RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 CDC42SE2Q9NRR3 84 aa3.15□□□□□ -1.9
VPS13C-202ENST00000261517 K7ERS5 55 aa3.15□□□□□ -1.9
VPS13C-202ENST00000261517 COL6A5A8TX70 2615 aa3.15□□□□□ -1.9
VPS13C-202ENST00000261517 CDKN2A-AS1Q9UH64 79 aa3.15□□□□□ -1.9
VPS13C-202ENST00000261517 LINC00959A0A1B0GUT2 108 aa3.15□□□□□ -1.9
VPS13C-202ENST00000261517 NDUFS5O43920 106 aa3.15□□□□□ -1.91
VPS13C-202ENST00000261517 RNASE13Q5GAN3 156 aaKnown RBP3.15□□□□□ -1.91
VPS13C-202ENST00000261517 GDF5OSQ5U4N7 250 aa3.14□□□□□ -1.91
VPS13C-202ENST00000261517 PRB1P04280 392 aa3.14□□□□□ -1.91
VPS13C-202ENST00000261517 RNASE8Q8TDE3 154 aaKnown RBP3.14□□□□□ -1.91
VPS13C-202ENST00000261517 ITPR1Q14643 2758 aa3.14□□□□□ -1.91
VPS13C-202ENST00000261517 IGLV10-54A0A075B6I4 117 aa3.14□□□□□ -1.91
VPS13C-202ENST00000261517 FAM236AA0A1B0GUQ0 79 aa3.14□□□□□ -1.91
VPS13C-202ENST00000261517 FAM236BA0A1B0GV22 79 aa3.14□□□□□ -1.91
VPS13C-202ENST00000261517 A0A096LPF7 62 aa3.14□□□□□ -1.91
VPS13C-202ENST00000261517 TRBV10-3A0A0K0K1G6 114 aa3.14□□□□□ -1.91
VPS13C-202ENST00000261517 INAFM1C9JVW0 142 aa3.14□□□□□ -1.91
VPS13C-202ENST00000261517 NCR3O14931 201 aa3.13□□□□□ -1.91
VPS13C-202ENST00000261517 ZNF73O43830 326 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-202ENST00000261517 C1orf229Q6ZS94 237 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-202ENST00000261517 NUPR1O60356 82 aa3.13□□□□□ -1.91
VPS13C-202ENST00000261517 FSHBP01225 129 aa3.13□□□□□ -1.91
VPS13C-202ENST00000261517 DEFB105AQ8NG35 78 aa3.13□□□□□ -1.91
VPS13C-202ENST00000261517 LIMD2Q9BT23 127 aa3.13□□□□□ -1.91
VPS13C-202ENST00000261517 NDUFV3P56181 108 aaKnown RBP3.13□□□□□ -1.91
VPS13C-202ENST00000261517 SERP2Q8N6R1 65 aa3.13□□□□□ -1.91
VPS13C-202ENST00000261517 C10orf25Q5T742 122 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 USP17L23D6RBM5 183 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-202ENST00000261517 CRYBG3Q68DQ2 2970 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 TRIAP1O43715 76 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 C3orf22Q8N5N4 141 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 C22orf34Q6ZV56 151 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 FAM19A4Q96LR4 140 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 FAM19A3Q7Z5A8 133 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 WISP2O76076 250 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 ODF3L2Q3SX64 289 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 CCKP06307 115 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 WFDC2Q14508 124 aa3.12□□□□□ -1.91
VPS13C-202ENST00000261517 FAM19A1Q7Z5A9 133 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 BAHCC1Q9P281 2608 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 H0Y9J4 135 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 IGHV4-30-4P0DP06 118 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 LINC01556Q5JQF7 62 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 CXCL6P80162 114 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 TEX49A0A1B0GTD5 131 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 H3BPC8 53 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 SELENOKQ9Y6D0 94 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 FHL2Q14192 279 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 CLEC2BQ92478 149 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 NF1P21359 2839 aa3.11□□□□□ -1.91
VPS13C-202ENST00000261517 IGLV5-45A0A087WSX0 123 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 PROK1P58294 105 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 WFDC9Q8NEX5 89 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 NRGNQ92686 78 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 REG3GQ6UW15 175 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 C2orf91Q6ZV80 131 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 TRAV7A0A075B6U4 112 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 BBC3Q96PG8 261 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-202ENST00000261517 LINC00242Q5T6M2 205 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 TP53AIP1Q9HCN2 124 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 UBR5O95071 2799 aaPredicted RBP3.1□□□□□ -1.91
VPS13C-202ENST00000261517 CASC2Q6XLA1 102 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 C14orf132Q9NPU4 83 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 IGLV5-39A0A0G2JS06 123 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 Q8N814 137 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 IGLV2-18A0A075B6J9 118 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 SMIM1B2RUZ4 78 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 C6orf99Q4VX62 202 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 FAM236DA0A1B0GTK5 79 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 FAM236CP0DP71 79 aa3.1□□□□□ -1.91
VPS13C-202ENST00000261517 LRBAP50851 2863 aa3.09□□□□□ -1.91
VPS13C-202ENST00000261517 NOTCH1P46531 2555 aa3.09□□□□□ -1.91
VPS13C-202ENST00000261517 UTP20O75691 2785 aaKnown RBP3.09□□□□□ -1.91
VPS13C-202ENST00000261517 ZANQ9Y493 2812 aa3.09□□□□□ -1.92
VPS13C-202ENST00000261517 NSD1Q96L73 2696 aaPredicted RBP3.09□□□□□ -1.92
VPS13C-202ENST00000261517 CYSRT1A8MQ03 144 aa3.09□□□□□ -1.92
VPS13C-202ENST00000261517 GVQW2A0A096LPI5 108 aaPredicted RBP3.09□□□□□ -1.92
VPS13C-202ENST00000261517 A8MTW9 85 aa3.09□□□□□ -1.92
VPS13C-202ENST00000261517 IGKV4-1P06312 121 aa3.09□□□□□ -1.92
VPS13C-202ENST00000261517 C11orf21Q9P2W6 132 aa3.09□□□□□ -1.92
VPS13C-202ENST00000261517 PRR9Q5T870 116 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 NTM-AS1Q6ZSK4 140 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 SMIM11BQ8TCY0 68 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 DEFB104AQ8WTQ1 72 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 RPL37AP61513 92 aaKnown RBP3.08□□□□□ -1.92
VPS13C-202ENST00000261517 HIGD2AQ9BW72 106 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 IGKV3D-7A0A0C4DH55 119 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 COX7CP15954 63 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 FRMD6-AS1P0C7T7 363 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 NIPBLQ6KC79 2804 aaeCLIP3.08□□□□□ -1.92
VPS13C-202ENST00000261517 C1orf158Q8N1D5 194 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 A0A0J9YWU9 116 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 PLAC8L1A1L4L8 177 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 C5orf47Q569G3 176 aa3.08□□□□□ -1.92
VPS13C-202ENST00000261517 KMT2BQ9UMN6 2715 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-202ENST00000261517 DCHS1Q96JQ0 3298 aa3.07□□□□□ -1.92
VPS13C-202ENST00000261517 C11orf72Q8NBR9 251 aa3.07□□□□□ -1.92
VPS13C-202ENST00000261517 hDV103S1A0JD37 113 aa3.07□□□□□ -1.92
VPS13C-202ENST00000261517 A8MZ25 164 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms