RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 SYCNQ0VAF6 134 aa6.37□□□□□ -1.39
USF3-201ENST00000316407 LINC00482Q8N8I6 264 aa6.37□□□□□ -1.39
USF3-201ENST00000316407 CIRBP-AS1Q8TBR5 109 aa6.37□□□□□ -1.39
USF3-201ENST00000316407 PRORYQ9H606 182 aa6.37□□□□□ -1.39
USF3-201ENST00000316407 LINC00846Q9NV44 126 aa6.37□□□□□ -1.39
USF3-201ENST00000316407 K7EQG2 157 aa6.37□□□□□ -1.39
USF3-201ENST00000316407 DEFB113Q30KQ7 82 aa6.37□□□□□ -1.39
USF3-201ENST00000316407 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.36□□□□□ -1.39
USF3-201ENST00000316407 IGLV2-18A0A075B6J9 118 aa6.36□□□□□ -1.39
USF3-201ENST00000316407 IGIPA6NJ69 53 aa6.36□□□□□ -1.39
USF3-201ENST00000316407 LINC00959A0A1B0GUT2 108 aa6.36□□□□□ -1.39
USF3-201ENST00000316407 PLAC8L1A1L4L8 177 aa6.36□□□□□ -1.39
USF3-201ENST00000316407 IGLV8-61A0A075B6I0 122 aa6.35□□□□□ -1.39
USF3-201ENST00000316407 TRBV6-4A0A1B0GX49 114 aa6.35□□□□□ -1.39
USF3-201ENST00000316407 CYSRT1A8MQ03 144 aa6.35□□□□□ -1.39
USF3-201ENST00000316407 ODF3BA8MYP8 253 aa6.35□□□□□ -1.39
USF3-201ENST00000316407 UNQ6190/PRO20217Q6UXQ8 127 aa6.35□□□□□ -1.39
USF3-201ENST00000316407 USP9YO00507 2555 aaPredicted RBP6.35□□□□□ -1.39
USF3-201ENST00000316407 PIEZO1Q92508 2521 aa6.35□□□□□ -1.39
USF3-201ENST00000316407 ADORA2A-AS1P86434 159 aa6.35□□□□□ -1.39
USF3-201ENST00000316407 PRLHP81277 87 aa6.34□□□□□ -1.39
USF3-201ENST00000316407 C18orf65Q6ZTR6 163 aa6.34□□□□□ -1.39
USF3-201ENST00000316407 MDFIQ99750 246 aa6.34□□□□□ -1.39
USF3-201ENST00000316407 M0R2N4 97 aa6.34□□□□□ -1.39
USF3-201ENST00000316407 DEFB114Q30KQ6 69 aa6.34□□□□□ -1.39
USF3-201ENST00000316407 SMIM1B2RUZ4 78 aa6.34□□□□□ -1.4
USF3-201ENST00000316407 HCG22E2RYF7 251 aa6.33□□□□□ -1.4
USF3-201ENST00000316407 RPL28P46779 137 aaKnown RBP6.33□□□□□ -1.4
USF3-201ENST00000316407 SMIM29Q86T20 159 aa6.33□□□□□ -1.4
USF3-201ENST00000316407 FLG2Q5D862 2391 aaPredicted RBP6.33□□□□□ -1.4
USF3-201ENST00000316407 C6orf223Q8N319 242 aa6.33□□□□□ -1.4
USF3-201ENST00000316407 C1orf64Q8NEQ6 169 aa6.33□□□□□ -1.4
USF3-201ENST00000316407 POLR2KP53803 58 aaKnown RBP6.33□□□□□ -1.4
USF3-201ENST00000316407 C7orf33Q8WU49 177 aa6.32□□□□□ -1.4
USF3-201ENST00000316407 PLA2G1BP04054 148 aaKnown RBP6.32□□□□□ -1.4
USF3-201ENST00000316407 REG3GQ6UW15 175 aa6.32□□□□□ -1.4
USF3-201ENST00000316407 CNFNQ9BYD5 112 aa6.32□□□□□ -1.4
USF3-201ENST00000316407 ZNF706Q9Y5V0 76 aaPredicted RBP6.32□□□□□ -1.4
USF3-201ENST00000316407 LINC00242Q5T6M2 205 aa6.31□□□□□ -1.4
USF3-201ENST00000316407 SPINT4Q6UDR6 99 aa6.31□□□□□ -1.4
USF3-201ENST00000316407 OXLD1Q5BKU9 147 aa6.31□□□□□ -1.4
USF3-201ENST00000316407 A0A087WSZ3 146 aa6.31□□□□□ -1.4
USF3-201ENST00000316407 EDN2P20800 178 aa6.31□□□□□ -1.4
USF3-201ENST00000316407 Q8IZM0 81 aa6.31□□□□□ -1.4
USF3-201ENST00000316407 LINC00337Q8N6G1 96 aa6.31□□□□□ -1.4
USF3-201ENST00000316407 CHD8Q9HCK8 2581 aa6.31□□□□□ -1.4
USF3-201ENST00000316407 LIMD2Q9BT23 127 aa6.3□□□□□ -1.4
USF3-201ENST00000316407 LINC00574Q9H8X3 128 aa6.3□□□□□ -1.4
USF3-201ENST00000316407 CDC42SE2Q9NRR3 84 aa6.3□□□□□ -1.4
USF3-201ENST00000316407 TMEM89A2RUT3 159 aa6.3□□□□□ -1.4
USF3-201ENST00000316407 A0A096LNJ9 63 aa6.3□□□□□ -1.4
USF3-201ENST00000316407 KLLNB2CW77 178 aa6.3□□□□□ -1.4
USF3-201ENST00000316407 MUC22E2RYF6 1773 aaPredicted RBP6.3□□□□□ -1.4
USF3-201ENST00000316407 KPRPQ5T749 579 aaPredicted RBP6.3□□□□□ -1.4
USF3-201ENST00000316407 IGKV2D-30A0A075B6S6 120 aa6.29□□□□□ -1.4
USF3-201ENST00000316407 IGKV2-30P06310 120 aa6.29□□□□□ -1.4
USF3-201ENST00000316407 FSHBP01225 129 aa6.29□□□□□ -1.4
USF3-201ENST00000316407 CXCL6P80162 114 aa6.29□□□□□ -1.4
USF3-201ENST00000316407 Q9BRP9 147 aa6.29□□□□□ -1.4
USF3-201ENST00000316407 C7orf65Q6ZTY9 151 aa6.29□□□□□ -1.4
USF3-201ENST00000316407 ATP11AUNQ6ZP68 121 aa6.29□□□□□ -1.4
USF3-201ENST00000316407 FSTL3O95633 263 aa6.28□□□□□ -1.4
USF3-201ENST00000316407 DAZAP2Q15038 168 aaPredicted RBP6.28□□□□□ -1.4
USF3-201ENST00000316407 UTRNP46939 3433 aa6.28□□□□□ -1.4
USF3-201ENST00000316407 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
USF3-201ENST00000316407 CHCHD7Q9BUK0 85 aa6.28□□□□□ -1.4
USF3-201ENST00000316407 IL17DQ8TAD2 202 aa6.27□□□□□ -1.41
USF3-201ENST00000316407 PLA2G2CQ5R387 149 aa6.27□□□□□ -1.41
USF3-201ENST00000316407 A0A1B0GU69 56 aa6.27□□□□□ -1.41
USF3-201ENST00000316407 MUC7Q8TAX7 377 aa6.27□□□□□ -1.41
USF3-201ENST00000316407 CEP295Q9C0D2 2601 aa6.26□□□□□ -1.41
USF3-201ENST00000316407 C8orf87E5RJ46 101 aa6.26□□□□□ -1.41
USF3-201ENST00000316407 A0A1W2PNU3 283 aaPredicted RBP6.26□□□□□ -1.41
USF3-201ENST00000316407 IGLV4-60A0A075B6I1 120 aa6.26□□□□□ -1.41
USF3-201ENST00000316407 FAM19A4Q96LR4 140 aa6.26□□□□□ -1.41
USF3-201ENST00000316407 C19orf84I3L1E1 186 aa6.26□□□□□ -1.41
USF3-201ENST00000316407 PIP4P1Q86T03 277 aa6.26□□□□□ -1.41
USF3-201ENST00000316407 SSBP3-AS1Q7Z2R9 100 aa6.25□□□□□ -1.41
USF3-201ENST00000316407 LELP1Q5T871 98 aa6.25□□□□□ -1.41
USF3-201ENST00000316407 J3QKU1 62 aa6.25□□□□□ -1.41
USF3-201ENST00000316407 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
USF3-201ENST00000316407 FHL2Q14192 279 aa6.24□□□□□ -1.41
USF3-201ENST00000316407 LINC01561Q8N1V8 128 aa6.24□□□□□ -1.41
USF3-201ENST00000316407 Q6ZSN1 163 aa6.24□□□□□ -1.41
USF3-201ENST00000316407 LMO4P61968 165 aa6.23□□□□□ -1.41
USF3-201ENST00000316407 FAM218AQ96MZ4 157 aa6.23□□□□□ -1.41
USF3-201ENST00000316407 TM2D3Q9BRN9 247 aa6.23□□□□□ -1.41
USF3-201ENST00000316407 TRAV10A0A0B4J240 114 aa6.23□□□□□ -1.41
USF3-201ENST00000316407 IGFL2Q6UWQ7 119 aa6.23□□□□□ -1.41
USF3-201ENST00000316407 AMELXQ99217 191 aa6.23□□□□□ -1.41
USF3-201ENST00000316407 FASNP49327 2511 aaKnown RBP6.22□□□□□ -1.41
USF3-201ENST00000316407 RPS28P62857 69 aaKnown RBP6.22□□□□□ -1.41
USF3-201ENST00000316407 LINC00474Q9P2X8 69 aa6.22□□□□□ -1.41
USF3-201ENST00000316407 PRO0461Q9UI25 63 aa6.22□□□□□ -1.41
USF3-201ENST00000316407 C6orf48Q9UBA6 75 aa6.22□□□□□ -1.41
USF3-201ENST00000316407 NHLRC4P0CG21 123 aaPredicted RBP6.22□□□□□ -1.41
USF3-201ENST00000316407 Q8N2B8 174 aa6.21□□□□□ -1.41
USF3-201ENST00000316407 Q6YL49 198 aa6.21□□□□□ -1.42
USF3-201ENST00000316407 PSMG3-AS1Q96PY0 264 aa6.21□□□□□ -1.42
USF3-201ENST00000316407 SPATA3Q8NHX4 192 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms