RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 CAMK2N2Q96S95 79 aa10.87□□□□□ -0.67
CHMP5-201ENST00000223500 ZNF815PA8K554 130 aa10.87□□□□□ -0.67
CHMP5-201ENST00000223500 COX8AP10176 69 aa10.86□□□□□ -0.67
CHMP5-201ENST00000223500 HERV-K104P63124 156 aa10.86□□□□□ -0.67
CHMP5-201ENST00000223500 PCP2Q8IVA1 136 aa10.86□□□□□ -0.67
CHMP5-201ENST00000223500 FRAS1Q86XX4 4008 aa10.85□□□□□ -0.67
CHMP5-201ENST00000223500 SYCNQ0VAF6 134 aa10.85□□□□□ -0.67
CHMP5-201ENST00000223500 C2orf82Q6UX34 121 aa10.85□□□□□ -0.67
CHMP5-201ENST00000223500 Q8N814 137 aa10.85□□□□□ -0.67
CHMP5-201ENST00000223500 ZNF625Q96I27 306 aaPredicted RBP10.85□□□□□ -0.67
CHMP5-201ENST00000223500 C14orf144Q96I85 54 aa10.85□□□□□ -0.67
CHMP5-201ENST00000223500 TTTY13Q9BZ97 58 aa10.85□□□□□ -0.67
CHMP5-201ENST00000223500 TNP2Q05952 138 aa10.84□□□□□ -0.67
CHMP5-201ENST00000223500 UNQ6190/PRO20217Q6UXQ8 127 aa10.84□□□□□ -0.67
CHMP5-201ENST00000223500 KMT2CQ8NEZ4 4911 aaKnown RBP10.84□□□□□ -0.67
CHMP5-201ENST00000223500 DLEU1O43261 78 aa10.83□□□□□ -0.68
CHMP5-201ENST00000223500 SLC25A34Q6PIV7 304 aa10.83□□□□□ -0.68
CHMP5-201ENST00000223500 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.82□□□□□ -0.68
CHMP5-201ENST00000223500 LINC00587B1AMM8 73 aa10.82□□□□□ -0.68
CHMP5-201ENST00000223500 LINC00336Q6ZUF6 198 aa10.82□□□□□ -0.68
CHMP5-201ENST00000223500 BOD1L2Q8IYS8 172 aa10.82□□□□□ -0.68
CHMP5-201ENST00000223500 CARD19Q96LW7 228 aa10.82□□□□□ -0.68
CHMP5-201ENST00000223500 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.81□□□□□ -0.68
CHMP5-201ENST00000223500 TRBV30A0A0K0K1B3 111 aa10.81□□□□□ -0.68
CHMP5-201ENST00000223500 SCGB1D4Q6XE38 83 aa10.81□□□□□ -0.68
CHMP5-201ENST00000223500 Q6ZRU5 148 aa10.81□□□□□ -0.68
CHMP5-201ENST00000223500 RYR2Q92736 4967 aa10.81□□□□□ -0.68
CHMP5-201ENST00000223500 CNBPP62633 177 aaKnown RBP10.81□□□□□ -0.68
CHMP5-201ENST00000223500 MEIG1Q5JSS6 88 aa10.81□□□□□ -0.68
CHMP5-201ENST00000223500 C10orf25Q5T742 122 aa10.81□□□□□ -0.68
CHMP5-201ENST00000223500 A0A0J9YXY3 114 aa10.8□□□□□ -0.68
CHMP5-201ENST00000223500 CIRBPQ14011 172 aaKnown RBP10.8□□□□□ -0.68
CHMP5-201ENST00000223500 RNF151Q2KHN1 245 aa10.8□□□□□ -0.68
CHMP5-201ENST00000223500 UQCR10Q9UDW1 63 aa10.8□□□□□ -0.68
CHMP5-201ENST00000223500 SLPIP03973 132 aa10.79□□□□□ -0.68
CHMP5-201ENST00000223500 PRO1933Q9H354 126 aa10.79□□□□□ -0.68
CHMP5-201ENST00000223500 C6orf48Q9UBA6 75 aa10.79□□□□□ -0.68
CHMP5-201ENST00000223500 ERG28Q9UKR5 140 aa10.79□□□□□ -0.68
CHMP5-201ENST00000223500 TSTD3H0UI37 97 aa10.78□□□□□ -0.68
CHMP5-201ENST00000223500 COX17Q14061 63 aa10.77□□□□□ -0.69
CHMP5-201ENST00000223500 TIMM17BO60830 172 aa10.76□□□□□ -0.69
CHMP5-201ENST00000223500 LINC00158P58513 81 aa10.76□□□□□ -0.69
CHMP5-201ENST00000223500 SMIM13P0DJ93 91 aa10.75□□□□□ -0.69
CHMP5-201ENST00000223500 PFN2P35080 140 aa10.75□□□□□ -0.69
CHMP5-201ENST00000223500 C9orf116Q5BN46 136 aaPredicted RBP10.75□□□□□ -0.69
CHMP5-201ENST00000223500 PKIGQ9Y2B9 76 aa10.75□□□□□ -0.69
CHMP5-201ENST00000223500 FAT2Q9NYQ8 4349 aa10.75□□□□□ -0.69
CHMP5-201ENST00000223500 TMEM238C9JI98 176 aa10.74□□□□□ -0.69
CHMP5-201ENST00000223500 MIEN1Q9BRT3 115 aa10.74□□□□□ -0.69
CHMP5-201ENST00000223500 A0A0U1RRA0 63 aa10.74□□□□□ -0.69
CHMP5-201ENST00000223500 C9orf163Q8N9P6 203 aa10.74□□□□□ -0.69
CHMP5-201ENST00000223500 HIGD1BQ9P298 99 aa10.74□□□□□ -0.69
CHMP5-201ENST00000223500 TP73-AS1Q9UF72 201 aa10.74□□□□□ -0.69
CHMP5-201ENST00000223500 IGLV5-52A0A0A0MRZ9 124 aa10.73□□□□□ -0.69
CHMP5-201ENST00000223500 NDUFC2-KCTD14E9PQ53 114 aa10.73□□□□□ -0.69
CHMP5-201ENST00000223500 PGPEP1Q9NXJ5 209 aa10.73□□□□□ -0.69
CHMP5-201ENST00000223500 LOC107984640A0A0U1RRK4 108 aa10.72□□□□□ -0.69
CHMP5-201ENST00000223500 TLX1NBP0CAT3 122 aa10.72□□□□□ -0.69
CHMP5-201ENST00000223500 HECTD4Q9Y4D8 3996 aa10.72□□□□□ -0.69
CHMP5-201ENST00000223500 HNRNPA3P51991 378 aaKnown RBP10.71□□□□□ -0.69
CHMP5-201ENST00000223500 DNAH11Q96DT5 4516 aa10.7□□□□□ -0.7
CHMP5-201ENST00000223500 GCSHP23434 173 aa10.7□□□□□ -0.7
CHMP5-201ENST00000223500 SRSF9Q13242 221 aaKnown RBP eCLIP10.7□□□□□ -0.7
CHMP5-201ENST00000223500 C2orf91Q6ZV80 131 aa10.7□□□□□ -0.7
CHMP5-201ENST00000223500 Q6ZVH6 145 aa10.7□□□□□ -0.7
CHMP5-201ENST00000223500 MIR7-3HGQ8N6C7 128 aa10.7□□□□□ -0.7
CHMP5-201ENST00000223500 SPANXB1Q9NS25 103 aaPredicted RBP10.7□□□□□ -0.7
CHMP5-201ENST00000223500 RPL18AQ02543 176 aaKnown RBP10.69□□□□□ -0.7
CHMP5-201ENST00000223500 ADAMTSL4-AS1Q5T5F5 129 aa10.69□□□□□ -0.7
CHMP5-201ENST00000223500 LITAFQ99732 161 aa10.69□□□□□ -0.7
CHMP5-201ENST00000223500 SPANXDQ9BXN6 97 aa10.69□□□□□ -0.7
CHMP5-201ENST00000223500 SPANXCQ9NY87 97 aa10.69□□□□□ -0.7
CHMP5-201ENST00000223500 COPS9Q8WXC6 57 aa10.68□□□□□ -0.7
CHMP5-201ENST00000223500 Q6ZRP5 223 aa10.68□□□□□ -0.7
CHMP5-201ENST00000223500 DAND5Q8N907 189 aa10.68□□□□□ -0.7
CHMP5-201ENST00000223500 HIST1H4GQ99525 98 aa10.68□□□□□ -0.7
CHMP5-201ENST00000223500 IFITM1P13164 125 aa10.67□□□□□ -0.7
CHMP5-201ENST00000223500 FUSP35637 526 aaKnown RBP eCLIP10.67□□□□□ -0.7
CHMP5-201ENST00000223500 KRTAP10-2P60368 255 aa10.67□□□□□ -0.7
CHMP5-201ENST00000223500 GAGE2BQ13066 116 aa10.67□□□□□ -0.7
CHMP5-201ENST00000223500 GAGE2EQ4V326 116 aa10.67□□□□□ -0.7
CHMP5-201ENST00000223500 GAGE2DQ9UEU5 116 aa10.67□□□□□ -0.7
CHMP5-201ENST00000223500 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
CHMP5-201ENST00000223500 PKD1P98161 4303 aa10.65□□□□□ -0.7
CHMP5-201ENST00000223500 TAL2Q16559 108 aa10.65□□□□□ -0.7
CHMP5-201ENST00000223500 SDIM1Q6ZPB5 146 aa10.65□□□□□ -0.7
CHMP5-201ENST00000223500 C16orf90A8MZG2 172 aa10.64□□□□□ -0.71
CHMP5-201ENST00000223500 PTTG1IPP53801 180 aa10.64□□□□□ -0.71
CHMP5-201ENST00000223500 HSD52Q0P140 79 aa10.64□□□□□ -0.71
CHMP5-201ENST00000223500 LINC01620Q4KN68 170 aa10.64□□□□□ -0.71
CHMP5-201ENST00000223500 LINC00308Q8TCZ7 52 aa10.64□□□□□ -0.71
CHMP5-201ENST00000223500 DDTP30046 118 aa10.63□□□□□ -0.71
CHMP5-201ENST00000223500 NPC2P61916 151 aa10.63□□□□□ -0.71
CHMP5-201ENST00000223500 XAGE1AQ9HD64 81 aa10.63□□□□□ -0.71
CHMP5-201ENST00000223500 LINC00474Q9P2X8 69 aa10.63□□□□□ -0.71
CHMP5-201ENST00000223500 RYR3Q15413 4870 aa10.63□□□□□ -0.71
CHMP5-201ENST00000223500 A0A1B0GVY2 172 aa10.62□□□□□ -0.71
CHMP5-201ENST00000223500 MUSTN1Q8IVN3 82 aa10.62□□□□□ -0.71
CHMP5-201ENST00000223500 A0A096LNI7 61 aa10.61□□□□□ -0.71
CHMP5-201ENST00000223500 IGKV2-24A0A0C4DH68 120 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms