RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 LINC00959A0A1B0GUT2 108 aa9.06□□□□□ -0.96
TVP23A-201ENST00000299866 HAMPP81172 84 aa9.06□□□□□ -0.96
TVP23A-201ENST00000299866 ITPR1Q14643 2758 aa9.05□□□□□ -0.96
TVP23A-201ENST00000299866 SETD2Q9BYW2 2564 aaPredicted RBP9.05□□□□□ -0.96
TVP23A-201ENST00000299866 NDUFC2-KCTD14E9PQ53 114 aa9.05□□□□□ -0.96
TVP23A-201ENST00000299866 RPL35AP18077 110 aaKnown RBP9.05□□□□□ -0.96
TVP23A-201ENST00000299866 SNURFQ9Y675 71 aa9.05□□□□□ -0.96
TVP23A-201ENST00000299866 PTPN13Q12923 2485 aa9.05□□□□□ -0.96
TVP23A-201ENST00000299866 SPTBN4Q9H254 2564 aa9.04□□□□□ -0.96
TVP23A-201ENST00000299866 Q6YL49 198 aa9.04□□□□□ -0.96
TVP23A-201ENST00000299866 LINC00167Q96N53 147 aa9.04□□□□□ -0.96
TVP23A-201ENST00000299866 WFDC10AQ9H1F0 79 aa9.04□□□□□ -0.96
TVP23A-201ENST00000299866 M0R2N4 97 aa9.03□□□□□ -0.96
TVP23A-201ENST00000299866 C6orf99Q4VX62 202 aa9.03□□□□□ -0.96
TVP23A-201ENST00000299866 C4orf3Q8WVX3 66 aa9.03□□□□□ -0.96
TVP23A-201ENST00000299866 LAMTOR3Q9UHA4 124 aa9.03□□□□□ -0.96
TVP23A-201ENST00000299866 FN1P02751 2386 aaKnown RBP9.02□□□□□ -0.96
TVP23A-201ENST00000299866 LYPD5Q6UWN5 251 aa9.02□□□□□ -0.97
TVP23A-201ENST00000299866 TRAV10A0A0B4J240 114 aa9.02□□□□□ -0.97
TVP23A-201ENST00000299866 H7BZZ5 65 aa9.02□□□□□ -0.97
TVP23A-201ENST00000299866 C9orf116Q5BN46 136 aaPredicted RBP9.02□□□□□ -0.97
TVP23A-201ENST00000299866 FBN2P35556 2912 aa9.01□□□□□ -0.97
TVP23A-201ENST00000299866 RBM3P98179 157 aaKnown RBP9.01□□□□□ -0.97
TVP23A-201ENST00000299866 RMI2Q96E14 147 aa9.01□□□□□ -0.97
TVP23A-201ENST00000299866 PLAC8L1A1L4L8 177 aa9.01□□□□□ -0.97
TVP23A-201ENST00000299866 A0A096LPF7 62 aa9□□□□□ -0.97
TVP23A-201ENST00000299866 EPG5Q9HCE0 2579 aa9□□□□□ -0.97
TVP23A-201ENST00000299866 TRAV7A0A075B6U4 112 aa9□□□□□ -0.97
TVP23A-201ENST00000299866 CENPEQ02224 2701 aa9□□□□□ -0.97
TVP23A-201ENST00000299866 TRBV10-3A0A0K0K1G6 114 aa8.99□□□□□ -0.97
TVP23A-201ENST00000299866 DEFB130BP0DP73 79 aa8.99□□□□□ -0.97
TVP23A-201ENST00000299866 DEFB130AP0DP74 79 aa8.99□□□□□ -0.97
TVP23A-201ENST00000299866 SERP1Q9Y6X1 66 aa8.99□□□□□ -0.97
TVP23A-201ENST00000299866 LINC00336Q6ZUF6 198 aa8.99□□□□□ -0.97
TVP23A-201ENST00000299866 C16orf74Q96GX8 76 aa8.99□□□□□ -0.97
TVP23A-201ENST00000299866 SONP18583 2426 aaKnown RBP8.99□□□□□ -0.97
TVP23A-201ENST00000299866 GIG44P09565 113 aaPredicted RBP8.99□□□□□ -0.97
TVP23A-201ENST00000299866 LINC01547P58512 204 aaPredicted RBP8.99□□□□□ -0.97
TVP23A-201ENST00000299866 UTP20O75691 2785 aaKnown RBP8.99□□□□□ -0.97
TVP23A-201ENST00000299866 Q6ZQT0 140 aa8.98□□□□□ -0.97
TVP23A-201ENST00000299866 Q8IZM0 81 aa8.98□□□□□ -0.97
TVP23A-201ENST00000299866 ANKRD17O75179 2603 aaKnown RBP8.98□□□□□ -0.97
TVP23A-201ENST00000299866 IGLV10-54A0A075B6I4 117 aa8.98□□□□□ -0.97
TVP23A-201ENST00000299866 SCXQ7RTU7 201 aa8.98□□□□□ -0.97
TVP23A-201ENST00000299866 F8WEM9 126 aa8.97□□□□□ -0.97
TVP23A-201ENST00000299866 Q8NDZ9 215 aa8.97□□□□□ -0.97
TVP23A-201ENST00000299866 Q6ZVQ6 151 aa8.97□□□□□ -0.97
TVP23A-201ENST00000299866 NAV2Q8IVL1 2488 aa8.97□□□□□ -0.97
TVP23A-201ENST00000299866 FLNCQ14315 2725 aa8.97□□□□□ -0.97
TVP23A-201ENST00000299866 LINC00269Q8N2A0 174 aa8.96□□□□□ -0.97
TVP23A-201ENST00000299866 NIPBLQ6KC79 2804 aaeCLIP8.96□□□□□ -0.97
TVP23A-201ENST00000299866 J3QLI3 93 aa8.96□□□□□ -0.97
TVP23A-201ENST00000299866 LINC00575Q6W349 94 aa8.96□□□□□ -0.97
TVP23A-201ENST00000299866 ZNF843Q8N446 348 aa8.96□□□□□ -0.97
TVP23A-201ENST00000299866 SPATA3Q8NHX4 192 aa8.96□□□□□ -0.97
TVP23A-201ENST00000299866 ACACBO00763 2458 aa8.95□□□□□ -0.98
TVP23A-201ENST00000299866 GYPEP15421 78 aa8.95□□□□□ -0.98
TVP23A-201ENST00000299866 MRAPQ8TCY5 172 aa8.95□□□□□ -0.98
TVP23A-201ENST00000299866 WFDC11Q8NEX6 87 aa8.95□□□□□ -0.98
TVP23A-201ENST00000299866 FAM208BQ5VWN6 2430 aa8.94□□□□□ -0.98
TVP23A-201ENST00000299866 DSCR9P59020 149 aa8.94□□□□□ -0.98
TVP23A-201ENST00000299866 C1orf43Q9BWL3 253 aa8.94□□□□□ -0.98
TVP23A-201ENST00000299866 LRRK2Q5S007 2527 aa8.94□□□□□ -0.98
TVP23A-201ENST00000299866 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
TVP23A-201ENST00000299866 LINC00482Q8N8I6 264 aa8.94□□□□□ -0.98
TVP23A-201ENST00000299866 TEX15Q9BXT5 2789 aa8.94□□□□□ -0.98
TVP23A-201ENST00000299866 SETXQ7Z333 2677 aaKnown RBP8.94□□□□□ -0.98
TVP23A-201ENST00000299866 CCL24O00175 119 aa8.93□□□□□ -0.98
TVP23A-201ENST00000299866 ZFYVE26Q68DK2 2539 aa8.93□□□□□ -0.98
TVP23A-201ENST00000299866 DOPEY1Q5JWR5 2465 aa8.93□□□□□ -0.98
TVP23A-201ENST00000299866 Q6ZQY7 126 aa8.93□□□□□ -0.98
TVP23A-201ENST00000299866 Q8N3U1 123 aa8.93□□□□□ -0.98
TVP23A-201ENST00000299866 KLKP1Q107X0 134 aa8.92□□□□□ -0.98
TVP23A-201ENST00000299866 LINC00474Q9P2X8 69 aa8.92□□□□□ -0.98
TVP23A-201ENST00000299866 TM2D3Q9BRN9 247 aa8.92□□□□□ -0.98
TVP23A-201ENST00000299866 PRO0628Q9UI54 55 aa8.92□□□□□ -0.98
TVP23A-201ENST00000299866 KIAA0087Q14695 138 aa8.92□□□□□ -0.98
TVP23A-201ENST00000299866 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
TVP23A-201ENST00000299866 PRB1P04280 392 aa8.91□□□□□ -0.98
TVP23A-201ENST00000299866 FP248Q71RG6 208 aaPredicted RBP8.91□□□□□ -0.98
TVP23A-201ENST00000299866 PKIGQ9Y2B9 76 aa8.91□□□□□ -0.98
TVP23A-201ENST00000299866 AKAP9Q99996 3911 aa8.91□□□□□ -0.98
TVP23A-201ENST00000299866 C6orf223Q8N319 242 aa8.91□□□□□ -0.98
TVP23A-201ENST00000299866 LOC110117498A0A087WWA1 95 aa8.9□□□□□ -0.98
TVP23A-201ENST00000299866 FSHBP01225 129 aa8.9□□□□□ -0.98
TVP23A-201ENST00000299866 IGHV4-31P0DP07 118 aa8.9□□□□□ -0.98
TVP23A-201ENST00000299866 NBPF19A0A087WUL8 3843 aa8.9□□□□□ -0.98
TVP23A-201ENST00000299866 CR1P17927 2039 aa8.9□□□□□ -0.98
TVP23A-201ENST00000299866 SMIM26A0A096LP01 95 aa8.9□□□□□ -0.98
TVP23A-201ENST00000299866 NF1P21359 2839 aa8.9□□□□□ -0.98
TVP23A-201ENST00000299866 MYO18BQ8IUG5 2567 aa8.9□□□□□ -0.98
TVP23A-201ENST00000299866 CHCHD10Q8WYQ3 142 aaPredicted RBP8.9□□□□□ -0.99
TVP23A-201ENST00000299866 NBEAL2Q6ZNJ1 2754 aa8.89□□□□□ -0.99
TVP23A-201ENST00000299866 BCE1O60756 84 aa8.89□□□□□ -0.99
TVP23A-201ENST00000299866 ANGP03950 147 aaKnown RBP8.89□□□□□ -0.99
TVP23A-201ENST00000299866 COX17Q14061 63 aa8.89□□□□□ -0.99
TVP23A-201ENST00000299866 TRBV7-6A0A0J9YX20 115 aa8.88□□□□□ -0.99
TVP23A-201ENST00000299866 C10orf25Q5T742 122 aa8.88□□□□□ -0.99
TVP23A-201ENST00000299866 UNQ6190/PRO20217Q6UXQ8 127 aa8.88□□□□□ -0.99
TVP23A-201ENST00000299866 CSNK1G2-AS1Q8NCQ2 148 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms