RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TSPEAR-AS2P59090 65 aa5.94□□□□□ -1.46
VPS41-202ENST00000310301 NCOA6Q14686 2063 aaPredicted RBP5.94□□□□□ -1.46
VPS41-202ENST00000310301 LOC100131303A0A0U1RQF7 123 aa5.93□□□□□ -1.46
VPS41-202ENST00000310301 CDIP1Q9H305 208 aa5.93□□□□□ -1.46
VPS41-202ENST00000310301 RPL28P46779 137 aaKnown RBP5.93□□□□□ -1.46
VPS41-202ENST00000310301 BRI3O95415 125 aa5.92□□□□□ -1.46
VPS41-202ENST00000310301 Q8N2B8 174 aa5.92□□□□□ -1.46
VPS41-202ENST00000310301 CNFNQ9BYD5 112 aa5.92□□□□□ -1.46
VPS41-202ENST00000310301 CPAMD8Q8IZJ3 1885 aa5.92□□□□□ -1.46
VPS41-202ENST00000310301 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.92□□□□□ -1.46
VPS41-202ENST00000310301 C10orf99Q6UWK7 81 aa5.92□□□□□ -1.46
VPS41-202ENST00000310301 PRM2P04554 102 aa5.91□□□□□ -1.46
VPS41-202ENST00000310301 ADAMTSL4-AS1Q5T5F5 129 aa5.91□□□□□ -1.46
VPS41-202ENST00000310301 IGLV1-51P01701 117 aa5.91□□□□□ -1.46
VPS41-202ENST00000310301 Q8IZM0 81 aa5.91□□□□□ -1.46
VPS41-202ENST00000310301 CDC42SE2Q9NRR3 84 aa5.91□□□□□ -1.46
VPS41-202ENST00000310301 TANC2Q9HCD6 1990 aa5.91□□□□□ -1.46
VPS41-202ENST00000310301 C4orf26Q17RF5 130 aa5.91□□□□□ -1.46
VPS41-202ENST00000310301 IGLV9-49A0A0B4J1Y8 123 aa5.91□□□□□ -1.46
VPS41-202ENST00000310301 KLLNB2CW77 178 aa5.91□□□□□ -1.46
VPS41-202ENST00000310301 ESRGQ1W209 222 aa5.91□□□□□ -1.46
VPS41-202ENST00000310301 TMEM254Q8TBM7 123 aa5.9□□□□□ -1.46
VPS41-202ENST00000310301 TNCP24821 2201 aa5.9□□□□□ -1.46
VPS41-202ENST00000310301 LINC00242Q5T6M2 205 aa5.9□□□□□ -1.46
VPS41-202ENST00000310301 HELZ2Q9BYK8 2649 aaKnown RBP5.9□□□□□ -1.47
VPS41-202ENST00000310301 PCOTHQ58A44 107 aa5.9□□□□□ -1.47
VPS41-202ENST00000310301 LINC01547P58512 204 aaPredicted RBP5.9□□□□□ -1.47
VPS41-202ENST00000310301 COX6A2Q02221 97 aa5.9□□□□□ -1.47
VPS41-202ENST00000310301 PCNX3Q9H6A9 2034 aa5.89□□□□□ -1.47
VPS41-202ENST00000310301 PRR3P79522 188 aaKnown RBP5.89□□□□□ -1.47
VPS41-202ENST00000310301 LINC00846Q9NV44 126 aa5.89□□□□□ -1.47
VPS41-202ENST00000310301 SMIM1B2RUZ4 78 aa5.89□□□□□ -1.47
VPS41-202ENST00000310301 CRYGAP11844 174 aa5.89□□□□□ -1.47
VPS41-202ENST00000310301 C1orf137Q5JT78 98 aa5.89□□□□□ -1.47
VPS41-202ENST00000310301 WWC2-AS2Q96NR7 200 aa5.89□□□□□ -1.47
VPS41-202ENST00000310301 Q6ZVQ6 151 aa5.89□□□□□ -1.47
VPS41-202ENST00000310301 ZNF706Q9Y5V0 76 aaPredicted RBP5.88□□□□□ -1.47
VPS41-202ENST00000310301 ANKRD17O75179 2603 aaKnown RBP5.88□□□□□ -1.47
VPS41-202ENST00000310301 CYSRT1A8MQ03 144 aa5.88□□□□□ -1.47
VPS41-202ENST00000310301 LINC00575Q6W349 94 aa5.88□□□□□ -1.47
VPS41-202ENST00000310301 A0A096LNJ9 63 aa5.88□□□□□ -1.47
VPS41-202ENST00000310301 TRBV10-3A0A0K0K1G6 114 aa5.87□□□□□ -1.47
VPS41-202ENST00000310301 H0Y9P7 68 aa5.87□□□□□ -1.47
VPS41-202ENST00000310301 C9orf116Q5BN46 136 aaPredicted RBP5.87□□□□□ -1.47
VPS41-202ENST00000310301 C10orf25Q5T742 122 aa5.87□□□□□ -1.47
VPS41-202ENST00000310301 SERTAD4-AS1Q5TG53 156 aa5.87□□□□□ -1.47
VPS41-202ENST00000310301 FSHBP01225 129 aa5.87□□□□□ -1.47
VPS41-202ENST00000310301 MUC7Q8TAX7 377 aa5.87□□□□□ -1.47
VPS41-202ENST00000310301 PLXNB1O43157 2135 aa5.87□□□□□ -1.47
VPS41-202ENST00000310301 FN1P02751 2386 aaKnown RBP5.87□□□□□ -1.47
VPS41-202ENST00000310301 PLAC8L1A1L4L8 177 aa5.86□□□□□ -1.47
VPS41-202ENST00000310301 C18orf65Q6ZTR6 163 aa5.86□□□□□ -1.47
VPS41-202ENST00000310301 CEP350Q5VT06 3117 aa5.86□□□□□ -1.47
VPS41-202ENST00000310301 LELP1Q5T871 98 aa5.86□□□□□ -1.47
VPS41-202ENST00000310301 UNQ6190/PRO20217Q6UXQ8 127 aa5.86□□□□□ -1.47
VPS41-202ENST00000310301 CHCHD7Q9BUK0 85 aa5.86□□□□□ -1.47
VPS41-202ENST00000310301 WDR87Q6ZQQ6 2873 aa5.86□□□□□ -1.47
VPS41-202ENST00000310301 HCFC1P51610 2035 aa5.86□□□□□ -1.47
VPS41-202ENST00000310301 IGHV6-1A0A0B4J1U7 121 aa5.84□□□□□ -1.47
VPS41-202ENST00000310301 Q9UF83 564 aa5.84□□□□□ -1.47
VPS41-202ENST00000310301 ARHGAP32A7KAX9 2087 aa5.84□□□□□ -1.47
VPS41-202ENST00000310301 RETNLBQ9BQ08 111 aa5.84□□□□□ -1.48
VPS41-202ENST00000310301 LIMD2Q9BT23 127 aa5.84□□□□□ -1.48
VPS41-202ENST00000310301 RPS28P62857 69 aaKnown RBP5.83□□□□□ -1.48
VPS41-202ENST00000310301 DEFB116Q30KQ4 102 aa5.83□□□□□ -1.48
VPS41-202ENST00000310301 AMELXQ99217 191 aa5.83□□□□□ -1.48
VPS41-202ENST00000310301 IGLV2-18A0A075B6J9 118 aa5.83□□□□□ -1.48
VPS41-202ENST00000310301 KPRPQ5T749 579 aaPredicted RBP5.83□□□□□ -1.48
VPS41-202ENST00000310301 C7orf33Q8WU49 177 aa5.83□□□□□ -1.48
VPS41-202ENST00000310301 ACANP16112 2415 aa5.83□□□□□ -1.48
VPS41-202ENST00000310301 hDV103S1A0JD37 113 aa5.83□□□□□ -1.48
VPS41-202ENST00000310301 HCG22E2RYF7 251 aa5.83□□□□□ -1.48
VPS41-202ENST00000310301 SPINK1P00995 79 aa5.82□□□□□ -1.48
VPS41-202ENST00000310301 CXCL6P80162 114 aa5.82□□□□□ -1.48
VPS41-202ENST00000310301 RAI1Q7Z5J4 1906 aaPredicted RBP5.82□□□□□ -1.48
VPS41-202ENST00000310301 SMCPP49901 116 aaPredicted RBP5.82□□□□□ -1.48
VPS41-202ENST00000310301 MRGPRG-AS1Q2M3A8 158 aa5.82□□□□□ -1.48
VPS41-202ENST00000310301 IGLV4-60A0A075B6I1 120 aa5.81□□□□□ -1.48
VPS41-202ENST00000310301 GOLGB1Q14789 3259 aaKnown RBP5.81□□□□□ -1.48
VPS41-202ENST00000310301 REG3GQ6UW15 175 aa5.81□□□□□ -1.48
VPS41-202ENST00000310301 EGFEM1PQ0D2K5 195 aa5.81□□□□□ -1.48
VPS41-202ENST00000310301 FHL3Q13643 280 aa5.81□□□□□ -1.48
VPS41-202ENST00000310301 X6R8D5 127 aa5.8□□□□□ -1.48
VPS41-202ENST00000310301 A8MTW9 85 aa5.8□□□□□ -1.48
VPS41-202ENST00000310301 A0A096LNT2 108 aa5.8□□□□□ -1.48
VPS41-202ENST00000310301 VPREB1P12018 145 aa5.8□□□□□ -1.48
VPS41-202ENST00000310301 EDN2P20800 178 aa5.8□□□□□ -1.48
VPS41-202ENST00000310301 SMIM29Q86T20 159 aa5.8□□□□□ -1.48
VPS41-202ENST00000310301 A0A087WSZ3 146 aa5.8□□□□□ -1.48
VPS41-202ENST00000310301 C1orf64Q8NEQ6 169 aa5.8□□□□□ -1.48
VPS41-202ENST00000310301 EXPH5Q8NEV8 1989 aa5.79□□□□□ -1.48
VPS41-202ENST00000310301 SPAG11AQ6PDA7 123 aa5.79□□□□□ -1.48
VPS41-202ENST00000310301 USP24Q9UPU5 2620 aa5.79□□□□□ -1.48
VPS41-202ENST00000310301 LINC00337Q8N6G1 96 aa5.79□□□□□ -1.48
VPS41-202ENST00000310301 Q9BRP9 147 aa5.79□□□□□ -1.48
VPS41-202ENST00000310301 ODF3L2Q3SX64 289 aa5.78□□□□□ -1.48
VPS41-202ENST00000310301 BAHCC1Q9P281 2608 aa5.78□□□□□ -1.48
VPS41-202ENST00000310301 SORL1Q92673 2214 aa5.78□□□□□ -1.48
VPS41-202ENST00000310301 M0R2N4 97 aa5.78□□□□□ -1.48
VPS41-202ENST00000310301 C6orf223Q8N319 242 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms