RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 NDUFA1O15239 70 aa8.57□□□□□ -1.04
LSM8-201ENST00000249299 KIAA0087Q14695 138 aa8.57□□□□□ -1.04
LSM8-201ENST00000249299 C14orf177Q52M58 125 aa8.57□□□□□ -1.04
LSM8-201ENST00000249299 C6orf226Q5I0X4 101 aa8.57□□□□□ -1.04
LSM8-201ENST00000249299 C6orf223Q8N319 242 aa8.57□□□□□ -1.04
LSM8-201ENST00000249299 ORAOV1Q8WV07 137 aa8.57□□□□□ -1.04
LSM8-201ENST00000249299 C2orf48Q96LS8 159 aa8.57□□□□□ -1.04
LSM8-201ENST00000249299 UQCR10Q9UDW1 63 aa8.57□□□□□ -1.04
LSM8-201ENST00000249299 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
LSM8-201ENST00000249299 LCE6AA0A183 80 aa8.56□□□□□ -1.04
LSM8-201ENST00000249299 PSCAO43653 123 aa8.56□□□□□ -1.04
LSM8-201ENST00000249299 Q6ZRN7 208 aaPredicted RBP8.56□□□□□ -1.04
LSM8-201ENST00000249299 ZNF815PA8K554 130 aa8.55□□□□□ -1.04
LSM8-201ENST00000249299 ZNF561-AS1K7EIQ3 104 aa8.55□□□□□ -1.04
LSM8-201ENST00000249299 TSPEAR-AS2P59090 65 aa8.55□□□□□ -1.04
LSM8-201ENST00000249299 SPAG11BQ08648 103 aa8.55□□□□□ -1.04
LSM8-201ENST00000249299 C1orf134Q5TEV5 83 aa8.55□□□□□ -1.04
LSM8-201ENST00000249299 PCP2Q8IVA1 136 aa8.55□□□□□ -1.04
LSM8-201ENST00000249299 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
LSM8-201ENST00000249299 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
LSM8-201ENST00000249299 ZNF625Q96I27 306 aaPredicted RBP8.55□□□□□ -1.04
LSM8-201ENST00000249299 MIEN1Q9BRT3 115 aa8.55□□□□□ -1.04
LSM8-201ENST00000249299 CKS1BP61024 79 aa8.54□□□□□ -1.04
LSM8-201ENST00000249299 C14orf144Q96I85 54 aa8.54□□□□□ -1.04
LSM8-201ENST00000249299 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
LSM8-201ENST00000249299 ALMS1Q8TCU4 4167 aa8.54□□□□□ -1.04
LSM8-201ENST00000249299 USP17L23D6RBM5 183 aa8.54□□□□□ -1.04
LSM8-201ENST00000249299 TIMM17BO60830 172 aa8.54□□□□□ -1.04
LSM8-201ENST00000249299 NTN5Q8WTR8 489 aaPredicted RBP8.54□□□□□ -1.04
LSM8-201ENST00000249299 HIGD1BQ9P298 99 aa8.54□□□□□ -1.04
LSM8-201ENST00000249299 M0R2N4 97 aa8.53□□□□□ -1.04
LSM8-201ENST00000249299 TRBV30A0A0K0K1B3 111 aa8.52□□□□□ -1.05
LSM8-201ENST00000249299 CIRBPQ14011 172 aaKnown RBP8.52□□□□□ -1.05
LSM8-201ENST00000249299 COX17Q14061 63 aa8.52□□□□□ -1.05
LSM8-201ENST00000249299 A0A0J9YXY3 114 aa8.51□□□□□ -1.05
LSM8-201ENST00000249299 LRCOL1A6NCL2 159 aa8.51□□□□□ -1.05
LSM8-201ENST00000249299 GCSHP23434 173 aa8.51□□□□□ -1.05
LSM8-201ENST00000249299 RNF151Q2KHN1 245 aa8.51□□□□□ -1.05
LSM8-201ENST00000249299 SCGB1D4Q6XE38 83 aa8.51□□□□□ -1.05
LSM8-201ENST00000249299 Q6ZVH6 145 aa8.51□□□□□ -1.05
LSM8-201ENST00000249299 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
LSM8-201ENST00000249299 DNAH6Q9C0G6 4158 aa8.5□□□□□ -1.05
LSM8-201ENST00000249299 KRTAP4-8A0A0G2JLE6 195 aa8.5□□□□□ -1.05
LSM8-201ENST00000249299 TTTY13Q9BZ97 58 aa8.5□□□□□ -1.05
LSM8-201ENST00000249299 PRO1933Q9H354 126 aa8.5□□□□□ -1.05
LSM8-201ENST00000249299 PPDPFQ9H3Y8 114 aa8.5□□□□□ -1.05
LSM8-201ENST00000249299 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
LSM8-201ENST00000249299 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
LSM8-201ENST00000249299 CAMK2N2Q96S95 79 aa8.49□□□□□ -1.05
LSM8-201ENST00000249299 SPANXB1Q9NS25 103 aaPredicted RBP8.49□□□□□ -1.05
LSM8-201ENST00000249299 SYCNQ0VAF6 134 aa8.48□□□□□ -1.05
LSM8-201ENST00000249299 TAL2Q16559 108 aa8.48□□□□□ -1.05
LSM8-201ENST00000249299 HIGD2BQ4VC39 106 aa8.48□□□□□ -1.05
LSM8-201ENST00000249299 COPS9Q8WXC6 57 aa8.48□□□□□ -1.05
LSM8-201ENST00000249299 KMT2AQ03164 3969 aa8.47□□□□□ -1.05
LSM8-201ENST00000249299 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.47□□□□□ -1.05
LSM8-201ENST00000249299 DDTP30046 118 aa8.47□□□□□ -1.05
LSM8-201ENST00000249299 HNRNPA3P51991 378 aaKnown RBP8.47□□□□□ -1.05
LSM8-201ENST00000249299 PTTG1IPP53801 180 aa8.47□□□□□ -1.05
LSM8-201ENST00000249299 C2orf82Q6UX34 121 aa8.47□□□□□ -1.05
LSM8-201ENST00000249299 UNQ6190/PRO20217Q6UXQ8 127 aa8.47□□□□□ -1.05
LSM8-201ENST00000249299 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
LSM8-201ENST00000249299 PKIGQ9Y2B9 76 aa8.47□□□□□ -1.05
LSM8-201ENST00000249299 A0A087WTM6 91 aa8.46□□□□□ -1.06
LSM8-201ENST00000249299 IFITM1P13164 125 aa8.46□□□□□ -1.06
LSM8-201ENST00000249299 SPANXDQ9BXN6 97 aa8.46□□□□□ -1.06
LSM8-201ENST00000249299 SPANXCQ9NY87 97 aa8.46□□□□□ -1.06
LSM8-201ENST00000249299 TP73-AS1Q9UF72 201 aa8.46□□□□□ -1.06
LSM8-201ENST00000249299 ERG28Q9UKR5 140 aa8.46□□□□□ -1.06
LSM8-201ENST00000249299 TLX1NBP0CAT3 122 aa8.45□□□□□ -1.06
LSM8-201ENST00000249299 MEIG1Q5JSS6 88 aa8.45□□□□□ -1.06
LSM8-201ENST00000249299 Q8N814 137 aa8.45□□□□□ -1.06
LSM8-201ENST00000249299 CARD19Q96LW7 228 aa8.45□□□□□ -1.06
LSM8-201ENST00000249299 LITAFQ99732 161 aa8.45□□□□□ -1.06
LSM8-201ENST00000249299 HSD52Q0P140 79 aa8.44□□□□□ -1.06
LSM8-201ENST00000249299 WFDC2Q14508 124 aa8.44□□□□□ -1.06
LSM8-201ENST00000249299 C10orf25Q5T742 122 aa8.44□□□□□ -1.06
LSM8-201ENST00000249299 Q6ZRU5 148 aa8.44□□□□□ -1.06
LSM8-201ENST00000249299 LINC00336Q6ZUF6 198 aa8.44□□□□□ -1.06
LSM8-201ENST00000249299 C6orf48Q9UBA6 75 aa8.44□□□□□ -1.06
LSM8-201ENST00000249299 LOC107984156A0A0G2JMH3 177 aa8.43□□□□□ -1.06
LSM8-201ENST00000249299 LECT2O14960 151 aa8.43□□□□□ -1.06
LSM8-201ENST00000249299 RTL8CO15255 209 aa8.43□□□□□ -1.06
LSM8-201ENST00000249299 SRSF9Q13242 221 aaKnown RBP eCLIP8.43□□□□□ -1.06
LSM8-201ENST00000249299 ARL17AQ8IVW1 177 aa8.43□□□□□ -1.06
LSM8-201ENST00000249299 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
LSM8-201ENST00000249299 NDUFC2-KCTD14E9PQ53 114 aa8.42□□□□□ -1.06
LSM8-201ENST00000249299 SLPIP03973 132 aa8.42□□□□□ -1.06
LSM8-201ENST00000249299 LINC00158P58513 81 aa8.42□□□□□ -1.06
LSM8-201ENST00000249299 SMIM13P0DJ93 91 aa8.41□□□□□ -1.06
LSM8-201ENST00000249299 HIST1H4GQ99525 98 aa8.41□□□□□ -1.06
LSM8-201ENST00000249299 SACSQ9NZJ4 4579 aa8.41□□□□□ -1.06
LSM8-201ENST00000249299 M0R143 59 aa8.4□□□□□ -1.06
LSM8-201ENST00000249299 ADAMTSL4-AS1Q5T5F5 129 aa8.4□□□□□ -1.06
LSM8-201ENST00000249299 C9orf163Q8N9P6 203 aa8.4□□□□□ -1.06
LSM8-201ENST00000249299 DNAH2Q9P225 4427 aa8.4□□□□□ -1.07
LSM8-201ENST00000249299 PFN2P35080 140 aa8.39□□□□□ -1.07
LSM8-201ENST00000249299 CTAG1AP78358 180 aa8.39□□□□□ -1.07
LSM8-201ENST00000249299 RPL24P83731 157 aaKnown RBP8.39□□□□□ -1.07
LSM8-201ENST00000249299 CEND1Q8N111 149 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms