RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 SMAGPQ0VAQ4 97 aa4.25□□□□□ -1.73
DEPDC4-201ENST00000299185 PET117Q6UWS5 81 aa4.25□□□□□ -1.73
DEPDC4-201ENST00000299185 RMI2Q96E14 147 aa4.25□□□□□ -1.73
DEPDC4-201ENST00000299185 TP73-AS1Q9UF72 201 aa4.25□□□□□ -1.73
DEPDC4-201ENST00000299185 IGHV3OR16-9A0A0B4J2B5 98 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 SMIM1B2RUZ4 78 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 F8VRH5 84 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 COX7A2LO14548 114 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 SCGB1D1O95968 90 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 TSPEAR-AS2P59090 65 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 SPAG11BQ08648 103 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 MAJINQ3KP22 176 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 PYY3Q5JQD4 70 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 CD164L2Q6UWJ8 174 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 ORAOV1Q8WV07 137 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 GEMIN7Q9H840 131 aaKnown RBP4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 TOMM7Q9P0U1 55 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 FRAS1Q86XX4 4008 aa4.24□□□□□ -1.73
DEPDC4-201ENST00000299185 IGLV5-45A0A087WSX0 123 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 TRAV12-1A0A0B4J245 112 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 TRAV8-4A0A0B4J246 113 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 TINCRA0A1B0GVN0 87 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 A0A1B0GVY2 172 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 hDV102S1A0JD36 115 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 SMIM6P0DI80 62 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 MALP21145 153 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 HAMPP81172 84 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 PAPPA-AS1Q5QFB9 102 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 TMEM170BQ5T4T1 132 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 C10orf25Q5T742 122 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 LINC01545Q5VT33 79 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 C2orf82Q6UX34 121 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 NFE4Q86UQ8 179 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 TM2D2Q9BX73 214 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
DEPDC4-201ENST00000299185 A0A087WZ39 114 aa4.22□□□□□ -1.73
DEPDC4-201ENST00000299185 C20orf202A1L168 122 aa4.22□□□□□ -1.73
DEPDC4-201ENST00000299185 DPM2O94777 84 aa4.22□□□□□ -1.73
DEPDC4-201ENST00000299185 FAM19A3Q7Z5A8 133 aa4.22□□□□□ -1.73
DEPDC4-201ENST00000299185 LINC00518Q8N0U6 118 aa4.22□□□□□ -1.73
DEPDC4-201ENST00000299185 Q8N814 137 aa4.22□□□□□ -1.73
DEPDC4-201ENST00000299185 TTTY13Q9BZ97 58 aa4.22□□□□□ -1.73
DEPDC4-201ENST00000299185 FAT2Q9NYQ8 4349 aa4.22□□□□□ -1.73
DEPDC4-201ENST00000299185 GVQW2A0A096LPI5 108 aaPredicted RBP4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 IGKV2D-26A0A0A0MRZ7 120 aa4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 IGHV1-58A0A0C4DH39 117 aa4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 TMEM223A0PJW6 202 aa4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 K7EP13 123 aa4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 IGKCP01834 107 aa4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 HERVK_113P63121 156 aa4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 KIAA0087Q14695 138 aa4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 Q6ZRU5 148 aa4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 STPG4Q8N801 248 aa4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 C12orf57Q99622 126 aa4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 DYNC1H1Q14204 4646 aaKnown RBP4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 KIAA1109Q2LD37 5005 aa4.21□□□□□ -1.74
DEPDC4-201ENST00000299185 CHTF8P0CG12 524 aa4.2□□□□□ -1.74
DEPDC4-201ENST00000299185 KRTAP10-1P60331 282 aa4.2□□□□□ -1.74
DEPDC4-201ENST00000299185 S100A12P80511 92 aa4.2□□□□□ -1.74
DEPDC4-201ENST00000299185 C9orf116Q5BN46 136 aaPredicted RBP4.2□□□□□ -1.74
DEPDC4-201ENST00000299185 UNQ6190/PRO20217Q6UXQ8 127 aa4.2□□□□□ -1.74
DEPDC4-201ENST00000299185 COX7B2Q8TF08 81 aa4.2□□□□□ -1.74
DEPDC4-201ENST00000299185 ABCA13Q86UQ4 5058 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 IGLV5-52A0A0A0MRZ9 124 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 IGLV5-39A0A0G2JS06 123 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 H3BRM9 83 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 PANO1I0J062 215 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 PLNP26678 52 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 CFAP161Q6P656 301 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 ZNF625Q96I27 306 aaPredicted RBP4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 CARD19Q96LW7 228 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 CAMK2N2Q96S95 79 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 FAM30AQ9NZY2 134 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 C6orf48Q9UBA6 75 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 COX11Q9Y6N1 276 aa4.19□□□□□ -1.74
DEPDC4-201ENST00000299185 A0A0U1RRA0 63 aa4.18□□□□□ -1.74
DEPDC4-201ENST00000299185 GCSHP23434 173 aa4.18□□□□□ -1.74
DEPDC4-201ENST00000299185 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
DEPDC4-201ENST00000299185 SEC11AP67812 179 aa4.18□□□□□ -1.74
DEPDC4-201ENST00000299185 SYCNQ0VAF6 134 aa4.18□□□□□ -1.74
DEPDC4-201ENST00000299185 LINC00336Q6ZUF6 198 aa4.18□□□□□ -1.74
DEPDC4-201ENST00000299185 PLEKHB2Q96CS7 222 aa4.18□□□□□ -1.74
DEPDC4-201ENST00000299185 VAMP8Q9BV40 100 aa4.18□□□□□ -1.74
DEPDC4-201ENST00000299185 DNAH5Q8TE73 4624 aa4.18□□□□□ -1.74
DEPDC4-201ENST00000299185 C16orf90A8MZG2 172 aa4.17□□□□□ -1.74
DEPDC4-201ENST00000299185 HSBP1L1C9JCN9 74 aa4.17□□□□□ -1.74
DEPDC4-201ENST00000299185 APOMO95445 188 aa4.17□□□□□ -1.74
DEPDC4-201ENST00000299185 NMUP48645 174 aa4.17□□□□□ -1.74
DEPDC4-201ENST00000299185 PCP2Q8IVA1 136 aa4.17□□□□□ -1.74
DEPDC4-201ENST00000299185 Q8IZM0 81 aa4.17□□□□□ -1.74
DEPDC4-201ENST00000299185 A0A096LNI7 61 aa4.16□□□□□ -1.74
DEPDC4-201ENST00000299185 IGKV2-24A0A0C4DH68 120 aa4.16□□□□□ -1.74
DEPDC4-201ENST00000299185 NDUFA1O15239 70 aa4.16□□□□□ -1.74
DEPDC4-201ENST00000299185 LEPROTO15243 131 aa4.16□□□□□ -1.74
DEPDC4-201ENST00000299185 PRSS2P07478 247 aa4.16□□□□□ -1.74
DEPDC4-201ENST00000299185 HERVK_113P61574 105 aa4.16□□□□□ -1.74
DEPDC4-201ENST00000299185 CNBPP62633 177 aaKnown RBP4.16□□□□□ -1.74
DEPDC4-201ENST00000299185 RPL18AQ02543 176 aaKnown RBP4.16□□□□□ -1.74
DEPDC4-201ENST00000299185 C14orf177Q52M58 125 aa4.16□□□□□ -1.74
DEPDC4-201ENST00000299185 SPATA45Q537H7 98 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms