RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 hDV103S1A0JD37 113 aa9.84□□□□□ -0.83
TRIM56-201ENST00000306085 K7EQG2 157 aa9.84□□□□□ -0.83
TRIM56-201ENST00000306085 CHD8Q9HCK8 2581 aa9.83□□□□□ -0.84
TRIM56-201ENST00000306085 ADORA2A-AS1P86434 159 aa9.83□□□□□ -0.84
TRIM56-201ENST00000306085 PLA2G5P39877 138 aa9.83□□□□□ -0.84
TRIM56-201ENST00000306085 CXCL6P80162 114 aa9.83□□□□□ -0.84
TRIM56-201ENST00000306085 LINC01556Q5JQF7 62 aa9.83□□□□□ -0.84
TRIM56-201ENST00000306085 IGLV1-47P01700 117 aa9.82□□□□□ -0.84
TRIM56-201ENST00000306085 THSD7BQ9C0I4 1608 aa9.82□□□□□ -0.84
TRIM56-201ENST00000306085 ANKRD17O75179 2603 aaKnown RBP9.82□□□□□ -0.84
TRIM56-201ENST00000306085 C8orf87E5RJ46 101 aa9.82□□□□□ -0.84
TRIM56-201ENST00000306085 IGLV5-52A0A0A0MRZ9 124 aa9.82□□□□□ -0.84
TRIM56-201ENST00000306085 Q8IZM0 81 aa9.81□□□□□ -0.84
TRIM56-201ENST00000306085 PRM2P04554 102 aa9.81□□□□□ -0.84
TRIM56-201ENST00000306085 SSBP3-AS1Q7Z2R9 100 aa9.81□□□□□ -0.84
TRIM56-201ENST00000306085 IGLV2-11P01706 119 aa9.81□□□□□ -0.84
TRIM56-201ENST00000306085 ATP11AUNQ6ZP68 121 aa9.81□□□□□ -0.84
TRIM56-201ENST00000306085 INAFM1C9JVW0 142 aa9.8□□□□□ -0.84
TRIM56-201ENST00000306085 KRTAP27-1Q3LI81 207 aa9.8□□□□□ -0.84
TRIM56-201ENST00000306085 A0A087WSZ3 146 aa9.8□□□□□ -0.84
TRIM56-201ENST00000306085 OXLD1Q5BKU9 147 aa9.79□□□□□ -0.84
TRIM56-201ENST00000306085 CRIP1P50238 77 aa9.79□□□□□ -0.84
TRIM56-201ENST00000306085 C2orf48Q96LS8 159 aa9.79□□□□□ -0.84
TRIM56-201ENST00000306085 EPG5Q9HCE0 2579 aa9.79□□□□□ -0.84
TRIM56-201ENST00000306085 LINC00337Q8N6G1 96 aa9.79□□□□□ -0.84
TRIM56-201ENST00000306085 UNQ6190/PRO20217Q6UXQ8 127 aa9.78□□□□□ -0.84
TRIM56-201ENST00000306085 C6orf223Q8N319 242 aa9.77□□□□□ -0.84
TRIM56-201ENST00000306085 ZNF702PQ9H963 129 aa9.76□□□□□ -0.85
TRIM56-201ENST00000306085 ODF3BA8MYP8 253 aa9.76□□□□□ -0.85
TRIM56-201ENST00000306085 FSHBP01225 129 aa9.76□□□□□ -0.85
TRIM56-201ENST00000306085 Q6ZSV7 163 aa9.76□□□□□ -0.85
TRIM56-201ENST00000306085 Q6YL49 198 aa9.76□□□□□ -0.85
TRIM56-201ENST00000306085 ACYP2P14621 99 aa9.75□□□□□ -0.85
TRIM56-201ENST00000306085 C4orf26Q17RF5 130 aa9.75□□□□□ -0.85
TRIM56-201ENST00000306085 PLA2G2CQ5R387 149 aa9.75□□□□□ -0.85
TRIM56-201ENST00000306085 PIP4P1Q86T03 277 aa9.74□□□□□ -0.85
TRIM56-201ENST00000306085 ANKRD11Q6UB99 2663 aaPredicted RBP9.74□□□□□ -0.85
TRIM56-201ENST00000306085 C6orf48Q9UBA6 75 aa9.74□□□□□ -0.85
TRIM56-201ENST00000306085 Q6ZTC4 211 aa9.74□□□□□ -0.85
TRIM56-201ENST00000306085 C10orf99Q6UWK7 81 aa9.73□□□□□ -0.85
TRIM56-201ENST00000306085 MUC7Q8TAX7 377 aa9.73□□□□□ -0.85
TRIM56-201ENST00000306085 A8MTW9 85 aa9.71□□□□□ -0.85
TRIM56-201ENST00000306085 CDC42SE2Q9NRR3 84 aa9.71□□□□□ -0.85
TRIM56-201ENST00000306085 COX6A2Q02221 97 aa9.71□□□□□ -0.86
TRIM56-201ENST00000306085 SMIM29Q86T20 159 aa9.71□□□□□ -0.86
TRIM56-201ENST00000306085 MDFIQ99750 246 aa9.7□□□□□ -0.86
TRIM56-201ENST00000306085 EGFEM1PQ0D2K5 195 aa9.7□□□□□ -0.86
TRIM56-201ENST00000306085 PRR9Q5T870 116 aa9.7□□□□□ -0.86
TRIM56-201ENST00000306085 FSTL3O95633 263 aa9.7□□□□□ -0.86
TRIM56-201ENST00000306085 C11orf1Q9H5F2 150 aa9.69□□□□□ -0.86
TRIM56-201ENST00000306085 GAS8-AS1O95177 125 aa9.69□□□□□ -0.86
TRIM56-201ENST00000306085 COL27A1Q8IZC6 1860 aaPredicted RBP9.69□□□□□ -0.86
TRIM56-201ENST00000306085 C18orf65Q6ZTR6 163 aa9.68□□□□□ -0.86
TRIM56-201ENST00000306085 MRGPRG-AS1Q2M3A8 158 aa9.67□□□□□ -0.86
TRIM56-201ENST00000306085 CR1P17927 2039 aa9.67□□□□□ -0.86
TRIM56-201ENST00000306085 PCSK5Q92824 1860 aa9.67□□□□□ -0.86
TRIM56-201ENST00000306085 P0C879 139 aa9.67□□□□□ -0.86
TRIM56-201ENST00000306085 SPACA4Q8TDM5 124 aa9.66□□□□□ -0.86
TRIM56-201ENST00000306085 ADAMTSL4-AS1Q5T5F5 129 aa9.65□□□□□ -0.86
TRIM56-201ENST00000306085 LINC00242Q5T6M2 205 aa9.64□□□□□ -0.87
TRIM56-201ENST00000306085 SMIM1B2RUZ4 78 aa9.64□□□□□ -0.87
TRIM56-201ENST00000306085 LMO4P61968 165 aa9.64□□□□□ -0.87
TRIM56-201ENST00000306085 IGFL2Q6UWQ7 119 aa9.64□□□□□ -0.87
TRIM56-201ENST00000306085 LINC00846Q9NV44 126 aa9.64□□□□□ -0.87
TRIM56-201ENST00000306085 KLLNB2CW77 178 aa9.63□□□□□ -0.87
TRIM56-201ENST00000306085 RPS28P62857 69 aaKnown RBP9.62□□□□□ -0.87
TRIM56-201ENST00000306085 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
TRIM56-201ENST00000306085 PRRC2CQ9Y520 2896 aaKnown RBP9.61□□□□□ -0.87
TRIM56-201ENST00000306085 TP53AIP1Q9HCN2 124 aa9.61□□□□□ -0.87
TRIM56-201ENST00000306085 LY6G6DO95868 133 aa9.61□□□□□ -0.87
TRIM56-201ENST00000306085 TSPEAR-AS2P59090 65 aa9.61□□□□□ -0.87
TRIM56-201ENST00000306085 IGIPA6NJ69 53 aa9.61□□□□□ -0.87
TRIM56-201ENST00000306085 C11orf21Q9P2W6 132 aa9.61□□□□□ -0.87
TRIM56-201ENST00000306085 CRIPTQ9P021 101 aa9.6□□□□□ -0.87
TRIM56-201ENST00000306085 C1orf229Q6ZS94 237 aaPredicted RBP9.59□□□□□ -0.87
TRIM56-201ENST00000306085 MOBPQ13875 183 aa9.59□□□□□ -0.87
TRIM56-201ENST00000306085 CDIP1Q9H305 208 aa9.59□□□□□ -0.87
TRIM56-201ENST00000306085 APLNQ9ULZ1 77 aa9.58□□□□□ -0.88
TRIM56-201ENST00000306085 IGLV4-60A0A075B6I1 120 aa9.58□□□□□ -0.88
TRIM56-201ENST00000306085 ZNF295-AS1Q8N0V1 137 aa9.57□□□□□ -0.88
TRIM56-201ENST00000306085 BRI3O95415 125 aa9.57□□□□□ -0.88
TRIM56-201ENST00000306085 BRWD1-AS2P59051 145 aa9.57□□□□□ -0.88
TRIM56-201ENST00000306085 LINC00574Q9H8X3 128 aa9.57□□□□□ -0.88
TRIM56-201ENST00000306085 EIF4EBP1Q13541 118 aaPredicted RBP9.56□□□□□ -0.88
TRIM56-201ENST00000306085 CEP295Q9C0D2 2601 aa9.56□□□□□ -0.88
TRIM56-201ENST00000306085 C19orf84I3L1E1 186 aa9.55□□□□□ -0.88
TRIM56-201ENST00000306085 C1orf134Q5TEV5 83 aa9.55□□□□□ -0.88
TRIM56-201ENST00000306085 ZNF580Q9UK33 172 aa9.55□□□□□ -0.88
TRIM56-201ENST00000306085 CHCHD7Q9BUK0 85 aa9.55□□□□□ -0.88
TRIM56-201ENST00000306085 PSMG3-AS1Q96PY0 264 aa9.54□□□□□ -0.88
TRIM56-201ENST00000306085 KIAA0087Q14695 138 aa9.54□□□□□ -0.88
TRIM56-201ENST00000306085 LINC01600Q96MT4 127 aa9.53□□□□□ -0.88
TRIM56-201ENST00000306085 LINC01006Q8NI28 216 aa9.53□□□□□ -0.88
TRIM56-201ENST00000306085 TRAV22A0A0B4J277 110 aa9.53□□□□□ -0.88
TRIM56-201ENST00000306085 ATRQ13535 2644 aa9.52□□□□□ -0.89
TRIM56-201ENST00000306085 AKAP13Q12802 2813 aa9.52□□□□□ -0.89
TRIM56-201ENST00000306085 FBXL19-AS1Q494R0 122 aa9.51□□□□□ -0.89
TRIM56-201ENST00000306085 CNFNQ9BYD5 112 aa9.51□□□□□ -0.89
TRIM56-201ENST00000306085 HECTD1Q9ULT8 2610 aa9.51□□□□□ -0.89
TRIM56-201ENST00000306085 LINC00313P59037 77 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms