RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
CAPN3-201ENST00000318023 KRTAP10-11P60412 298 aa6.73□□□□□ -1.33
CAPN3-201ENST00000318023 XCL1P47992 114 aa6.73□□□□□ -1.33
CAPN3-201ENST00000318023 SS18Q15532 418 aa6.73□□□□□ -1.33
CAPN3-201ENST00000318023 FAM19A1Q7Z5A9 133 aa6.73□□□□□ -1.33
CAPN3-201ENST00000318023 LINC00308Q8TCZ7 52 aa6.73□□□□□ -1.33
CAPN3-201ENST00000318023 C4orf3Q8WVX3 66 aa6.73□□□□□ -1.33
CAPN3-201ENST00000318023 XCL2Q9UBD3 114 aa6.73□□□□□ -1.33
CAPN3-201ENST00000318023 PRKDCP78527 4128 aaKnown RBP6.73□□□□□ -1.33
CAPN3-201ENST00000318023 NCR3O14931 201 aa6.72□□□□□ -1.33
CAPN3-201ENST00000318023 SOSTDC1Q6X4U4 206 aa6.72□□□□□ -1.33
CAPN3-201ENST00000318023 KLK9Q9UKQ9 250 aa6.72□□□□□ -1.33
CAPN3-201ENST00000318023 H7BZZ5 65 aa6.72□□□□□ -1.33
CAPN3-201ENST00000318023 SNURFQ9Y675 71 aa6.72□□□□□ -1.33
CAPN3-201ENST00000318023 FAM222AQ5U5X8 452 aa6.71□□□□□ -1.33
CAPN3-201ENST00000318023 LYPD5Q6UWN5 251 aa6.71□□□□□ -1.33
CAPN3-201ENST00000318023 NDUFC2-KCTD14E9PQ53 114 aa6.71□□□□□ -1.34
CAPN3-201ENST00000318023 MRPS36P82909 103 aaKnown RBP6.71□□□□□ -1.34
CAPN3-201ENST00000318023 CMYA5Q8N3K9 4069 aa6.71□□□□□ -1.34
CAPN3-201ENST00000318023 A0A087WYN8 130 aa6.7□□□□□ -1.34
CAPN3-201ENST00000318023 EPM2AB3EWF7 344 aa6.7□□□□□ -1.34
CAPN3-201ENST00000318023 UNQ9165/PRO28630Q6UXU0 137 aa6.7□□□□□ -1.34
CAPN3-201ENST00000318023 FAM104AQ969W3 186 aa6.7□□□□□ -1.34
CAPN3-201ENST00000318023 KNCNA6PVL3 124 aa6.7□□□□□ -1.34
CAPN3-201ENST00000318023 M0QY20 66 aa6.7□□□□□ -1.34
CAPN3-201ENST00000318023 C19orf54Q5BKX5 351 aa6.7□□□□□ -1.34
CAPN3-201ENST00000318023 ENHOQ6UWT2 76 aa6.7□□□□□ -1.34
CAPN3-201ENST00000318023 Q9H8V8 135 aa6.7□□□□□ -1.34
CAPN3-201ENST00000318023 PIK3CD-AS1Q5SR53 167 aa6.69□□□□□ -1.34
CAPN3-201ENST00000318023 CCDC140Q96MF4 163 aa6.69□□□□□ -1.34
CAPN3-201ENST00000318023 TENM3Q9P273 2699 aa6.69□□□□□ -1.34
CAPN3-201ENST00000318023 WFDC10AQ9H1F0 79 aa6.69□□□□□ -1.34
CAPN3-201ENST00000318023 CDKN2A-AS1Q9UH64 79 aa6.69□□□□□ -1.34
CAPN3-201ENST00000318023 SMIM26A0A096LP01 95 aa6.69□□□□□ -1.34
CAPN3-201ENST00000318023 IGHV3-73A0A0B4J1V6 119 aa6.69□□□□□ -1.34
CAPN3-201ENST00000318023 MPLKIPQ8TAP9 179 aa6.69□□□□□ -1.34
CAPN3-201ENST00000318023 DYNLRB2Q8TF09 96 aa6.69□□□□□ -1.34
CAPN3-201ENST00000318023 MRPL53Q96EL3 112 aaKnown RBP6.69□□□□□ -1.34
CAPN3-201ENST00000318023 SLPIP03973 132 aa6.68□□□□□ -1.34
CAPN3-201ENST00000318023 RBM3P98179 157 aaKnown RBP6.68□□□□□ -1.34
CAPN3-201ENST00000318023 RMI2Q96E14 147 aa6.68□□□□□ -1.34
CAPN3-201ENST00000318023 K7EIL1 84 aa6.68□□□□□ -1.34
CAPN3-201ENST00000318023 TRBV6-5A0A0K0K1A5 114 aa6.67□□□□□ -1.34
CAPN3-201ENST00000318023 MED14OSP0DP75 135 aa6.67□□□□□ -1.34
CAPN3-201ENST00000318023 F8WEM9 126 aa6.67□□□□□ -1.34
CAPN3-201ENST00000318023 LENEPQ9Y5L5 61 aa6.67□□□□□ -1.34
CAPN3-201ENST00000318023 COL7A1Q02388 2944 aa6.66□□□□□ -1.34
CAPN3-201ENST00000318023 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-201ENST00000318023 IGKV2-29A2NJV5 120 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-201ENST00000318023 TIMM17BO60830 172 aa6.66□□□□□ -1.34
CAPN3-201ENST00000318023 C9orf66Q5T8R8 295 aa6.66□□□□□ -1.34
CAPN3-201ENST00000318023 USMG5Q96IX5 58 aa6.66□□□□□ -1.34
CAPN3-201ENST00000318023 NDUFA1O15239 70 aa6.66□□□□□ -1.34
CAPN3-201ENST00000318023 TRBV7-6A0A0J9YX20 115 aa6.65□□□□□ -1.34
CAPN3-201ENST00000318023 SOCS3O14543 225 aa6.65□□□□□ -1.34
CAPN3-201ENST00000318023 Q9UF83 564 aa6.65□□□□□ -1.34
CAPN3-201ENST00000318023 LECT2O14960 151 aa6.65□□□□□ -1.35
CAPN3-201ENST00000318023 IGKV3-20P01619 116 aa6.65□□□□□ -1.35
CAPN3-201ENST00000318023 CCKP06307 115 aa6.65□□□□□ -1.35
CAPN3-201ENST00000318023 FAM229BQ4G0N7 80 aa6.64□□□□□ -1.35
CAPN3-201ENST00000318023 MIR7-3HGQ8N6C7 128 aa6.64□□□□□ -1.35
CAPN3-201ENST00000318023 COX6A2Q02221 97 aa6.63□□□□□ -1.35
CAPN3-201ENST00000318023 S100A7L2Q5SY68 101 aa6.63□□□□□ -1.35
CAPN3-201ENST00000318023 LINC00337Q8N6G1 96 aa6.63□□□□□ -1.35
CAPN3-201ENST00000318023 H3BUA1 57 aa6.63□□□□□ -1.35
CAPN3-201ENST00000318023 CRPP02741 224 aa6.63□□□□□ -1.35
CAPN3-201ENST00000318023 IGHV3-38A0A0C4DH36 116 aa6.62□□□□□ -1.35
CAPN3-201ENST00000318023 SMIM11BQ8TCY0 68 aa6.61□□□□□ -1.35
CAPN3-201ENST00000318023 OBSCN-AS1Q96MR7 158 aa6.61□□□□□ -1.35
CAPN3-201ENST00000318023 RETNQ9HD89 108 aa6.61□□□□□ -1.35
CAPN3-201ENST00000318023 HTN1P15515 57 aa6.61□□□□□ -1.35
CAPN3-201ENST00000318023 SNRPD3P62318 126 aaKnown RBP6.61□□□□□ -1.35
CAPN3-201ENST00000318023 LINC00467Q9BRT7 94 aa6.61□□□□□ -1.35
CAPN3-201ENST00000318023 TRAV10A0A0B4J240 114 aa6.6□□□□□ -1.35
CAPN3-201ENST00000318023 APRG1Q8IVJ8 170 aa6.6□□□□□ -1.35
CAPN3-201ENST00000318023 C11orf72Q8NBR9 251 aa6.6□□□□□ -1.35
CAPN3-201ENST00000318023 RHPN1-AS1Q9BWJ2 59 aa6.6□□□□□ -1.35
CAPN3-201ENST00000318023 U3KQE9 123 aa6.6□□□□□ -1.35
CAPN3-201ENST00000318023 IGHV3-16A0A0C4DH30 117 aa6.6□□□□□ -1.35
CAPN3-201ENST00000318023 IGHV4-30-4P0DP06 118 aa6.6□□□□□ -1.35
CAPN3-201ENST00000318023 RPL36AP83881 106 aaKnown RBP6.6□□□□□ -1.35
CAPN3-201ENST00000318023 RPL36ALQ969Q0 106 aaKnown RBP6.6□□□□□ -1.35
CAPN3-201ENST00000318023 IGLV1-51P01701 117 aa6.59□□□□□ -1.35
CAPN3-201ENST00000318023 DEFB114Q30KQ6 69 aa6.59□□□□□ -1.35
CAPN3-201ENST00000318023 IGKV2-28A0A075B6P5 120 aa6.59□□□□□ -1.35
CAPN3-201ENST00000318023 TRAV7A0A075B6U4 112 aa6.59□□□□□ -1.35
CAPN3-201ENST00000318023 IGKV2D-28P01615 120 aa6.59□□□□□ -1.35
CAPN3-201ENST00000318023 KLKP1Q107X0 134 aa6.59□□□□□ -1.35
CAPN3-201ENST00000318023 Q6ZTI0 123 aa6.59□□□□□ -1.35
CAPN3-201ENST00000318023 TENM2Q9NT68 2774 aa6.59□□□□□ -1.35
CAPN3-201ENST00000318023 KLLNB2CW77 178 aa6.59□□□□□ -1.36
CAPN3-201ENST00000318023 TRAV13-2A0A0B4J235 113 aa6.58□□□□□ -1.36
CAPN3-201ENST00000318023 CHCHD7Q9BUK0 85 aa6.58□□□□□ -1.36
CAPN3-201ENST00000318023 EGFEM1PQ0D2K5 195 aa6.58□□□□□ -1.36
CAPN3-201ENST00000318023 A0A087WZ39 114 aa6.57□□□□□ -1.36
CAPN3-201ENST00000318023 PMAIP1Q13794 54 aa6.57□□□□□ -1.36
CAPN3-201ENST00000318023 COPS9Q8WXC6 57 aa6.57□□□□□ -1.36
CAPN3-201ENST00000318023 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
CAPN3-201ENST00000318023 KPRPQ5T749 579 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-201ENST00000318023 DGAT2L7PQ6IED9 249 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms