RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 CFAP46Q8IYW2 2715 aa8.01□□□□□ -1.13
TROAP-201ENST00000257909 LINC00959A0A1B0GUT2 108 aa8□□□□□ -1.13
TROAP-201ENST00000257909 Q8IZM0 81 aa8□□□□□ -1.13
TROAP-201ENST00000257909 C16orf74Q96GX8 76 aa8□□□□□ -1.13
TROAP-201ENST00000257909 FLNCQ14315 2725 aa8□□□□□ -1.13
TROAP-201ENST00000257909 A0A096LNT2 108 aa7.99□□□□□ -1.13
TROAP-201ENST00000257909 TRGV4A0A0C4DH28 118 aa7.99□□□□□ -1.13
TROAP-201ENST00000257909 KHDC1LQ5JSQ8 128 aa7.99□□□□□ -1.13
TROAP-201ENST00000257909 MXRA5Q9NR99 2828 aa7.99□□□□□ -1.13
TROAP-201ENST00000257909 H7BZZ5 65 aa7.99□□□□□ -1.13
TROAP-201ENST00000257909 C11orf68Q9H3H3 251 aaKnown RBP7.99□□□□□ -1.13
TROAP-201ENST00000257909 LINC00336Q6ZUF6 198 aa7.98□□□□□ -1.13
TROAP-201ENST00000257909 PKIGQ9Y2B9 76 aa7.98□□□□□ -1.13
TROAP-201ENST00000257909 KLKP1Q107X0 134 aa7.98□□□□□ -1.13
TROAP-201ENST00000257909 V9GYY9 64 aa7.98□□□□□ -1.13
TROAP-201ENST00000257909 USP9XQ93008 2570 aaPredicted RBP7.97□□□□□ -1.13
TROAP-201ENST00000257909 RBM3P98179 157 aaKnown RBP7.97□□□□□ -1.13
TROAP-201ENST00000257909 Q6ZQT0 140 aa7.97□□□□□ -1.13
TROAP-201ENST00000257909 AKAP9Q99996 3911 aa7.97□□□□□ -1.13
TROAP-201ENST00000257909 LOC110117498A0A087WWA1 95 aa7.97□□□□□ -1.13
TROAP-201ENST00000257909 PLAC8L1A1L4L8 177 aa7.97□□□□□ -1.13
TROAP-201ENST00000257909 COX17Q14061 63 aa7.97□□□□□ -1.13
TROAP-201ENST00000257909 FBN2P35556 2912 aa7.96□□□□□ -1.13
TROAP-201ENST00000257909 ZNF561-AS1K7EIQ3 104 aa7.96□□□□□ -1.14
TROAP-201ENST00000257909 RNASE1P07998 156 aaKnown RBP7.96□□□□□ -1.14
TROAP-201ENST00000257909 LINC00482Q8N8I6 264 aa7.96□□□□□ -1.14
TROAP-201ENST00000257909 C2CD3Q4AC94 2353 aa7.95□□□□□ -1.14
TROAP-201ENST00000257909 FSHBP01225 129 aa7.95□□□□□ -1.14
TROAP-201ENST00000257909 PRR3P79522 188 aaKnown RBP7.95□□□□□ -1.14
TROAP-201ENST00000257909 CR1P17927 2039 aa7.95□□□□□ -1.14
TROAP-201ENST00000257909 PKD1L2Q7Z442 2459 aa7.95□□□□□ -1.14
TROAP-201ENST00000257909 LINC01547P58512 204 aaPredicted RBP7.95□□□□□ -1.14
TROAP-201ENST00000257909 MAPK1IP1LQ8NDC0 245 aa7.95□□□□□ -1.14
TROAP-201ENST00000257909 DOPEY1Q5JWR5 2465 aa7.94□□□□□ -1.14
TROAP-201ENST00000257909 C6orf99Q4VX62 202 aa7.94□□□□□ -1.14
TROAP-201ENST00000257909 LINC00575Q6W349 94 aa7.94□□□□□ -1.14
TROAP-201ENST00000257909 ANKRD17O75179 2603 aaKnown RBP7.94□□□□□ -1.14
TROAP-201ENST00000257909 USP9YO00507 2555 aaPredicted RBP7.94□□□□□ -1.14
TROAP-201ENST00000257909 CMC4P56277 68 aaPredicted RBP7.94□□□□□ -1.14
TROAP-201ENST00000257909 C6orf223Q8N319 242 aa7.94□□□□□ -1.14
TROAP-201ENST00000257909 A0A1B0GUV1 79 aa7.93□□□□□ -1.14
TROAP-201ENST00000257909 PDE6GP18545 87 aa7.93□□□□□ -1.14
TROAP-201ENST00000257909 H3BQ85 93 aa7.93□□□□□ -1.14
TROAP-201ENST00000257909 GIG44P09565 113 aaPredicted RBP7.93□□□□□ -1.14
TROAP-201ENST00000257909 CXCL6P80162 114 aa7.93□□□□□ -1.14
TROAP-201ENST00000257909 LAMTOR3Q9UHA4 124 aa7.93□□□□□ -1.14
TROAP-201ENST00000257909 SMIM26A0A096LP01 95 aa7.92□□□□□ -1.14
TROAP-201ENST00000257909 HAMPP81172 84 aa7.92□□□□□ -1.14
TROAP-201ENST00000257909 Q6ZVQ6 151 aa7.92□□□□□ -1.14
TROAP-201ENST00000257909 POLQO75417 2590 aa7.92□□□□□ -1.14
TROAP-201ENST00000257909 NDUFC1O43677 76 aa7.92□□□□□ -1.14
TROAP-201ENST00000257909 IGHV4-28A0A0C4DH34 117 aa7.91□□□□□ -1.14
TROAP-201ENST00000257909 TRAV10A0A0B4J240 114 aa7.9□□□□□ -1.14
TROAP-201ENST00000257909 C9orf66Q5T8R8 295 aa7.9□□□□□ -1.14
TROAP-201ENST00000257909 CUBNO60494 3623 aa7.9□□□□□ -1.14
TROAP-201ENST00000257909 KIAA0087Q14695 138 aa7.9□□□□□ -1.15
TROAP-201ENST00000257909 C1orf195Q5TG92 126 aa7.9□□□□□ -1.15
TROAP-201ENST00000257909 F8WEM9 126 aa7.89□□□□□ -1.15
TROAP-201ENST00000257909 ATP5EP56381 51 aaPredicted RBP7.89□□□□□ -1.15
TROAP-201ENST00000257909 SNURFQ9Y675 71 aa7.89□□□□□ -1.15
TROAP-201ENST00000257909 IGSF10Q6WRI0 2623 aa7.89□□□□□ -1.15
TROAP-201ENST00000257909 RMI2Q96E14 147 aa7.89□□□□□ -1.15
TROAP-201ENST00000257909 NOTCH3Q9UM47 2321 aa7.89□□□□□ -1.15
TROAP-201ENST00000257909 ZNF469Q96JG9 3925 aaPredicted RBP7.88□□□□□ -1.15
TROAP-201ENST00000257909 CD164L2Q6UWJ8 174 aa7.88□□□□□ -1.15
TROAP-201ENST00000257909 CSNK1G2-AS1Q8NCQ2 148 aa7.88□□□□□ -1.15
TROAP-201ENST00000257909 MUC7Q8TAX7 377 aa7.88□□□□□ -1.15
TROAP-201ENST00000257909 M0R2N4 97 aa7.87□□□□□ -1.15
TROAP-201ENST00000257909 CCL24O00175 119 aa7.87□□□□□ -1.15
TROAP-201ENST00000257909 Q8N3U1 123 aa7.87□□□□□ -1.15
TROAP-201ENST00000257909 TEX15Q9BXT5 2789 aa7.87□□□□□ -1.15
TROAP-201ENST00000257909 CLPSL2Q6UWE3 100 aa7.87□□□□□ -1.15
TROAP-201ENST00000257909 C16orf95Q9H693 158 aa7.87□□□□□ -1.15
TROAP-201ENST00000257909 GYPEP15421 78 aa7.86□□□□□ -1.15
TROAP-201ENST00000257909 FP248Q71RG6 208 aaPredicted RBP7.86□□□□□ -1.15
TROAP-201ENST00000257909 CHD6Q8TD26 2715 aa7.86□□□□□ -1.15
TROAP-201ENST00000257909 IGHV4-31P0DP07 118 aa7.86□□□□□ -1.15
TROAP-201ENST00000257909 PLA2G2AP14555 144 aa7.86□□□□□ -1.15
TROAP-201ENST00000257909 CENPEQ02224 2701 aa7.85□□□□□ -1.15
TROAP-201ENST00000257909 ZNF843Q8N446 348 aa7.85□□□□□ -1.15
TROAP-201ENST00000257909 Q8NDZ9 215 aa7.85□□□□□ -1.15
TROAP-201ENST00000257909 WNK1Q9H4A3 2382 aa7.85□□□□□ -1.15
TROAP-201ENST00000257909 TRBV7-4A0A0J9YYF1 115 aa7.85□□□□□ -1.15
TROAP-201ENST00000257909 C9orf116Q5BN46 136 aaPredicted RBP7.85□□□□□ -1.15
TROAP-201ENST00000257909 Q6ZQY7 126 aa7.85□□□□□ -1.15
TROAP-201ENST00000257909 MYO9AB2RTY4 2548 aa7.85□□□□□ -1.15
TROAP-201ENST00000257909 IGLV6-57P01721 117 aa7.84□□□□□ -1.15
TROAP-201ENST00000257909 LINC00269Q8N2A0 174 aa7.84□□□□□ -1.15
TROAP-201ENST00000257909 TRBV7-6A0A0J9YX20 115 aa7.84□□□□□ -1.15
TROAP-201ENST00000257909 MIFP14174 115 aa7.84□□□□□ -1.15
TROAP-201ENST00000257909 WFDC11Q8NEX6 87 aa7.84□□□□□ -1.15
TROAP-201ENST00000257909 CHCHD10Q8WYQ3 142 aaPredicted RBP7.84□□□□□ -1.15
TROAP-201ENST00000257909 TM2D3Q9BRN9 247 aa7.84□□□□□ -1.15
TROAP-201ENST00000257909 WFDC10AQ9H1F0 79 aa7.84□□□□□ -1.15
TROAP-201ENST00000257909 DEFB130BP0DP73 79 aa7.83□□□□□ -1.16
TROAP-201ENST00000257909 DEFB130AP0DP74 79 aa7.83□□□□□ -1.16
TROAP-201ENST00000257909 SPATA3Q8NHX4 192 aa7.83□□□□□ -1.16
TROAP-201ENST00000257909 NBPF19A0A087WUL8 3843 aa7.83□□□□□ -1.16
TROAP-201ENST00000257909 MYO18BQ8IUG5 2567 aa7.83□□□□□ -1.16
TROAP-201ENST00000257909 PIEZO1Q92508 2521 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms