RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 F8WDY8 70 aa11.58□□□□□ -0.56
PFN1-201ENST00000225655 C9orf163Q8N9P6 203 aa11.58□□□□□ -0.56
PFN1-201ENST00000225655 IGLV4-69A0A075B6H9 119 aa11.57□□□□□ -0.56
PFN1-201ENST00000225655 PLNP26678 52 aa11.57□□□□□ -0.56
PFN1-201ENST00000225655 TMEM170BQ5T4T1 132 aa11.57□□□□□ -0.56
PFN1-201ENST00000225655 C2orf48Q96LS8 159 aa11.57□□□□□ -0.56
PFN1-201ENST00000225655 CAMK2N2Q96S95 79 aa11.57□□□□□ -0.56
PFN1-201ENST00000225655 MRPL35Q9NZE8 188 aaKnown RBP11.56□□□□□ -0.56
PFN1-201ENST00000225655 C11orf86A6NJI1 115 aa11.55□□□□□ -0.56
PFN1-201ENST00000225655 SYCNQ0VAF6 134 aa11.55□□□□□ -0.56
PFN1-201ENST00000225655 ODF1Q14990 250 aa11.55□□□□□ -0.56
PFN1-201ENST00000225655 CARD19Q96LW7 228 aa11.55□□□□□ -0.56
PFN1-201ENST00000225655 TOMM7Q9P0U1 55 aa11.55□□□□□ -0.56
PFN1-201ENST00000225655 SYS1-DBNDD2H3BUS1 97 aa11.54□□□□□ -0.56
PFN1-201ENST00000225655 NDUFA1O15239 70 aa11.54□□□□□ -0.56
PFN1-201ENST00000225655 ZNF22P17026 224 aaPredicted RBP11.54□□□□□ -0.56
PFN1-201ENST00000225655 CKS1BP61024 79 aa11.54□□□□□ -0.56
PFN1-201ENST00000225655 C6orf226Q5I0X4 101 aa11.54□□□□□ -0.56
PFN1-201ENST00000225655 PET117Q6UWS5 81 aa11.54□□□□□ -0.56
PFN1-201ENST00000225655 Q8IZM0 81 aa11.54□□□□□ -0.56
PFN1-201ENST00000225655 C20orf202A1L168 122 aa11.53□□□□□ -0.56
PFN1-201ENST00000225655 SMIM1B2RUZ4 78 aa11.53□□□□□ -0.56
PFN1-201ENST00000225655 DPM2O94777 84 aa11.53□□□□□ -0.56
PFN1-201ENST00000225655 SPINK8P0C7L1 97 aa11.53□□□□□ -0.56
PFN1-201ENST00000225655 KRTDAPP60985 99 aa11.53□□□□□ -0.56
PFN1-201ENST00000225655 SDIM1Q6ZPB5 146 aa11.53□□□□□ -0.56
PFN1-201ENST00000225655 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.53□□□□□ -0.56
PFN1-201ENST00000225655 CXCL5P42830 114 aa11.52□□□□□ -0.57
PFN1-201ENST00000225655 HIST3H2BBQ8N257 126 aa11.52□□□□□ -0.57
PFN1-201ENST00000225655 LINC00526Q96FQ7 95 aa11.52□□□□□ -0.57
PFN1-201ENST00000225655 AKR1D1P51857 326 aa11.51□□□□□ -0.57
PFN1-201ENST00000225655 COX7B2Q8TF08 81 aa11.51□□□□□ -0.57
PFN1-201ENST00000225655 IGKCP01834 107 aa11.5□□□□□ -0.57
PFN1-201ENST00000225655 RPL37AP61513 92 aaKnown RBP11.5□□□□□ -0.57
PFN1-201ENST00000225655 HERVK_113P61574 105 aa11.5□□□□□ -0.57
PFN1-201ENST00000225655 SNRPEP62304 92 aaKnown RBP11.5□□□□□ -0.57
PFN1-201ENST00000225655 PANO1I0J062 215 aa11.49□□□□□ -0.57
PFN1-201ENST00000225655 OXTP01178 125 aa11.49□□□□□ -0.57
PFN1-201ENST00000225655 C3orf79P0CE67 100 aa11.49□□□□□ -0.57
PFN1-201ENST00000225655 CIRBPQ14011 172 aaKnown RBP11.49□□□□□ -0.57
PFN1-201ENST00000225655 SLPIP03973 132 aa11.48□□□□□ -0.57
PFN1-201ENST00000225655 KIAA0087Q14695 138 aa11.48□□□□□ -0.57
PFN1-201ENST00000225655 RNF151Q2KHN1 245 aa11.48□□□□□ -0.57
PFN1-201ENST00000225655 SFTA2Q6UW10 78 aa11.48□□□□□ -0.57
PFN1-201ENST00000225655 Q6ZRU5 148 aa11.48□□□□□ -0.57
PFN1-201ENST00000225655 HIST1H2BLQ99880 126 aa11.48□□□□□ -0.57
PFN1-201ENST00000225655 PMCHL2Q9BQD1 86 aa11.48□□□□□ -0.57
PFN1-201ENST00000225655 TRBV30A0A0K0K1B3 111 aa11.47□□□□□ -0.57
PFN1-201ENST00000225655 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
PFN1-201ENST00000225655 LINC01545Q5VT33 79 aa11.47□□□□□ -0.57
PFN1-201ENST00000225655 IGLV5-39A0A0G2JS06 123 aa11.46□□□□□ -0.57
PFN1-201ENST00000225655 C5orf52A6NGY3 159 aa11.46□□□□□ -0.57
PFN1-201ENST00000225655 LOC107984640A0A0U1RRK4 108 aa11.44□□□□□ -0.58
PFN1-201ENST00000225655 C2orf82Q6UX34 121 aa11.44□□□□□ -0.58
PFN1-201ENST00000225655 UNQ6190/PRO20217Q6UXQ8 127 aa11.44□□□□□ -0.58
PFN1-201ENST00000225655 LINC00474Q9P2X8 69 aa11.44□□□□□ -0.58
PFN1-201ENST00000225655 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
PFN1-201ENST00000225655 TMA7Q9Y2S6 64 aaKnown RBP11.43□□□□□ -0.58
PFN1-201ENST00000225655 SERTAD4-AS1Q5TG53 156 aa11.42□□□□□ -0.58
PFN1-201ENST00000225655 PLEKHB2Q96CS7 222 aa11.42□□□□□ -0.58
PFN1-201ENST00000225655 LRP1Q07954 4544 aaKnown RBP11.41□□□□□ -0.58
PFN1-201ENST00000225655 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
PFN1-201ENST00000225655 C10orf25Q5T742 122 aa11.41□□□□□ -0.58
PFN1-201ENST00000225655 SPACA4Q8TDM5 124 aa11.41□□□□□ -0.58
PFN1-201ENST00000225655 DPH3Q96FX2 82 aa11.41□□□□□ -0.58
PFN1-201ENST00000225655 C6orf48Q9UBA6 75 aa11.41□□□□□ -0.58
PFN1-201ENST00000225655 CHTF8P0CG12 524 aa11.4□□□□□ -0.58
PFN1-201ENST00000225655 A0A087WYN8 130 aa11.39□□□□□ -0.59
PFN1-201ENST00000225655 LEPROTO15243 131 aa11.39□□□□□ -0.59
PFN1-201ENST00000225655 IGKV2-24A0A0C4DH68 120 aa11.38□□□□□ -0.59
PFN1-201ENST00000225655 LGALS3P17931 250 aaKnown RBP11.38□□□□□ -0.59
PFN1-201ENST00000225655 GAGE2BQ13066 116 aa11.38□□□□□ -0.59
PFN1-201ENST00000225655 PLAC8Q9NZF1 115 aa11.38□□□□□ -0.59
PFN1-201ENST00000225655 NDUFC2-KCTD14E9PQ53 114 aa11.37□□□□□ -0.59
PFN1-201ENST00000225655 TLX1NBP0CAT3 122 aa11.37□□□□□ -0.59
PFN1-201ENST00000225655 MYMXA0A1B0GTQ4 84 aa11.36□□□□□ -0.59
PFN1-201ENST00000225655 E9PLD3 99 aa11.36□□□□□ -0.59
PFN1-201ENST00000225655 NMUP48645 174 aa11.36□□□□□ -0.59
PFN1-201ENST00000225655 PTTG1IPP53801 180 aa11.36□□□□□ -0.59
PFN1-201ENST00000225655 HERV-K104P63124 156 aa11.36□□□□□ -0.59
PFN1-201ENST00000225655 MAJINQ3KP22 176 aa11.36□□□□□ -0.59
PFN1-201ENST00000225655 A0A096LNI7 61 aa11.35□□□□□ -0.59
PFN1-201ENST00000225655 LINC00587B1AMM8 73 aa11.35□□□□□ -0.59
PFN1-201ENST00000225655 J3QQQ9 107 aa11.35□□□□□ -0.59
PFN1-201ENST00000225655 NDUFA12Q9UI09 145 aa11.35□□□□□ -0.59
PFN1-201ENST00000225655 HSBP1L1C9JCN9 74 aa11.34□□□□□ -0.59
PFN1-201ENST00000225655 SCGB1D1O95968 90 aa11.34□□□□□ -0.59
PFN1-201ENST00000225655 C9orf116Q5BN46 136 aaPredicted RBP11.34□□□□□ -0.59
PFN1-201ENST00000225655 COX17Q14061 63 aa11.33□□□□□ -0.6
PFN1-201ENST00000225655 GAGE2EQ4V326 116 aa11.33□□□□□ -0.6
PFN1-201ENST00000225655 STPG4Q8N801 248 aa11.33□□□□□ -0.6
PFN1-201ENST00000225655 ZNF625Q96I27 306 aaPredicted RBP11.33□□□□□ -0.6
PFN1-201ENST00000225655 GAGE2DQ9UEU5 116 aa11.33□□□□□ -0.6
PFN1-201ENST00000225655 ERG28Q9UKR5 140 aa11.33□□□□□ -0.6
PFN1-201ENST00000225655 ATOH7Q8N100 152 aa11.32□□□□□ -0.6
PFN1-201ENST00000225655 C7orf33Q8WU49 177 aa11.32□□□□□ -0.6
PFN1-201ENST00000225655 FAT3Q8TDW7 4589 aa11.32□□□□□ -0.6
PFN1-201ENST00000225655 PFN2P35080 140 aa11.31□□□□□ -0.6
PFN1-201ENST00000225655 MEIG1Q5JSS6 88 aa11.31□□□□□ -0.6
PFN1-201ENST00000225655 Q6ZRP5 223 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 1107.8 ms