RNA–Protein interactions for RNA: ENST00000222256.8

RAB3A-201, Transcript of RAB3A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3A, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-201ENST00000222256 STPG4Q8N801 248 aa13.96□□□□□ -0.17
RAB3A-201ENST00000222256 PKHD1P08F94 4074 aa13.96□□□□□ -0.17
RAB3A-201ENST00000222256 LEPROTO15243 131 aa13.95□□□□□ -0.18
RAB3A-201ENST00000222256 UNQ6190/PRO20217Q6UXQ8 127 aa13.95□□□□□ -0.18
RAB3A-201ENST00000222256 C9orf163Q8N9P6 203 aa13.95□□□□□ -0.18
RAB3A-201ENST00000222256 E9PLD3 99 aa13.95□□□□□ -0.18
RAB3A-201ENST00000222256 JOSD1Q15040 202 aaPredicted RBP13.95□□□□□ -0.18
RAB3A-201ENST00000222256 C10orf25Q5T742 122 aa13.95□□□□□ -0.18
RAB3A-201ENST00000222256 PLEKHB2Q96CS7 222 aa13.95□□□□□ -0.18
RAB3A-201ENST00000222256 DNAH5Q8TE73 4624 aa13.94□□□□□ -0.18
RAB3A-201ENST00000222256 RNF151Q2KHN1 245 aa13.92□□□□□ -0.18
RAB3A-201ENST00000222256 SFTA2Q6UW10 78 aa13.92□□□□□ -0.18
RAB3A-201ENST00000222256 TRBV30A0A0K0K1B3 111 aa13.91□□□□□ -0.18
RAB3A-201ENST00000222256 J3QQQ9 107 aa13.91□□□□□ -0.18
RAB3A-201ENST00000222256 C6orf48Q9UBA6 75 aa13.91□□□□□ -0.18
RAB3A-201ENST00000222256 GCSHP23434 173 aa13.9□□□□□ -0.18
RAB3A-201ENST00000222256 TSPEAR-AS2P59090 65 aa13.9□□□□□ -0.18
RAB3A-201ENST00000222256 LINC01620Q4KN68 170 aa13.9□□□□□ -0.18
RAB3A-201ENST00000222256 ZNF625Q96I27 306 aaPredicted RBP13.9□□□□□ -0.19
RAB3A-201ENST00000222256 C16orf90A8MZG2 172 aa13.89□□□□□ -0.19
RAB3A-201ENST00000222256 HSBP1L1C9JCN9 74 aa13.89□□□□□ -0.19
RAB3A-201ENST00000222256 LGALS3P17931 250 aaKnown RBP13.89□□□□□ -0.19
RAB3A-201ENST00000222256 ANKRD39Q53RE8 183 aa13.89□□□□□ -0.19
RAB3A-201ENST00000222256 MAJINQ3KP22 176 aa13.88□□□□□ -0.19
RAB3A-201ENST00000222256 NDUFA12Q9UI09 145 aa13.88□□□□□ -0.19
RAB3A-201ENST00000222256 IGKV2D-26A0A0A0MRZ7 120 aa13.87□□□□□ -0.19
RAB3A-201ENST00000222256 PYY3Q5JQD4 70 aa13.87□□□□□ -0.19
RAB3A-201ENST00000222256 NMUP48645 174 aa13.86□□□□□ -0.19
RAB3A-201ENST00000222256 SDIM1Q6ZPB5 146 aa13.86□□□□□ -0.19
RAB3A-201ENST00000222256 PKIGQ9Y2B9 76 aa13.86□□□□□ -0.19
RAB3A-201ENST00000222256 MYMXA0A1B0GTQ4 84 aa13.85□□□□□ -0.19
RAB3A-201ENST00000222256 C9orf116Q5BN46 136 aaPredicted RBP13.85□□□□□ -0.19
RAB3A-201ENST00000222256 HERV-K104P63124 156 aa13.85□□□□□ -0.19
RAB3A-201ENST00000222256 LOC107984640A0A0U1RRK4 108 aa13.84□□□□□ -0.19
RAB3A-201ENST00000222256 TLX1NBP0CAT3 122 aa13.84□□□□□ -0.19
RAB3A-201ENST00000222256 DYNC1H1Q14204 4646 aaKnown RBP13.83□□□□□ -0.2
RAB3A-201ENST00000222256 KRTAP10-1P60331 282 aa13.83□□□□□ -0.2
RAB3A-201ENST00000222256 EPPK1P58107 5090 aaKnown RBP13.83□□□□□ -0.2
RAB3A-201ENST00000222256 NDUFC2-KCTD14E9PQ53 114 aa13.81□□□□□ -0.2
RAB3A-201ENST00000222256 ERG28Q9UKR5 140 aa13.8□□□□□ -0.2
RAB3A-201ENST00000222256 LRP1BQ9NZR2 4599 aa13.8□□□□□ -0.2
RAB3A-201ENST00000222256 LOC105371267A0A1B0GV96 52 aa13.8□□□□□ -0.2
RAB3A-201ENST00000222256 RPL18AQ02543 176 aaKnown RBP13.8□□□□□ -0.2
RAB3A-201ENST00000222256 COX17Q14061 63 aa13.8□□□□□ -0.2
RAB3A-201ENST00000222256 VAMP8Q9BV40 100 aa13.8□□□□□ -0.2
RAB3A-201ENST00000222256 ZNF815PA8K554 130 aa13.79□□□□□ -0.2
RAB3A-201ENST00000222256 Q6ZRP5 223 aa13.79□□□□□ -0.2
RAB3A-201ENST00000222256 TTTY13Q9BZ97 58 aa13.79□□□□□ -0.2
RAB3A-201ENST00000222256 A0A096LNI7 61 aa13.78□□□□□ -0.2
RAB3A-201ENST00000222256 LINC00587B1AMM8 73 aa13.78□□□□□ -0.2
RAB3A-201ENST00000222256 PFN2P35080 140 aa13.77□□□□□ -0.21
RAB3A-201ENST00000222256 PTTG1IPP53801 180 aa13.77□□□□□ -0.21
RAB3A-201ENST00000222256 GAGE2BQ13066 116 aa13.77□□□□□ -0.21
RAB3A-201ENST00000222256 PAM16Q9Y3D7 125 aa13.77□□□□□ -0.21
RAB3A-201ENST00000222256 MEIG1Q5JSS6 88 aa13.76□□□□□ -0.21
RAB3A-201ENST00000222256 PCP2Q8IVA1 136 aa13.76□□□□□ -0.21
RAB3A-201ENST00000222256 IGKV2-24A0A0C4DH68 120 aa13.75□□□□□ -0.21
RAB3A-201ENST00000222256 Q6ZSA8 131 aa13.75□□□□□ -0.21
RAB3A-201ENST00000222256 LINC00474Q9P2X8 69 aa13.75□□□□□ -0.21
RAB3A-201ENST00000222256 A0A0J9YXY3 114 aa13.74□□□□□ -0.21
RAB3A-201ENST00000222256 CHTF8P0CG12 524 aa13.74□□□□□ -0.21
RAB3A-201ENST00000222256 GAGE2EQ4V326 116 aa13.74□□□□□ -0.21
RAB3A-201ENST00000222256 SPATA45Q537H7 98 aa13.74□□□□□ -0.21
RAB3A-201ENST00000222256 GAGE2DQ9UEU5 116 aa13.74□□□□□ -0.21
RAB3A-201ENST00000222256 SMIM13P0DJ93 91 aa13.74□□□□□ -0.21
RAB3A-201ENST00000222256 LINC00158P58513 81 aa13.74□□□□□ -0.21
RAB3A-201ENST00000222256 FAM30AQ9NZY2 134 aa13.74□□□□□ -0.21
RAB3A-201ENST00000222256 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.74□□□□□ -0.21
RAB3A-201ENST00000222256 DNAH8Q96JB1 4490 aa13.73□□□□□ -0.21
RAB3A-201ENST00000222256 CIRBPQ14011 172 aaKnown RBP13.73□□□□□ -0.21
RAB3A-201ENST00000222256 A0A0U1RRA0 63 aa13.72□□□□□ -0.21
RAB3A-201ENST00000222256 PANO1I0J062 215 aa13.72□□□□□ -0.21
RAB3A-201ENST00000222256 SPACA4Q8TDM5 124 aa13.72□□□□□ -0.21
RAB3A-201ENST00000222256 SMIM6P0DI80 62 aa13.69□□□□□ -0.22
RAB3A-201ENST00000222256 COX8AP10176 69 aa13.69□□□□□ -0.22
RAB3A-201ENST00000222256 SCGB1D4Q6XE38 83 aa13.69□□□□□ -0.22
RAB3A-201ENST00000222256 DPH3Q96FX2 82 aa13.69□□□□□ -0.22
RAB3A-201ENST00000222256 XAGE1AQ9HD64 81 aa13.69□□□□□ -0.22
RAB3A-201ENST00000222256 TIMM17BO60830 172 aa13.69□□□□□ -0.22
RAB3A-201ENST00000222256 S100A12P80511 92 aa13.69□□□□□ -0.22
RAB3A-201ENST00000222256 C9orf129Q5T035 196 aaKnown RBP13.68□□□□□ -0.22
RAB3A-201ENST00000222256 BOD1L2Q8IYS8 172 aa13.68□□□□□ -0.22
RAB3A-201ENST00000222256 MIR7-3HGQ8N6C7 128 aa13.68□□□□□ -0.22
RAB3A-201ENST00000222256 SND1-IT1Q9HBX3 110 aa13.68□□□□□ -0.22
RAB3A-201ENST00000222256 C14orf144Q96I85 54 aa13.66□□□□□ -0.22
RAB3A-201ENST00000222256 A0A087WYN8 130 aa13.65□□□□□ -0.22
RAB3A-201ENST00000222256 DLEU1O43261 78 aa13.65□□□□□ -0.22
RAB3A-201ENST00000222256 LITAFQ99732 161 aa13.65□□□□□ -0.22
RAB3A-201ENST00000222256 ADAMTSL4-AS1Q5T5F5 129 aa13.64□□□□□ -0.23
RAB3A-201ENST00000222256 APOBP04114 4563 aaKnown RBP13.64□□□□□ -0.23
RAB3A-201ENST00000222256 SCXQ7RTU7 201 aa13.64□□□□□ -0.23
RAB3A-201ENST00000222256 DAND5Q8N907 189 aa13.64□□□□□ -0.23
RAB3A-201ENST00000222256 CIRBP-AS1Q8TBR5 109 aa13.64□□□□□ -0.23
RAB3A-201ENST00000222256 TMEM238C9JI98 176 aa13.63□□□□□ -0.23
RAB3A-201ENST00000222256 PLAC8Q9NZF1 115 aa13.63□□□□□ -0.23
RAB3A-201ENST00000222256 A0A1W2PNN7 141 aa13.62□□□□□ -0.23
RAB3A-201ENST00000222256 XGP55808 180 aa13.62□□□□□ -0.23
RAB3A-201ENST00000222256 SLC25A34Q6PIV7 304 aa13.62□□□□□ -0.23
RAB3A-201ENST00000222256 FAM168BA1KXE4 195 aa13.61□□□□□ -0.23
RAB3A-201ENST00000222256 CDK2AP2O75956 126 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms