RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 MRPS36P82909 103 aaKnown RBP4.03□□□□□ -1.77
ZNF440-201ENST00000304060 FAM104BQ5XKR9 115 aa4.03□□□□□ -1.77
ZNF440-201ENST00000304060 LINC00643Q86TS7 51 aa4.03□□□□□ -1.77
ZNF440-201ENST00000304060 Q8N8P6 123 aa4.03□□□□□ -1.77
ZNF440-201ENST00000304060 TTTY13Q9BZ97 58 aa4.03□□□□□ -1.77
ZNF440-201ENST00000304060 C4orf26Q17RF5 130 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 LOC107984156A0A0G2JMH3 177 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 SUMO2P61956 95 aaKnown RBP4.02□□□□□ -1.77
ZNF440-201ENST00000304060 ZFP2Q6ZN57 461 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 C9orf47Q6ZRZ4 202 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 ARL17AQ8IVW1 177 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 TMEM75Q8N9X5 138 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 FAM19A4Q96LR4 140 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 V9GYY9 64 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 TRBV10-1A0A0K0K1A3 114 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 IGHV3-30P01768 117 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 IGHV3-33P01772 117 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 IGHV3-30-3P0DP02 117 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 IGHV3-30-5P0DP03 117 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 KRTAP10-2P60368 255 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 C20orf173Q96LM9 149 aa4.02□□□□□ -1.77
ZNF440-201ENST00000304060 DNAH9Q9NYC9 4486 aa4.01□□□□□ -1.77
ZNF440-201ENST00000304060 A0A1B0GUT8 65 aa4.01□□□□□ -1.77
ZNF440-201ENST00000304060 J3QQQ9 107 aa4.01□□□□□ -1.77
ZNF440-201ENST00000304060 IFI27P40305 119 aaPredicted RBP4.01□□□□□ -1.77
ZNF440-201ENST00000304060 ZC2HC1BQ5TFG8 222 aa4.01□□□□□ -1.77
ZNF440-201ENST00000304060 NEXN-AS1Q8NBZ9 246 aa4.01□□□□□ -1.77
ZNF440-201ENST00000304060 K7EQD1 137 aa4.01□□□□□ -1.77
ZNF440-201ENST00000304060 NDUFC2O95298 119 aa4.01□□□□□ -1.77
ZNF440-201ENST00000304060 LAGE3Q14657 143 aa4.01□□□□□ -1.77
ZNF440-201ENST00000304060 LINC01620Q4KN68 170 aa4.01□□□□□ -1.77
ZNF440-201ENST00000304060 REG3GQ6UW15 175 aa4.01□□□□□ -1.77
ZNF440-201ENST00000304060 AMELXQ99217 191 aa4.01□□□□□ -1.77
ZNF440-201ENST00000304060 RYR2Q92736 4967 aa4□□□□□ -1.77
ZNF440-201ENST00000304060 CFC1BP0CG36 223 aa4□□□□□ -1.77
ZNF440-201ENST00000304060 CFC1P0CG37 223 aa4□□□□□ -1.77
ZNF440-201ENST00000304060 NXT2Q9NPJ8 142 aaKnown RBP4□□□□□ -1.77
ZNF440-201ENST00000304060 EIF4EBP3O60516 100 aaPredicted RBP4□□□□□ -1.77
ZNF440-201ENST00000304060 ORMDL3Q8N138 153 aa4□□□□□ -1.77
ZNF440-201ENST00000304060 KMT2CQ8NEZ4 4911 aaKnown RBP4□□□□□ -1.77
ZNF440-201ENST00000304060 TRACP01848 142 aa4□□□□□ -1.77
ZNF440-201ENST00000304060 ATXN8Q156A1 80 aa4□□□□□ -1.77
ZNF440-201ENST00000304060 GAGE2AQ6NT46 116 aa4□□□□□ -1.77
ZNF440-201ENST00000304060 Q86TA4 180 aa4□□□□□ -1.77
ZNF440-201ENST00000304060 SERP1Q9Y6X1 66 aa4□□□□□ -1.77
ZNF440-201ENST00000304060 SH2D1AO60880 128 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 PSMB2P49721 201 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 HERVK_113P61574 105 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 Q6ZRU5 148 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 DAZ4Q86SG3 579 aaKnown RBP3.99□□□□□ -1.77
ZNF440-201ENST00000304060 RNF185Q96GF1 192 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 HIST1H4GQ99525 98 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 KRTAP4-5Q9BYR2 181 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 DAZ3Q9NR90 486 aaKnown RBP3.99□□□□□ -1.77
ZNF440-201ENST00000304060 FLG2Q5D862 2391 aaPredicted RBP3.99□□□□□ -1.77
ZNF440-201ENST00000304060 SMKR1H3BMG3 65 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 H7C2G1 150 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 DNAH10OSP0CZ25 163 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 LYPD5Q6UWN5 251 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 Q6ZTI0 123 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 SLC25A29Q8N8R3 303 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 MRPS12O15235 138 aaKnown RBP3.99□□□□□ -1.77
ZNF440-201ENST00000304060 LINC01556Q5JQF7 62 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 DAND5Q8N907 189 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 TRAV8-2A0A0B4J237 113 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 KRTAP10-1P60331 282 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 LELP1Q5T871 98 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 CHCHD7Q9BUK0 85 aa3.99□□□□□ -1.77
ZNF440-201ENST00000304060 Q8N814 137 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 MRPL36Q9P0J6 103 aaKnown RBP3.98□□□□□ -1.77
ZNF440-201ENST00000304060 TOMM7Q9P0U1 55 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 KLK12Q9UKR0 248 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.98□□□□□ -1.77
ZNF440-201ENST00000304060 FAM236AA0A1B0GUQ0 79 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 FAM236BA0A1B0GV22 79 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 TRBV6-4A0A1B0GX49 114 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 A8MTW9 85 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 IBA57-AS1B1ANH7 110 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 SERP2Q8N6R1 65 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 C14orf178Q8N769 122 aaPredicted RBP3.98□□□□□ -1.77
ZNF440-201ENST00000304060 F8VRH5 84 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 MRPL51Q4U2R6 128 aaKnown RBP3.98□□□□□ -1.77
ZNF440-201ENST00000304060 PRR15Q8IV56 129 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 SMCR5Q8TEV8 140 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 VSIG2Q96IQ7 327 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 CYSTM1Q9H1C7 97 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 PRO1854Q9UHT4 67 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 RYR3Q15413 4870 aa3.98□□□□□ -1.77
ZNF440-201ENST00000304060 HRCT1Q6UXD1 115 aa3.97□□□□□ -1.77
ZNF440-201ENST00000304060 SCGB1D4Q6XE38 83 aa3.97□□□□□ -1.77
ZNF440-201ENST00000304060 OBSCN-AS1Q96MR7 158 aa3.97□□□□□ -1.77
ZNF440-201ENST00000304060 D6R8Y8 96 aa3.97□□□□□ -1.77
ZNF440-201ENST00000304060 UBE2BP63146 152 aa3.97□□□□□ -1.77
ZNF440-201ENST00000304060 RPL18AQ02543 176 aaKnown RBP3.97□□□□□ -1.77
ZNF440-201ENST00000304060 TMEM223A0PJW6 202 aa3.97□□□□□ -1.77
ZNF440-201ENST00000304060 H7C423 109 aa3.97□□□□□ -1.77
ZNF440-201ENST00000304060 PFN2P35080 140 aa3.97□□□□□ -1.77
ZNF440-201ENST00000304060 C2orf82Q6UX34 121 aa3.96□□□□□ -1.77
ZNF440-201ENST00000304060 PATE2Q6UY27 113 aa3.96□□□□□ -1.77
ZNF440-201ENST00000304060 IGKV1D-37A0A075B6S9 117 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms