000321728 TRAV7A0A075B6U4 112 aa12.24□□□□□ -0.45
PRKCB-202ENST00000321728 CD164L2Q6UWJ8 174 aa12.24□□□□□ -0.45
PRKCB-202ENST00000321728 CHCHD10Q8WYQ3 142 aaPredicted RBP12.24□□□□□ -0.45
PRKCB-202ENST00000321728 VWFP04275 2813 aa12.24□□□□□ -0.45
PRKCB-202ENST00000321728 TENM4Q6N022 2769 aa12.24□□□□□ -0.45
PRKCB-202ENST00000321728 LOC110117498A0A087WWA1 95 aa12.23□□□□□ -0.45
PRKCB-202ENST00000321728 H7BZZ5 65 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms