RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 TRBV30A0A0K0K1B3 111 aa7.03□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 ZNF22P17026 224 aaPredicted RBP7.03□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 GAGE2BQ13066 116 aa7.03□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 KIAA0087Q14695 138 aa7.03□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 TMEM170BQ5T4T1 132 aa7.03□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 UNQ6190/PRO20217Q6UXQ8 127 aa7.03□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 COX7B2Q8TF08 81 aa7.03□□□□□ -1.28
CSPG4P2Y-201ENST00000306853 F8VRH5 84 aa7.02□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 PANO1I0J062 215 aa7.02□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 NUPR1O60356 82 aa7.02□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 FABP4P15090 132 aa7.02□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 CIRBPQ14011 172 aaKnown RBP7.02□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 Q5VSD8 79 aa7.02□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 C6orf48Q9UBA6 75 aa7.02□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 A0A087WYN8 130 aa7.01□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 C11orf86A6NJI1 115 aa7.01□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 PTTG1IPP53801 180 aa7.01□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 C10orf25Q5T742 122 aa7.01□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 LINC00528Q8N1L1 170 aa7.01□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 STPG4Q8N801 248 aa7.01□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 MAP1LC3CQ9BXW4 147 aa7□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 KIAA1109Q2LD37 5005 aa6.99□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 PLA2G1BP04054 148 aaKnown RBP6.99□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 TLX1NBP0CAT3 122 aa6.99□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 ODF1Q14990 250 aa6.99□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 PLAC8Q9NZF1 115 aa6.99□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 PLNP26678 52 aa6.98□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 GAGE2EQ4V326 116 aa6.98□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 C7orf33Q8WU49 177 aa6.98□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 GAGE2DQ9UEU5 116 aa6.98□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 IGLV5-39A0A0G2JS06 123 aa6.97□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 C9orf116Q5BN46 136 aaPredicted RBP6.97□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 SFTA2Q6UW10 78 aa6.97□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 Q6ZRP5 223 aa6.97□□□□□ -1.29
CSPG4P2Y-201ENST00000306853 TMEM223A0PJW6 202 aa6.96□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 DPM2O94777 84 aa6.96□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 RPL37AP61513 92 aaKnown RBP6.96□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 HERVK_113P61574 105 aa6.96□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 COA6Q5JTJ3 125 aaKnown RBP6.96□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 HSPG2P98160 4391 aa6.96□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 RYR1P21817 5038 aa6.96□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 IGKCP01834 107 aa6.95□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 SYS1-DBNDD2H3BUS1 97 aa6.94□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 S100A6P06703 90 aa6.94□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 PMCHL2Q9BQD1 86 aa6.94□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 KRTAP4-5Q9BYR2 181 aa6.94□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 DNAH8Q96JB1 4490 aa6.93□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 FAM19A5Q7Z5A7 132 aaPredicted RBP6.93□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 A0A1W2PNN7 141 aa6.92□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 S100A2P29034 98 aa6.92□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 KRTDAPP60985 99 aa6.92□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 PET117Q6UWS5 81 aa6.92□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 ERG28Q9UKR5 140 aa6.92□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 HERC2O95714 4834 aa6.91□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 C20orf202A1L168 122 aa6.91□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 PFN2P35080 140 aa6.91□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 COX17Q14061 63 aa6.91□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 PLEKHB2Q96CS7 222 aa6.91□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 ZNF625Q96I27 306 aaPredicted RBP6.91□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 FAM168BA1KXE4 195 aa6.9□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 M0QXV9 152 aa6.9□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 LEPROTO15243 131 aa6.9□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 C3orf79P0CE67 100 aa6.9□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 HERV-K104P63124 156 aa6.9□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 MEIG1Q5JSS6 88 aa6.9□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 C9orf129Q5T035 196 aaKnown RBP6.9□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 XAGE1AQ9HD64 81 aa6.9□□□□□ -1.3
CSPG4P2Y-201ENST00000306853 MYMXA0A1B0GTQ4 84 aa6.89□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 LGALS3P17931 250 aaKnown RBP6.89□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 LINC01545Q5VT33 79 aa6.89□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 PHF5AQ7RTV0 110 aaKnown RBP6.89□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 LINC00587B1AMM8 73 aa6.88□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 J3QQQ9 107 aa6.88□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 LINC00158P58513 81 aa6.88□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 UBE2BP63146 152 aa6.88□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 NMUP48645 174 aa6.87□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 AKR1D1P51857 326 aa6.87□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 PRR3P79522 188 aaKnown RBP6.87□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 HIST3H2BBQ8N257 126 aa6.87□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 E9PLD3 99 aa6.86□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 TSPEAR-AS2P59090 65 aa6.86□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 LBHQ53QV2 105 aaPredicted RBP6.86□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 SERTAD4-AS1Q5TG53 156 aa6.86□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 A0A0U1RRA0 63 aa6.85□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 KRTAP10-4P60372 401 aaPredicted RBP6.85□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 SND1-IT1Q9HBX3 110 aa6.85□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 PLA2G2DQ9UNK4 145 aa6.85□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 SMIM13P0DJ93 91 aa6.84□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 RPL24P83731 157 aaKnown RBP6.84□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 MRPL55Q7Z7F7 128 aaKnown RBP6.84□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 HIST1H2BLQ99880 126 aa6.84□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 TP73-AS1Q9UF72 201 aa6.84□□□□□ -1.31
CSPG4P2Y-201ENST00000306853 C22orf24Q9Y442 160 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms