RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 COX11Q9Y6N1 276 aa5.63□□□□□ -1.51
TFF1-201ENST00000291527 IGLV4-60A0A075B6I1 120 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 C11orf86A6NJI1 115 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 FGF6P10767 208 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 HINT1P49773 126 aaPredicted RBP5.62□□□□□ -1.51
TFF1-201ENST00000291527 BVES-AS1Q5T3Y7 98 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 STPG4Q8N801 248 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 C9orf163Q8N9P6 203 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 CHCHD5Q9BSY4 110 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 CHCHD7Q9BUK0 85 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 TIMM21Q9BVV7 248 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 VCX2Q9H322 139 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 CST9LQ9H4G1 147 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 PRR34Q9NV39 138 aa5.62□□□□□ -1.51
TFF1-201ENST00000291527 H7C423 109 aa5.61□□□□□ -1.51
TFF1-201ENST00000291527 TSHBP01222 138 aa5.61□□□□□ -1.51
TFF1-201ENST00000291527 SERTAD4-AS1Q5TG53 156 aa5.61□□□□□ -1.51
TFF1-201ENST00000291527 PLA2G2DQ9UNK4 145 aa5.61□□□□□ -1.51
TFF1-201ENST00000291527 TMEM238LA0A1B0GVL6 79 aa5.6□□□□□ -1.51
TFF1-201ENST00000291527 A6NJY4 79 aa5.6□□□□□ -1.51
TFF1-201ENST00000291527 MRPS36P82909 103 aaKnown RBP5.6□□□□□ -1.51
TFF1-201ENST00000291527 C2orf91Q6ZV80 131 aa5.6□□□□□ -1.51
TFF1-201ENST00000291527 LPAP08519 4548 aa5.59□□□□□ -1.51
TFF1-201ENST00000291527 MYMXA0A1B0GTQ4 84 aa5.59□□□□□ -1.51
TFF1-201ENST00000291527 H3BRM9 83 aa5.59□□□□□ -1.51
TFF1-201ENST00000291527 CRPP02741 224 aa5.59□□□□□ -1.51
TFF1-201ENST00000291527 DGAT2L7PQ6IED9 249 aa5.59□□□□□ -1.51
TFF1-201ENST00000291527 LINC00469Q8N7U9 141 aa5.59□□□□□ -1.51
TFF1-201ENST00000291527 PLEKHB2Q96CS7 222 aa5.59□□□□□ -1.51
TFF1-201ENST00000291527 CSDC2Q9Y534 153 aaKnown RBP5.59□□□□□ -1.51
TFF1-201ENST00000291527 TRBV25-1A0A075B6N4 114 aa5.58□□□□□ -1.52
TFF1-201ENST00000291527 ZNF25P17030 456 aaPredicted RBP5.58□□□□□ -1.52
TFF1-201ENST00000291527 CIRBPQ14011 172 aaKnown RBP5.58□□□□□ -1.52
TFF1-201ENST00000291527 MIAQ16674 131 aa5.58□□□□□ -1.52
TFF1-201ENST00000291527 C14orf177Q52M58 125 aa5.58□□□□□ -1.52
TFF1-201ENST00000291527 AMELXQ99217 191 aa5.58□□□□□ -1.52
TFF1-201ENST00000291527 IGLV4-3A0A075B6K6 122 aa5.57□□□□□ -1.52
TFF1-201ENST00000291527 A0A087WYN8 130 aa5.57□□□□□ -1.52
TFF1-201ENST00000291527 SMIM13P0DJ93 91 aa5.57□□□□□ -1.52
TFF1-201ENST00000291527 LGALS3P17931 250 aaKnown RBP5.57□□□□□ -1.52
TFF1-201ENST00000291527 PTTG1IPP53801 180 aa5.57□□□□□ -1.52
TFF1-201ENST00000291527 RPL39P62891 51 aaKnown RBP5.57□□□□□ -1.52
TFF1-201ENST00000291527 REG3AQ06141 175 aa5.57□□□□□ -1.52
TFF1-201ENST00000291527 TMEM170BQ5T4T1 132 aa5.57□□□□□ -1.52
TFF1-201ENST00000291527 SCGB1D4Q6XE38 83 aa5.57□□□□□ -1.52
TFF1-201ENST00000291527 GTF2H5Q6ZYL4 71 aa5.57□□□□□ -1.52
TFF1-201ENST00000291527 PCP2Q8IVA1 136 aa5.57□□□□□ -1.52
TFF1-201ENST00000291527 C15orf56Q8N910 161 aa5.57□□□□□ -1.52
TFF1-201ENST00000291527 IGLV4-69A0A075B6H9 119 aa5.56□□□□□ -1.52
TFF1-201ENST00000291527 TINCRA0A1B0GVN0 87 aa5.56□□□□□ -1.52
TFF1-201ENST00000291527 ZNF815PA8K554 130 aa5.56□□□□□ -1.52
TFF1-201ENST00000291527 LEPROTO15243 131 aa5.56□□□□□ -1.52
TFF1-201ENST00000291527 CEND1Q8N111 149 aa5.56□□□□□ -1.52
TFF1-201ENST00000291527 COPS9Q8WXC6 57 aa5.56□□□□□ -1.52
TFF1-201ENST00000291527 TMEM101Q96IK0 257 aa5.56□□□□□ -1.52
TFF1-201ENST00000291527 HIST1H4GQ99525 98 aa5.56□□□□□ -1.52
TFF1-201ENST00000291527 UBE2D4Q9Y2X8 147 aa5.56□□□□□ -1.52
TFF1-201ENST00000291527 IGKV2D-26A0A0A0MRZ7 120 aa5.55□□□□□ -1.52
TFF1-201ENST00000291527 UBE2L6O14933 153 aa5.55□□□□□ -1.52
TFF1-201ENST00000291527 CNBPP62633 177 aaKnown RBP5.55□□□□□ -1.52
TFF1-201ENST00000291527 HERVK_113P63121 156 aa5.55□□□□□ -1.52
TFF1-201ENST00000291527 UBE2V1Q13404 147 aa5.55□□□□□ -1.52
TFF1-201ENST00000291527 VAMP3Q15836 100 aa5.55□□□□□ -1.52
TFF1-201ENST00000291527 HIGD2BQ4VC39 106 aa5.55□□□□□ -1.52
TFF1-201ENST00000291527 C4orf48Q5BLP8 95 aa5.55□□□□□ -1.52
TFF1-201ENST00000291527 LYRM7Q5U5X0 104 aa5.55□□□□□ -1.52
TFF1-201ENST00000291527 Q6ZVH6 145 aa5.55□□□□□ -1.52
TFF1-201ENST00000291527 SPACA4Q8TDM5 124 aa5.55□□□□□ -1.52
TFF1-201ENST00000291527 GEMIN7Q9H840 131 aaKnown RBP5.55□□□□□ -1.52
TFF1-201ENST00000291527 SPANXB1Q9NS25 103 aaPredicted RBP5.55□□□□□ -1.52
TFF1-201ENST00000291527 IGKV3OR2-268A0A0C4DH90 116 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 TMEM223A0PJW6 202 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 GAGE12HA6NDE8 117 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 C9orf118A6NHY6 69 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 TMEM238C9JI98 176 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 J3QQQ9 107 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 TAX1BP3O14907 124 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 SRSF9Q13242 221 aaKnown RBP eCLIP5.54□□□□□ -1.52
TFF1-201ENST00000291527 AMMECR1LQ6DCA0 310 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 FAM19A3Q7Z5A8 133 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 LINC00526Q96FQ7 95 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 TMEM243Q9BU79 118 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 TP73-AS1Q9UF72 201 aa5.54□□□□□ -1.52
TFF1-201ENST00000291527 CCL25O15444 150 aa5.53□□□□□ -1.52
TFF1-201ENST00000291527 FABP2P12104 132 aa5.53□□□□□ -1.52
TFF1-201ENST00000291527 COX6A2Q02221 97 aa5.53□□□□□ -1.52
TFF1-201ENST00000291527 SFTA2Q6UW10 78 aa5.53□□□□□ -1.52
TFF1-201ENST00000291527 OR5A1Q8NGJ0 315 aa5.53□□□□□ -1.52
TFF1-201ENST00000291527 PLAC8Q9NZF1 115 aa5.53□□□□□ -1.52
TFF1-201ENST00000291527 IGHV3-64A0A075B6Q5 118 aa5.52□□□□□ -1.53
TFF1-201ENST00000291527 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.52□□□□□ -1.53
TFF1-201ENST00000291527 IGHV1-58A0A0C4DH39 117 aa5.52□□□□□ -1.53
TFF1-201ENST00000291527 A0A1B0GUV1 79 aa5.52□□□□□ -1.53
TFF1-201ENST00000291527 IGKV2-29A2NJV5 120 aaPredicted RBP5.52□□□□□ -1.53
TFF1-201ENST00000291527 ZNF22P17026 224 aaPredicted RBP5.52□□□□□ -1.53
TFF1-201ENST00000291527 Q6ZRU5 148 aa5.52□□□□□ -1.53
TFF1-201ENST00000291527 DPH3Q96FX2 82 aa5.52□□□□□ -1.53
TFF1-201ENST00000291527 IGLV5-45A0A087WSX0 123 aa5.51□□□□□ -1.53
TFF1-201ENST00000291527 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.51□□□□□ -1.53
TFF1-201ENST00000291527 IGKV2-24A0A0C4DH68 120 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms