RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 LINC01561Q8N1V8 128 aa2.95□□□□□ -1.94
SCN3A-201ENST00000283254 CIRBP-AS1Q8TBR5 109 aa2.95□□□□□ -1.94
SCN3A-201ENST00000283254 PTPRSQ13332 1948 aa2.95□□□□□ -1.94
SCN3A-201ENST00000283254 MPLKIPQ8TAP9 179 aa2.95□□□□□ -1.94
SCN3A-201ENST00000283254 RNASE8Q8TDE3 154 aaKnown RBP2.95□□□□□ -1.94
SCN3A-201ENST00000283254 FAM30AQ9NZY2 134 aa2.95□□□□□ -1.94
SCN3A-201ENST00000283254 AKAP13Q12802 2813 aa2.95□□□□□ -1.94
SCN3A-201ENST00000283254 BRWD1-AS2P59051 145 aa2.95□□□□□ -1.94
SCN3A-201ENST00000283254 OXLD1Q5BKU9 147 aa2.95□□□□□ -1.94
SCN3A-201ENST00000283254 HRCT1Q6UXD1 115 aa2.95□□□□□ -1.94
SCN3A-201ENST00000283254 Q9BRP9 147 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 WFDC10AQ9H1F0 79 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 GDF5OSQ5U4N7 250 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 C10orf99Q6UWK7 81 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 LINC00242Q5T6M2 205 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 COX7CP15954 63 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 LINC01556Q5JQF7 62 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 Q8N814 137 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 CELA1Q9UNI1 258 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 PCNX3Q9H6A9 2034 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 NUP210LQ5VU65 1888 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 SMIM26A0A096LP01 95 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 MT-ATP8P03928 68 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 UNQ6190/PRO20217Q6UXQ8 127 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 TP53AIP1Q9HCN2 124 aa2.94□□□□□ -1.94
SCN3A-201ENST00000283254 EDN2P20800 178 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 C6orf223Q8N319 242 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 SMIM1B2RUZ4 78 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 Q6ZTC4 211 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 X6R8D5 127 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 TRAV7A0A075B6U4 112 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 BEAN1Q3B7T3 259 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 LINC00526Q96FQ7 95 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 UTP20O75691 2785 aaKnown RBP2.93□□□□□ -1.94
SCN3A-201ENST00000283254 SMIM11BQ8TCY0 68 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 ATG2AQ2TAZ0 1938 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 LINC00208Q96KT6 92 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 IGSF10Q6WRI0 2623 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 C22orf34Q6ZV56 151 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 POM121L12Q8N7R1 296 aa2.93□□□□□ -1.94
SCN3A-201ENST00000283254 MRPS12O15235 138 aaKnown RBP2.92□□□□□ -1.94
SCN3A-201ENST00000283254 EXPH5Q8NEV8 1989 aa2.92□□□□□ -1.94
SCN3A-201ENST00000283254 PRR4Q16378 134 aa2.92□□□□□ -1.94
SCN3A-201ENST00000283254 PRR9Q5T870 116 aa2.92□□□□□ -1.94
SCN3A-201ENST00000283254 A0A087WSZ3 146 aa2.92□□□□□ -1.94
SCN3A-201ENST00000283254 COX6A2Q02221 97 aa2.92□□□□□ -1.94
SCN3A-201ENST00000283254 ZNF106Q9H2Y7 1883 aaKnown RBP2.92□□□□□ -1.94
SCN3A-201ENST00000283254 Q6Q795 121 aa2.92□□□□□ -1.94
SCN3A-201ENST00000283254 PLA2G2EQ9NZK7 142 aa2.92□□□□□ -1.94
SCN3A-201ENST00000283254 KIAA1549LQ6ZVL6 1849 aa2.92□□□□□ -1.94
SCN3A-201ENST00000283254 FAM229AH3BQW9 127 aa2.92□□□□□ -1.94
SCN3A-201ENST00000283254 C1orf229Q6ZS94 237 aaPredicted RBP2.92□□□□□ -1.94
SCN3A-201ENST00000283254 ZNF295-AS1Q8N0V1 137 aa2.92□□□□□ -1.94
SCN3A-201ENST00000283254 LINC01547P58512 204 aaPredicted RBP2.92□□□□□ -1.94
SCN3A-201ENST00000283254 HCG22E2RYF7 251 aa2.91□□□□□ -1.94
SCN3A-201ENST00000283254 SNURFQ9Y675 71 aa2.91□□□□□ -1.94
SCN3A-201ENST00000283254 IGIPA6NJ69 53 aa2.91□□□□□ -1.94
SCN3A-201ENST00000283254 FHL3Q13643 280 aa2.91□□□□□ -1.94
SCN3A-201ENST00000283254 C11orf21Q9P2W6 132 aa2.91□□□□□ -1.94
SCN3A-201ENST00000283254 H3BNG1 76 aa2.91□□□□□ -1.94
SCN3A-201ENST00000283254 CRYGAP11844 174 aa2.91□□□□□ -1.94
SCN3A-201ENST00000283254 PROK1P58294 105 aa2.91□□□□□ -1.94
SCN3A-201ENST00000283254 FHL2Q14192 279 aa2.91□□□□□ -1.94
SCN3A-201ENST00000283254 AMELXQ99217 191 aa2.91□□□□□ -1.94
SCN3A-201ENST00000283254 WISP2O76076 250 aa2.9□□□□□ -1.94
SCN3A-201ENST00000283254 COX8CQ7Z4L0 72 aa2.9□□□□□ -1.94
SCN3A-201ENST00000283254 Q8N3U1 123 aa2.9□□□□□ -1.94
SCN3A-201ENST00000283254 COL4A4P53420 1690 aaPredicted RBP2.9□□□□□ -1.94
SCN3A-201ENST00000283254 SPINK1P00995 79 aa2.9□□□□□ -1.95
SCN3A-201ENST00000283254 PLA2G1BP04054 148 aaKnown RBP2.9□□□□□ -1.95
SCN3A-201ENST00000283254 CRIP1P50238 77 aa2.9□□□□□ -1.95
SCN3A-201ENST00000283254 LYPD5Q6UWN5 251 aa2.9□□□□□ -1.95
SCN3A-201ENST00000283254 LINC00575Q6W349 94 aa2.9□□□□□ -1.95
SCN3A-201ENST00000283254 TEX15Q9BXT5 2789 aa2.9□□□□□ -1.95
SCN3A-201ENST00000283254 TMEM254Q8TBM7 123 aa2.9□□□□□ -1.95
SCN3A-201ENST00000283254 A8MZ25 164 aa2.9□□□□□ -1.95
SCN3A-201ENST00000283254 A0A0U1RQV1 116 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 CXCL6P80162 114 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 MAPKAPK5-AS1Q8N8E1 139 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 RETNQ9HD89 108 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 AVPP01185 164 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 C9orf116Q5BN46 136 aaPredicted RBP2.89□□□□□ -1.95
SCN3A-201ENST00000283254 MDFIQ99750 246 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 COL5A1P20908 1838 aaPredicted RBP2.89□□□□□ -1.95
SCN3A-201ENST00000283254 Q6ZPA2 131 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 H0Y9P7 68 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 KIF25-AS1Q9Y6Z4 181 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 Q8NBF4 154 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 RAI1Q7Z5J4 1906 aaPredicted RBP2.89□□□□□ -1.95
SCN3A-201ENST00000283254 TRBV7-7A0A0K0K1E9 115 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 Q6ZRP5 223 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 LRP4O75096 1905 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 NSD1Q96L73 2696 aaPredicted RBP2.89□□□□□ -1.95
SCN3A-201ENST00000283254 IGKV2D-30A0A075B6S6 120 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 IGKV2-30P06310 120 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 C18orf65Q6ZTR6 163 aa2.89□□□□□ -1.95
SCN3A-201ENST00000283254 H3BPC8 53 aa2.88□□□□□ -1.95
SCN3A-201ENST00000283254 ADAMTS20P59510 1910 aa2.88□□□□□ -1.95
SCN3A-201ENST00000283254 C1orf195Q5TG92 126 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms